RNA–Protein interactions for RNA: ENST00000430548.5

AC004540.1-202, humanhuman

TSL 4

Gene AC004540.1, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-202ENST00000430548 KIZQ2M2Z5 673 aa21.12■□□□□ 0.97
AC004540.1-202ENST00000430548 BRF1Q92994 677 aa21.12■□□□□ 0.97
AC004540.1-202ENST00000430548 ELAC1Q9H777 363 aaKnown RBP21.12■□□□□ 0.97
AC004540.1-202ENST00000430548 TMEM161AQ9NX61 479 aa21.12■□□□□ 0.97
AC004540.1-202ENST00000430548 CEP131Q9UPN4 1083 aa21.12■□□□□ 0.97
AC004540.1-202ENST00000430548 PCDHGC5Q9Y5F6 944 aa21.12■□□□□ 0.97
AC004540.1-202ENST00000430548 PCDHA10Q9Y5I2 948 aa21.12■□□□□ 0.97
AC004540.1-202ENST00000430548 PSAPP07602 524 aa21.11■□□□□ 0.97
AC004540.1-202ENST00000430548 GNA11P29992 359 aa21.11■□□□□ 0.97
AC004540.1-202ENST00000430548 HSPA4P34932 840 aa21.11■□□□□ 0.97
AC004540.1-202ENST00000430548 NRIP1P48552 1158 aa21.11■□□□□ 0.97
AC004540.1-202ENST00000430548 FAM189BP81408 668 aa21.11■□□□□ 0.97
AC004540.1-202ENST00000430548 NTRK3Q16288 839 aa21.11■□□□□ 0.97
AC004540.1-202ENST00000430548 Q6ZUG5 572 aa21.11■□□□□ 0.97
AC004540.1-202ENST00000430548 FAM167AQ96KS9 214 aa21.11■□□□□ 0.97
AC004540.1-202ENST00000430548 RNF26Q9BY78 433 aaPredicted RBP21.11■□□□□ 0.97
AC004540.1-202ENST00000430548 KCNH6Q9H252 994 aa21.11■□□□□ 0.97
AC004540.1-202ENST00000430548 HCSTQ9UBK5 93 aa21.11■□□□□ 0.97
AC004540.1-202ENST00000430548 PCDHB12Q9Y5F1 795 aa21.11■□□□□ 0.97
AC004540.1-202ENST00000430548 FSD2A1L4K1 749 aa21.1■□□□□ 0.97
AC004540.1-202ENST00000430548 TBKBP1A7MCY6 615 aa21.1■□□□□ 0.97
AC004540.1-202ENST00000430548 FSCN2O14926 492 aa21.1■□□□□ 0.97
AC004540.1-202ENST00000430548 EDIL3O43854 480 aa21.1■□□□□ 0.97
AC004540.1-202ENST00000430548 VTNP04004 478 aa21.1■□□□□ 0.97
AC004540.1-202ENST00000430548 FAM102BQ5T8I3 360 aa21.1■□□□□ 0.97
AC004540.1-202ENST00000430548 RNF135Q8IUD6 432 aa21.1■□□□□ 0.97
AC004540.1-202ENST00000430548 COLGALT1Q8NBJ5 622 aa21.1■□□□□ 0.97
AC004540.1-202ENST00000430548 CWH43Q9H720 699 aa21.1■□□□□ 0.97
AC004540.1-202ENST00000430548 TLR9Q9NR96 1032 aa21.1■□□□□ 0.97
AC004540.1-202ENST00000430548 AAASQ9NRG9 546 aa21.1■□□□□ 0.97
AC004540.1-202ENST00000430548 MUTYHQ9UIF7 546 aa21.1■□□□□ 0.97
AC004540.1-202ENST00000430548 BARX2Q9UMQ3 279 aaPredicted RBP21.1■□□□□ 0.97
AC004540.1-202ENST00000430548 SNX14Q9Y5W7 946 aa21.1■□□□□ 0.97
AC004540.1-202ENST00000430548 MAGEB2O15479 319 aa21.09■□□□□ 0.97
AC004540.1-202ENST00000430548 FGF18O76093 207 aa21.09■□□□□ 0.97
AC004540.1-202ENST00000430548 CLCN3P51790 818 aa21.09■□□□□ 0.97
AC004540.1-202ENST00000430548 FGD1P98174 961 aa21.09■□□□□ 0.97
AC004540.1-202ENST00000430548 CBX2Q14781 532 aaPredicted RBP21.09■□□□□ 0.97
AC004540.1-202ENST00000430548 PRR16Q569H4 304 aa21.09■□□□□ 0.97
AC004540.1-202ENST00000430548 CKAP2LQ8IYA6 745 aa21.09■□□□□ 0.97
AC004540.1-202ENST00000430548 CCDC148Q8NFR7 591 aa21.09■□□□□ 0.97
AC004540.1-202ENST00000430548 RASGRP4Q8TDF6 673 aa21.09■□□□□ 0.97
AC004540.1-202ENST00000430548 JAKMIP1Q96N16 626 aaKnown RBP21.09■□□□□ 0.97
AC004540.1-202ENST00000430548 UIMC1Q96RL1 719 aa21.09■□□□□ 0.97
AC004540.1-202ENST00000430548 PPP1R16BQ96T49 567 aa21.09■□□□□ 0.97
AC004540.1-202ENST00000430548 CDCA3Q99618 268 aaPredicted RBP21.09■□□□□ 0.97
AC004540.1-202ENST00000430548 RNF19AQ9NV58 838 aa21.09■□□□□ 0.97
AC004540.1-202ENST00000430548 GABBR1Q9UBS5 961 aa21.09■□□□□ 0.97
AC004540.1-202ENST00000430548 TCEAL9Q9UHQ7 104 aa21.09■□□□□ 0.97
AC004540.1-202ENST00000430548 NAP1L2Q9ULW6 460 aaPredicted RBP21.09■□□□□ 0.97
AC004540.1-202ENST00000430548 LZTS1Q9Y250 596 aa21.09■□□□□ 0.97
AC004540.1-202ENST00000430548 ARID2Q68CP9 1835 aa21.08■□□□□ 0.97
AC004540.1-202ENST00000430548 WDR64B1ANS9 1081 aa21.08■□□□□ 0.97
AC004540.1-202ENST00000430548 LOC730098B7Z3J9 87 aa21.08■□□□□ 0.97
AC004540.1-202ENST00000430548 ZNF862O60290 1169 aa21.08■□□□□ 0.97
AC004540.1-202ENST00000430548 FGFR1P11362 822 aa21.08■□□□□ 0.97
AC004540.1-202ENST00000430548 LAG3P18627 525 aa21.08■□□□□ 0.97
AC004540.1-202ENST00000430548 EVCP57679 992 aa21.08■□□□□ 0.97
AC004540.1-202ENST00000430548 DUSP6Q16828 381 aa21.08■□□□□ 0.97
AC004540.1-202ENST00000430548 BLOC1S2Q6QNY1 142 aa21.08■□□□□ 0.97
AC004540.1-202ENST00000430548 HFE2Q6ZVN8 426 aa21.08■□□□□ 0.97
AC004540.1-202ENST00000430548 ZNF710Q8N1W2 664 aa21.08■□□□□ 0.97
AC004540.1-202ENST00000430548 VN1R2Q8NFZ6 395 aa21.08■□□□□ 0.97
AC004540.1-202ENST00000430548 BICD2Q8TD16 824 aa21.08■□□□□ 0.97
AC004540.1-202ENST00000430548 PHKBQ93100 1093 aa21.08■□□□□ 0.97
AC004540.1-202ENST00000430548 ADAMTS10Q9H324 1103 aa21.08■□□□□ 0.97
AC004540.1-202ENST00000430548 TYW1Q9NV66 732 aaKnown RBP21.08■□□□□ 0.97
AC004540.1-202ENST00000430548 USP15Q9Y4E8 981 aaPredicted RBP21.08■□□□□ 0.97
AC004540.1-202ENST00000430548 OATP04181 439 aa21.07■□□□□ 0.96
AC004540.1-202ENST00000430548 IFNAR1P17181 557 aa21.07■□□□□ 0.96
AC004540.1-202ENST00000430548 RPS6KB1P23443 525 aa21.07■□□□□ 0.96
AC004540.1-202ENST00000430548 PLCB3Q01970 1234 aa21.07■□□□□ 0.96
AC004540.1-202ENST00000430548 KCNC3Q14003 757 aa21.07■□□□□ 0.96
AC004540.1-202ENST00000430548 PDE12Q6L8Q7 609 aaKnown RBP21.07■□□□□ 0.96
AC004540.1-202ENST00000430548 RBM23Q86U06 439 aaKnown RBP21.07■□□□□ 0.96
AC004540.1-202ENST00000430548 METTL13Q8N6R0 699 aa21.07■□□□□ 0.96
AC004540.1-202ENST00000430548 TMEM117Q9H0C3 514 aa21.07■□□□□ 0.96
AC004540.1-202ENST00000430548 ATP6V0A4Q9HBG4 840 aa21.07■□□□□ 0.96
AC004540.1-202ENST00000430548 MSH4O15457 936 aa21.06■□□□□ 0.96
AC004540.1-202ENST00000430548 IBSPP21815 317 aaPredicted RBP21.06■□□□□ 0.96
AC004540.1-202ENST00000430548 ERVFC1P60507 584 aa21.06■□□□□ 0.96
AC004540.1-202ENST00000430548 PRKCEQ02156 737 aa21.06■□□□□ 0.96
AC004540.1-202ENST00000430548 SPOUT1Q5T280 376 aaKnown RBP21.06■□□□□ 0.96
AC004540.1-202ENST00000430548 THNSL1Q8IYQ7 743 aa21.06■□□□□ 0.96
AC004540.1-202ENST00000430548 SUSD6Q92537 303 aa21.06■□□□□ 0.96
AC004540.1-202ENST00000430548 MAP7D2Q96T17 732 aa21.06■□□□□ 0.96
AC004540.1-202ENST00000430548 RIT2Q99578 217 aa21.06■□□□□ 0.96
AC004540.1-202ENST00000430548 TLE6Q9H808 572 aa21.06■□□□□ 0.96
AC004540.1-202ENST00000430548 DENND4AQ7Z401 1863 aa21.06■□□□□ 0.96
AC004540.1-202ENST00000430548 HOXA2O43364 376 aa21.05■□□□□ 0.96
AC004540.1-202ENST00000430548 PPFIA3O75145 1194 aa21.05■□□□□ 0.96
AC004540.1-202ENST00000430548 ATF7P17544 494 aaPredicted RBP21.05■□□□□ 0.96
AC004540.1-202ENST00000430548 EIF4BP23588 611 aaKnown RBP21.05■□□□□ 0.96
AC004540.1-202ENST00000430548 NLRP11P59045 1033 aaKnown RBP21.05■□□□□ 0.96
AC004540.1-202ENST00000430548 UGCGQ16739 394 aa21.05■□□□□ 0.96
AC004540.1-202ENST00000430548 EFCAB12Q6NXP0 572 aa21.05■□□□□ 0.96
AC004540.1-202ENST00000430548 TMEM184AQ6ZMB5 413 aa21.05■□□□□ 0.96
AC004540.1-202ENST00000430548 LRRC55Q6ZSA7 311 aa21.05■□□□□ 0.96
AC004540.1-202ENST00000430548 LRRC43Q8N309 656 aa21.05■□□□□ 0.96
AC004540.1-202ENST00000430548 LRRC71Q8N4P6 559 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms