RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 PTGISQ16647 500 aa12.23□□□□□ -0.45
CHD4-202ENST00000430771 MTHFD1LQ6UB35 978 aa12.23□□□□□ -0.45
CHD4-202ENST00000430771 SLC39A5Q6ZMH5 540 aa12.23□□□□□ -0.45
CHD4-202ENST00000430771 KRBA2Q6ZNG9 492 aa12.23□□□□□ -0.45
CHD4-202ENST00000430771 FMR1NBQ8N0W7 255 aaPredicted RBP12.23□□□□□ -0.45
CHD4-202ENST00000430771 CCDC155Q8N6L0 562 aa12.23□□□□□ -0.45
CHD4-202ENST00000430771 LRRC15Q8TF66 581 aa12.23□□□□□ -0.45
CHD4-202ENST00000430771 TRAPPC12Q8WVT3 735 aa12.23□□□□□ -0.45
CHD4-202ENST00000430771 TCP11Q8WWU5 503 aa12.23□□□□□ -0.45
CHD4-202ENST00000430771 TIGD1Q96MW7 591 aa12.23□□□□□ -0.45
CHD4-202ENST00000430771 DHX33Q9H6R0 707 aaKnown RBP12.23□□□□□ -0.45
CHD4-202ENST00000430771 BMP2KQ9NSY1 1161 aaPredicted RBP12.23□□□□□ -0.45
CHD4-202ENST00000430771 SERTAD1Q9UHV2 236 aa12.23□□□□□ -0.45
CHD4-202ENST00000430771 TRIP12Q14669 1992 aaPredicted RBP12.22□□□□□ -0.45
CHD4-202ENST00000430771 SMIM35A0A1B0GVV1 85 aa12.22□□□□□ -0.45
CHD4-202ENST00000430771 ZBTB39O15060 712 aa12.22□□□□□ -0.45
CHD4-202ENST00000430771 PQBP1O60828 265 aaKnown RBP12.22□□□□□ -0.45
CHD4-202ENST00000430771 TBCAO75347 108 aaKnown RBP12.22□□□□□ -0.45
CHD4-202ENST00000430771 NR1I2O75469 434 aa12.22□□□□□ -0.45
CHD4-202ENST00000430771 CYP2C9P11712 490 aa12.22□□□□□ -0.45
CHD4-202ENST00000430771 LIG1P18858 919 aa12.22□□□□□ -0.45
CHD4-202ENST00000430771 GUCY2CP25092 1073 aa12.22□□□□□ -0.45
CHD4-202ENST00000430771 DNM2P50570 870 aa12.22□□□□□ -0.45
CHD4-202ENST00000430771 ATN1P54259 1190 aaPredicted RBP12.22□□□□□ -0.45
CHD4-202ENST00000430771 ADAM17P78536 824 aa12.22□□□□□ -0.45
CHD4-202ENST00000430771 DHX8Q14562 1220 aaKnown RBP12.22□□□□□ -0.45
CHD4-202ENST00000430771 GDF6Q6KF10 455 aaPredicted RBP12.22□□□□□ -0.45
CHD4-202ENST00000430771 RINT1Q6NUQ1 792 aa12.22□□□□□ -0.45
CHD4-202ENST00000430771 RSPH3Q86UC2 560 aa12.22□□□□□ -0.45
CHD4-202ENST00000430771 FAM126BQ8IXS8 530 aa12.22□□□□□ -0.45
CHD4-202ENST00000430771 METTL13Q8N6R0 699 aa12.22□□□□□ -0.45
CHD4-202ENST00000430771 ENGASEQ8NFI3 743 aa12.22□□□□□ -0.45
CHD4-202ENST00000430771 DRC1Q96MC2 740 aa12.22□□□□□ -0.45
CHD4-202ENST00000430771 CEP89Q96ST8 783 aa12.22□□□□□ -0.45
CHD4-202ENST00000430771 SH2D3AQ9BRG2 576 aa12.22□□□□□ -0.45
CHD4-202ENST00000430771 RUSC1Q9BVN2 902 aa12.22□□□□□ -0.45
CHD4-202ENST00000430771 KBTBD4Q9NVX7 518 aa12.22□□□□□ -0.45
CHD4-202ENST00000430771 ODF2LQ9ULJ1 636 aa12.22□□□□□ -0.45
CHD4-202ENST00000430771 PCDHA2Q9Y5H9 948 aa12.22□□□□□ -0.45
CHD4-202ENST00000430771 A0A087WWV3 80 aa12.21□□□□□ -0.45
CHD4-202ENST00000430771 IGKV6-21A0A0C4DH24 114 aa12.21□□□□□ -0.45
CHD4-202ENST00000430771 DCDC2CA8MYV0 355 aa12.21□□□□□ -0.45
CHD4-202ENST00000430771 TREHO43280 583 aa12.21□□□□□ -0.45
CHD4-202ENST00000430771 B4GALT4O60513 344 aa12.21□□□□□ -0.45
CHD4-202ENST00000430771 CAND2O75155 1236 aa12.21□□□□□ -0.45
CHD4-202ENST00000430771 CYP11B2P19099 503 aa12.21□□□□□ -0.45
CHD4-202ENST00000430771 KLRC1P26715 233 aa12.21□□□□□ -0.45
CHD4-202ENST00000430771 CDK7P50613 346 aa12.21□□□□□ -0.45
CHD4-202ENST00000430771 RTP1P59025 263 aa12.21□□□□□ -0.45
CHD4-202ENST00000430771 PTK7Q13308 1070 aa12.21□□□□□ -0.45
CHD4-202ENST00000430771 SNW1Q13573 536 aaKnown RBP12.21□□□□□ -0.45
CHD4-202ENST00000430771 TRIM60Q495X7 471 aa12.21□□□□□ -0.45
CHD4-202ENST00000430771 EFCAB12Q6NXP0 572 aa12.21□□□□□ -0.45
CHD4-202ENST00000430771 C1orf186Q6ZWK4 172 aa12.21□□□□□ -0.45
CHD4-202ENST00000430771 ANKRD33Q7Z3H0 272 aa12.21□□□□□ -0.45
CHD4-202ENST00000430771 UBE2Q1Q7Z7E8 422 aa12.21□□□□□ -0.45
CHD4-202ENST00000430771 SERINC5Q86VE9 423 aa12.21□□□□□ -0.45
CHD4-202ENST00000430771 ZNF710Q8N1W2 664 aa12.21□□□□□ -0.45
CHD4-202ENST00000430771 CAGE1Q8TC20 777 aa12.21□□□□□ -0.45
CHD4-202ENST00000430771 PPP1R13LQ8WUF5 828 aa12.21□□□□□ -0.45
CHD4-202ENST00000430771 PSPC1Q8WXF1 523 aaKnown RBP12.21□□□□□ -0.45
CHD4-202ENST00000430771 KIFAP3Q92845 792 aa12.21□□□□□ -0.45
CHD4-202ENST00000430771 TOX2Q96NM4 488 aa12.21□□□□□ -0.45
CHD4-202ENST00000430771 HTATIP2Q9BUP3 242 aa12.21□□□□□ -0.45
CHD4-202ENST00000430771 POLR3FQ9H1D9 316 aaPredicted RBP12.21□□□□□ -0.45
CHD4-202ENST00000430771 XPNPEP1Q9NQW7 623 aa12.21□□□□□ -0.45
CHD4-202ENST00000430771 TRMT13Q9NUP7 481 aaKnown RBP12.21□□□□□ -0.45
CHD4-202ENST00000430771 DACT1Q9NYF0 836 aa12.21□□□□□ -0.45
CHD4-202ENST00000430771 ALPK3Q96L96 1907 aa12.21□□□□□ -0.46
CHD4-202ENST00000430771 EVPLQ92817 2033 aa12.2□□□□□ -0.46
CHD4-202ENST00000430771 M0QZ92 97 aa12.2□□□□□ -0.46
CHD4-202ENST00000430771 GTPBP6O43824 516 aaPredicted RBP12.2□□□□□ -0.46
CHD4-202ENST00000430771 FAM13AO94988 1023 aa12.2□□□□□ -0.46
CHD4-202ENST00000430771 AFMP43652 599 aa12.2□□□□□ -0.46
CHD4-202ENST00000430771 CLCN3P51790 818 aa12.2□□□□□ -0.46
CHD4-202ENST00000430771 ASIC1P78348 528 aa12.2□□□□□ -0.46
CHD4-202ENST00000430771 DMP1Q13316 513 aaPredicted RBP12.2□□□□□ -0.46
CHD4-202ENST00000430771 POSTNQ15063 836 aa12.2□□□□□ -0.46
CHD4-202ENST00000430771 PPP2R5AQ15172 486 aa12.2□□□□□ -0.46
CHD4-202ENST00000430771 LONRF3Q496Y0 759 aa12.2□□□□□ -0.46
CHD4-202ENST00000430771 MARCH8Q5T0T0 291 aa12.2□□□□□ -0.46
CHD4-202ENST00000430771 FAM102BQ5T8I3 360 aa12.2□□□□□ -0.46
CHD4-202ENST00000430771 IER5Q5VY09 327 aa12.2□□□□□ -0.46
CHD4-202ENST00000430771 ELOA2Q8IYF1 753 aaPredicted RBP12.2□□□□□ -0.46
CHD4-202ENST00000430771 LRRC71Q8N4P6 559 aa12.2□□□□□ -0.46
CHD4-202ENST00000430771 LINC01465Q8N7H1 131 aa12.2□□□□□ -0.46
CHD4-202ENST00000430771 DDX12PQ92771 950 aa12.2□□□□□ -0.46
CHD4-202ENST00000430771 CCDC47Q96A33 483 aaKnown RBP12.2□□□□□ -0.46
CHD4-202ENST00000430771 SYAP1Q96A49 352 aaPredicted RBP12.2□□□□□ -0.46
CHD4-202ENST00000430771 PAGE5Q96GU1 130 aa12.2□□□□□ -0.46
CHD4-202ENST00000430771 REEP2Q9BRK0 252 aa12.2□□□□□ -0.46
CHD4-202ENST00000430771 TRIM9Q9C026 710 aa12.2□□□□□ -0.46
CHD4-202ENST00000430771 FAM49AQ9H0Q0 323 aaPredicted RBP12.2□□□□□ -0.46
CHD4-202ENST00000430771 SUGCTQ9HAC7 445 aa12.2□□□□□ -0.46
CHD4-202ENST00000430771 AKT3Q9Y243 479 aa12.2□□□□□ -0.46
CHD4-202ENST00000430771 ATP11BQ9Y2G3 1177 aa12.2□□□□□ -0.46
CHD4-202ENST00000430771 BRCA2P51587 3418 aa12.2□□□□□ -0.46
CHD4-202ENST00000430771 MYMKA6NI61 221 aa12.19□□□□□ -0.46
CHD4-202ENST00000430771 HIP1RO75146 1068 aa12.19□□□□□ -0.46
CHD4-202ENST00000430771 CD4P01730 458 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms