RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 AJAP1Q9UKB5 411 aaPredicted RBP16.36■□□□□ 0.21
LINC00839-202ENST00000429940 ATP8B3O60423 1300 aa16.36■□□□□ 0.21
LINC00839-202ENST00000429940 MEIS1O00470 390 aa16.35■□□□□ 0.21
LINC00839-202ENST00000429940 PDXKO00764 312 aa16.35■□□□□ 0.21
LINC00839-202ENST00000429940 TTI1O43156 1089 aa16.35■□□□□ 0.21
LINC00839-202ENST00000429940 TRAPPC3O43617 180 aa16.35■□□□□ 0.21
LINC00839-202ENST00000429940 TMOD1P28289 359 aa16.35■□□□□ 0.21
LINC00839-202ENST00000429940 JAM2P57087 298 aa16.35■□□□□ 0.21
LINC00839-202ENST00000429940 PSMC6P62333 389 aa16.35■□□□□ 0.21
LINC00839-202ENST00000429940 PPP2R2AP63151 447 aa16.35■□□□□ 0.21
LINC00839-202ENST00000429940 PABPC4Q13310 644 aaKnown RBP eCLIP16.35■□□□□ 0.21
LINC00839-202ENST00000429940 AGBL2Q5U5Z8 902 aa16.35■□□□□ 0.21
LINC00839-202ENST00000429940 C6orf89Q6UWU4 347 aa16.35■□□□□ 0.21
LINC00839-202ENST00000429940 EPM2AIP1Q7L775 607 aaPredicted RBP16.35■□□□□ 0.21
LINC00839-202ENST00000429940 TMC3Q7Z5M5 1100 aa16.35■□□□□ 0.21
LINC00839-202ENST00000429940 CCDC91Q7Z6B0 441 aa16.35■□□□□ 0.21
LINC00839-202ENST00000429940 SP8Q8IXZ3 490 aa16.35■□□□□ 0.21
LINC00839-202ENST00000429940 ANO3Q9BYT9 981 aa16.35■□□□□ 0.21
LINC00839-202ENST00000429940 SIX2Q9NPC8 291 aa16.35■□□□□ 0.21
LINC00839-202ENST00000429940 GCNT4Q9P109 453 aa16.35■□□□□ 0.21
LINC00839-202ENST00000429940 PLCB4Q15147 1175 aa16.35■□□□□ 0.21
LINC00839-202ENST00000429940 NT5DC3Q86UY8 548 aa16.35■□□□□ 0.21
LINC00839-202ENST00000429940 CCDC13Q8IYE1 715 aa16.35■□□□□ 0.21
LINC00839-202ENST00000429940 C3orf20Q8ND61 904 aa16.35■□□□□ 0.21
LINC00839-202ENST00000429940 U2AF1L4Q8WU68 220 aaKnown RBP16.35■□□□□ 0.21
LINC00839-202ENST00000429940 METTL14Q9HCE5 456 aaKnown RBP16.35■□□□□ 0.21
LINC00839-202ENST00000429940 DDX20Q9UHI6 824 aaKnown RBP16.35■□□□□ 0.21
LINC00839-202ENST00000429940 NOVA2Q9UNW9 492 aaKnown RBP16.35■□□□□ 0.21
LINC00839-202ENST00000429940 DNM3Q9UQ16 869 aa16.35■□□□□ 0.21
LINC00839-202ENST00000429940 UTP11Q9Y3A2 253 aaKnown RBP16.35■□□□□ 0.21
LINC00839-202ENST00000429940 CYP3A7-CYP3A51PA0A087WV96 503 aa16.34■□□□□ 0.21
LINC00839-202ENST00000429940 MPHOSPH10O00566 681 aaKnown RBP16.34■□□□□ 0.21
LINC00839-202ENST00000429940 DDX3XO00571 662 aaKnown RBP eCLIP16.34■□□□□ 0.21
LINC00839-202ENST00000429940 NR3C1P04150 777 aa16.34■□□□□ 0.21
LINC00839-202ENST00000429940 DPEP1P16444 411 aa16.34■□□□□ 0.21
LINC00839-202ENST00000429940 CYP3A7P24462 503 aa16.34■□□□□ 0.21
LINC00839-202ENST00000429940 DRP2Q13474 957 aa16.34■□□□□ 0.21
LINC00839-202ENST00000429940 GJB7Q6PEY0 223 aa16.34■□□□□ 0.21
LINC00839-202ENST00000429940 CCDC121Q6ZUS5 278 aa16.34■□□□□ 0.21
LINC00839-202ENST00000429940 SYT2Q8N9I0 419 aaPredicted RBP16.34■□□□□ 0.21
LINC00839-202ENST00000429940 ERMNQ8TAM6 284 aa16.34■□□□□ 0.21
LINC00839-202ENST00000429940 CELF4Q9BZC1 486 aaKnown RBP16.34■□□□□ 0.21
LINC00839-202ENST00000429940 GLT8D2Q9H1C3 349 aa16.34■□□□□ 0.21
LINC00839-202ENST00000429940 SERPINB13Q9UIV8 391 aa16.34■□□□□ 0.21
LINC00839-202ENST00000429940 INTUQ9ULD6 942 aa16.34■□□□□ 0.21
LINC00839-202ENST00000429940 KCNA3P22001 575 aa16.34■□□□□ 0.21
LINC00839-202ENST00000429940 DHX9Q08211 1270 aaKnown RBP16.34■□□□□ 0.21
LINC00839-202ENST00000429940 SLC35C1Q96A29 364 aa16.34■□□□□ 0.21
LINC00839-202ENST00000429940 HES6Q96HZ4 224 aa16.34■□□□□ 0.21
LINC00839-202ENST00000429940 NCAPGQ9BPX3 1015 aa16.34■□□□□ 0.21
LINC00839-202ENST00000429940 MXD3Q9BW11 206 aa16.34■□□□□ 0.21
LINC00839-202ENST00000429940 MTFR1LQ9H019 292 aa16.34■□□□□ 0.21
LINC00839-202ENST00000429940 DPH5Q9H2P9 285 aa16.34■□□□□ 0.21
LINC00839-202ENST00000429940 DDX4Q9NQI0 724 aaKnown RBP16.34■□□□□ 0.21
LINC00839-202ENST00000429940 FAM114A2Q9NRY5 505 aa16.34■□□□□ 0.21
LINC00839-202ENST00000429940 TYW1Q9NV66 732 aaKnown RBP16.34■□□□□ 0.21
LINC00839-202ENST00000429940 GEMIN8Q9NWZ8 242 aaKnown RBP16.34■□□□□ 0.21
LINC00839-202ENST00000429940 CNOT8Q9UFF9 292 aaKnown RBP16.34■□□□□ 0.21
LINC00839-202ENST00000429940 PCDHA1Q9Y5I3 950 aa16.34■□□□□ 0.21
LINC00839-202ENST00000429940 SLC16A3O15427 465 aaKnown RBP16.33■□□□□ 0.2
LINC00839-202ENST00000429940 GFPT2O94808 682 aa16.33■□□□□ 0.2
LINC00839-202ENST00000429940 FERP16591 822 aa16.33■□□□□ 0.2
LINC00839-202ENST00000429940 RPL13P26373 211 aaKnown RBP16.33■□□□□ 0.2
LINC00839-202ENST00000429940 CASP4P49662 377 aa16.33■□□□□ 0.2
LINC00839-202ENST00000429940 NPEPPSP55786 919 aa16.33■□□□□ 0.2
LINC00839-202ENST00000429940 SPIRE1Q08AE8 756 aa16.33■□□□□ 0.2
LINC00839-202ENST00000429940 QRICH1Q2TAL8 776 aa16.33■□□□□ 0.2
LINC00839-202ENST00000429940 KRT71Q3SY84 523 aa16.33■□□□□ 0.2
LINC00839-202ENST00000429940 PRR16Q569H4 304 aa16.33■□□□□ 0.2
LINC00839-202ENST00000429940 SEC14L1Q92503 715 aa16.33■□□□□ 0.2
LINC00839-202ENST00000429940 MBOAT7Q96N66 472 aa16.33■□□□□ 0.2
LINC00839-202ENST00000429940 AMFRQ9UKV5 643 aa16.33■□□□□ 0.2
LINC00839-202ENST00000429940 ASTN1O14525 1302 aa16.33■□□□□ 0.2
LINC00839-202ENST00000429940 C10orf71Q711Q0 1435 aa16.33■□□□□ 0.2
LINC00839-202ENST00000429940 C21orf2O43822 256 aa16.33■□□□□ 0.2
LINC00839-202ENST00000429940 RAD21O60216 631 aa16.33■□□□□ 0.2
LINC00839-202ENST00000429940 SHMT1P34896 483 aa16.33■□□□□ 0.2
LINC00839-202ENST00000429940 SMTNP53814 917 aa16.33■□□□□ 0.2
LINC00839-202ENST00000429940 GALCP54803 685 aa16.33■□□□□ 0.2
LINC00839-202ENST00000429940 MAGOHP61326 146 aaKnown RBP16.33■□□□□ 0.2
LINC00839-202ENST00000429940 PDE4CQ08493 712 aa16.33■□□□□ 0.2
LINC00839-202ENST00000429940 QPCTQ16769 361 aa16.33■□□□□ 0.2
LINC00839-202ENST00000429940 MAGOHBQ96A72 148 aaKnown RBP16.33■□□□□ 0.2
LINC00839-202ENST00000429940 DCDC2CA8MYV0 355 aa16.32■□□□□ 0.2
LINC00839-202ENST00000429940 RSPH10B2B2RC85 870 aa16.32■□□□□ 0.2
LINC00839-202ENST00000429940 F8VZ95 297 aa16.32■□□□□ 0.2
LINC00839-202ENST00000429940 GCNT3O95395 438 aa16.32■□□□□ 0.2
LINC00839-202ENST00000429940 FGGP02679 453 aa16.32■□□□□ 0.2
LINC00839-202ENST00000429940 RSPH10BP0C881 870 aa16.32■□□□□ 0.2
LINC00839-202ENST00000429940 SPATA31C1P0DKV0 1188 aa16.32■□□□□ 0.2
LINC00839-202ENST00000429940 RPA1P27694 616 aa16.32■□□□□ 0.2
LINC00839-202ENST00000429940 ETNPPLQ8TBG4 499 aa16.32■□□□□ 0.2
LINC00839-202ENST00000429940 RAPGEF5Q92565 580 aa16.32■□□□□ 0.2
LINC00839-202ENST00000429940 MYCBPQ99417 103 aaPredicted RBP16.32■□□□□ 0.2
LINC00839-202ENST00000429940 ACTR5Q9H9F9 607 aaPredicted RBP16.32■□□□□ 0.2
LINC00839-202ENST00000429940 PCDHB13Q9Y5F0 798 aa16.32■□□□□ 0.2
LINC00839-202ENST00000429940 GOLGA6L7A0A1B0GV03 622 aa16.31■□□□□ 0.2
LINC00839-202ENST00000429940 F8W031 263 aaPredicted RBP16.31■□□□□ 0.2
LINC00839-202ENST00000429940 CLIC2O15247 247 aa16.31■□□□□ 0.2
LINC00839-202ENST00000429940 PAEPP09466 180 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms