RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 PLA2G6O60733 806 aa14.9□□□□□ -0.02
COL6A3-207ENST00000433762 FAM13AO94988 1023 aa14.9□□□□□ -0.02
COL6A3-207ENST00000433762 GCNT3O95395 438 aa14.9□□□□□ -0.02
COL6A3-207ENST00000433762 ACTN1P12814 892 aa14.9□□□□□ -0.02
COL6A3-207ENST00000433762 GNGT1P63211 74 aa14.9□□□□□ -0.02
COL6A3-207ENST00000433762 ARID5AQ03989 594 aa14.9□□□□□ -0.02
COL6A3-207ENST00000433762 TCEAL1Q15170 157 aa14.9□□□□□ -0.02
COL6A3-207ENST00000433762 DOK7Q18PE1 504 aa14.9□□□□□ -0.02
COL6A3-207ENST00000433762 B4GALNT4Q76KP1 1039 aa14.9□□□□□ -0.02
COL6A3-207ENST00000433762 SH3BP5LQ7L8J4 393 aa14.9□□□□□ -0.02
COL6A3-207ENST00000433762 ARFGAP2Q8N6H7 521 aa14.9□□□□□ -0.02
COL6A3-207ENST00000433762 NEK9Q8TD19 979 aa14.9□□□□□ -0.02
COL6A3-207ENST00000433762 PIK3R5Q8WYR1 880 aa14.9□□□□□ -0.02
COL6A3-207ENST00000433762 HES6Q96HZ4 224 aa14.9□□□□□ -0.02
COL6A3-207ENST00000433762 RUSC1Q9BVN2 902 aa14.9□□□□□ -0.02
COL6A3-207ENST00000433762 DMAC2Q9NW81 257 aa14.9□□□□□ -0.02
COL6A3-207ENST00000433762 GGA2Q9UJY4 613 aa14.9□□□□□ -0.02
COL6A3-207ENST00000433762 ZNF233A6NK53 670 aa14.89□□□□□ -0.03
COL6A3-207ENST00000433762 TGFB1I1O43294 461 aa14.89□□□□□ -0.03
COL6A3-207ENST00000433762 PSMD10O75832 226 aa14.89□□□□□ -0.03
COL6A3-207ENST00000433762 TMEM253P0C7T8 217 aa14.89□□□□□ -0.03
COL6A3-207ENST00000433762 SOX5P35711 763 aa14.89□□□□□ -0.03
COL6A3-207ENST00000433762 HADHBP55084 474 aaKnown RBP14.89□□□□□ -0.03
COL6A3-207ENST00000433762 EN1Q05925 392 aaPredicted RBP14.89□□□□□ -0.03
COL6A3-207ENST00000433762 PEX26Q7Z412 305 aa14.89□□□□□ -0.03
COL6A3-207ENST00000433762 C10orf67Q8IYJ2 551 aa14.89□□□□□ -0.03
COL6A3-207ENST00000433762 FAM186BQ8IYM0 893 aa14.89□□□□□ -0.03
COL6A3-207ENST00000433762 C3orf20Q8ND61 904 aa14.89□□□□□ -0.03
COL6A3-207ENST00000433762 ARL8AQ96BM9 186 aa14.89□□□□□ -0.03
COL6A3-207ENST00000433762 ATP6V1G3Q96LB4 118 aa14.89□□□□□ -0.03
COL6A3-207ENST00000433762 SYT11Q9BT88 431 aa14.89□□□□□ -0.03
COL6A3-207ENST00000433762 WDR11Q9BZH6 1224 aa14.89□□□□□ -0.03
COL6A3-207ENST00000433762 DEFB129Q9H1M3 183 aa14.89□□□□□ -0.03
COL6A3-207ENST00000433762 PARVGQ9HBI0 331 aa14.89□□□□□ -0.03
COL6A3-207ENST00000433762 HERC5Q9UII4 1024 aaKnown RBP14.89□□□□□ -0.03
COL6A3-207ENST00000433762 RGPD3A6NKT7 1758 aaPredicted RBP14.89□□□□□ -0.03
COL6A3-207ENST00000433762 RGPD4Q7Z3J3 1758 aa14.89□□□□□ -0.03
COL6A3-207ENST00000433762 SETQ01105 290 aaPredicted RBP14.89□□□□□ -0.03
COL6A3-207ENST00000433762 BIRC3Q13489 604 aa14.89□□□□□ -0.03
COL6A3-207ENST00000433762 ALCAMQ13740 583 aa14.89□□□□□ -0.03
COL6A3-207ENST00000433762 DCAF17Q5H9S7 520 aaPredicted RBP14.89□□□□□ -0.03
COL6A3-207ENST00000433762 RBM26Q5T8P6 1007 aaKnown RBP14.89□□□□□ -0.03
COL6A3-207ENST00000433762 OTOP1Q7RTM1 612 aa14.89□□□□□ -0.03
COL6A3-207ENST00000433762 MAATS1Q7Z4T9 603 aa14.89□□□□□ -0.03
COL6A3-207ENST00000433762 FLAD1Q8NFF5 587 aa14.89□□□□□ -0.03
COL6A3-207ENST00000433762 CCDC26Q8TAB7 109 aa14.89□□□□□ -0.03
COL6A3-207ENST00000433762 RFFLQ8WZ73 363 aa14.89□□□□□ -0.03
COL6A3-207ENST00000433762 NAP1L3Q99457 506 aaPredicted RBP14.89□□□□□ -0.03
COL6A3-207ENST00000433762 DDX3XO00571 662 aaKnown RBP eCLIP14.88□□□□□ -0.03
COL6A3-207ENST00000433762 MAPTP10636 758 aaKnown RBP14.88□□□□□ -0.03
COL6A3-207ENST00000433762 ZNF76P36508 570 aa14.88□□□□□ -0.03
COL6A3-207ENST00000433762 NOP2P46087 812 aaKnown RBP14.88□□□□□ -0.03
COL6A3-207ENST00000433762 HS2ST1Q7LGA3 356 aa14.88□□□□□ -0.03
COL6A3-207ENST00000433762 NT5DC3Q86UY8 548 aa14.88□□□□□ -0.03
COL6A3-207ENST00000433762 BCAS4Q8TDM0 211 aa14.88□□□□□ -0.03
COL6A3-207ENST00000433762 AKT1S1Q96B36 256 aa14.88□□□□□ -0.03
COL6A3-207ENST00000433762 NACC1Q96RE7 527 aa14.88□□□□□ -0.03
COL6A3-207ENST00000433762 F8VZ95 297 aa14.88□□□□□ -0.03
COL6A3-207ENST00000433762 MEIS1O00470 390 aa14.88□□□□□ -0.03
COL6A3-207ENST00000433762 FAM153BP0C7A2 387 aa14.88□□□□□ -0.03
COL6A3-207ENST00000433762 GUCY2CP25092 1073 aa14.88□□□□□ -0.03
COL6A3-207ENST00000433762 FMO5P49326 533 aa14.88□□□□□ -0.03
COL6A3-207ENST00000433762 PRELPP51888 382 aa14.88□□□□□ -0.03
COL6A3-207ENST00000433762 FAM153CQ494X1 144 aa14.88□□□□□ -0.03
COL6A3-207ENST00000433762 METTL13Q8N6R0 699 aa14.88□□□□□ -0.03
COL6A3-207ENST00000433762 IFT81Q8WYA0 676 aa14.88□□□□□ -0.03
COL6A3-207ENST00000433762 CAMKK2Q96RR4 588 aa14.88□□□□□ -0.03
COL6A3-207ENST00000433762 EFCC1Q9HA90 598 aa14.88□□□□□ -0.03
COL6A3-207ENST00000433762 FAM114A2Q9NRY5 505 aa14.88□□□□□ -0.03
COL6A3-207ENST00000433762 FAM153AQ9UHL3 310 aa14.88□□□□□ -0.03
COL6A3-207ENST00000433762 PRR12Q9ULL5 1215 aa14.88□□□□□ -0.03
COL6A3-207ENST00000433762 NOC2LQ9Y3T9 749 aaKnown RBP14.88□□□□□ -0.03
COL6A3-207ENST00000433762 GOLGA6L10A6NI86 522 aa14.87□□□□□ -0.03
COL6A3-207ENST00000433762 EML1O00423 815 aa14.87□□□□□ -0.03
COL6A3-207ENST00000433762 TRIM66O15016 1216 aa14.87□□□□□ -0.03
COL6A3-207ENST00000433762 P4HA2O15460 535 aa14.87□□□□□ -0.03
COL6A3-207ENST00000433762 CEP104O60308 925 aa14.87□□□□□ -0.03
COL6A3-207ENST00000433762 ECHS1P30084 290 aa14.87□□□□□ -0.03
COL6A3-207ENST00000433762 MCCD1P59942 119 aaPredicted RBP14.87□□□□□ -0.03
COL6A3-207ENST00000433762 TCERG1LQ5VWI1 586 aa14.87□□□□□ -0.03
COL6A3-207ENST00000433762 STYK1Q6J9G0 422 aa14.87□□□□□ -0.03
COL6A3-207ENST00000433762 RUFY4Q6ZNE9 571 aa14.87□□□□□ -0.03
COL6A3-207ENST00000433762 OLIG1Q8TAK6 271 aa14.87□□□□□ -0.03
COL6A3-207ENST00000433762 TMBIM4Q9HC24 238 aa14.87□□□□□ -0.03
COL6A3-207ENST00000433762 ARHGEF10LQ9HCE6 1279 aa14.87□□□□□ -0.03
COL6A3-207ENST00000433762 AMFRQ9UKV5 643 aa14.87□□□□□ -0.03
COL6A3-207ENST00000433762 PCDHB13Q9Y5F0 798 aa14.87□□□□□ -0.03
COL6A3-207ENST00000433762 RSPH10B2B2RC85 870 aa14.87□□□□□ -0.03
COL6A3-207ENST00000433762 SART1O43290 800 aaKnown RBP14.87□□□□□ -0.03
COL6A3-207ENST00000433762 SLITRK3O94933 977 aa14.87□□□□□ -0.03
COL6A3-207ENST00000433762 RSPH10BP0C881 870 aa14.87□□□□□ -0.03
COL6A3-207ENST00000433762 NR1D1P20393 614 aa14.87□□□□□ -0.03
COL6A3-207ENST00000433762 CASP4P49662 377 aa14.87□□□□□ -0.03
COL6A3-207ENST00000433762 STAT2P52630 851 aa14.87□□□□□ -0.03
COL6A3-207ENST00000433762 ERVK-9P63128 1117 aa14.87□□□□□ -0.03
COL6A3-207ENST00000433762 AGBL2Q5U5Z8 902 aa14.87□□□□□ -0.03
COL6A3-207ENST00000433762 LRCH2Q5VUJ6 765 aa14.87□□□□□ -0.03
COL6A3-207ENST00000433762 B3GNT9Q6UX72 402 aa14.87□□□□□ -0.03
COL6A3-207ENST00000433762 ZNF720Q7Z2F6 126 aa14.87□□□□□ -0.03
COL6A3-207ENST00000433762 YTHDF3Q7Z739 585 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms