RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 MXI1P50539 228 aa9.59□□□□□ -0.87
CTNND1-208ENST00000428599 FOXD4Q12950 439 aaPredicted RBP9.59□□□□□ -0.87
CTNND1-208ENST00000428599 ZC3H12BQ5HYM0 836 aaKnown RBP9.59□□□□□ -0.87
CTNND1-208ENST00000428599 ANKS3Q6ZW76 656 aa9.59□□□□□ -0.87
CTNND1-208ENST00000428599 ERICH1Q86X53 443 aa9.59□□□□□ -0.87
CTNND1-208ENST00000428599 PDCD6IPQ8WUM4 868 aaKnown RBP9.59□□□□□ -0.87
CTNND1-208ENST00000428599 TDRD3Q9H7E2 651 aaKnown RBP9.59□□□□□ -0.87
CTNND1-208ENST00000428599 EPN1Q9Y6I3 576 aaPredicted RBP9.59□□□□□ -0.87
CTNND1-208ENST00000428599 ZC3H13Q5T200 1668 aaKnown RBP9.59□□□□□ -0.87
CTNND1-208ENST00000428599 DLC1Q96QB1 1528 aa9.59□□□□□ -0.87
CTNND1-208ENST00000428599 UBN2Q6ZU65 1347 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 NBPF26B4DH59 902 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 CLIC2O15247 247 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 PYGBP11216 843 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 HADHAP40939 763 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 PHKA2P46019 1235 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 ZNF667Q5HYK9 610 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 RASIP1Q5U651 963 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 TWF2Q6IBS0 349 aaKnown RBP9.58□□□□□ -0.88
CTNND1-208ENST00000428599 CYP4F22Q6NT55 531 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 NBPF10Q6P3W6 841 aaKnown RBP9.58□□□□□ -0.88
CTNND1-208ENST00000428599 PODNQ7Z5L7 613 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 NBPF15Q8N660 670 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 ZNF341Q9BYN7 854 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 SUDS3Q9H7L9 328 aaPredicted RBP9.58□□□□□ -0.88
CTNND1-208ENST00000428599 SYNDIG1Q9H7V2 258 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 GCNT4Q9P109 453 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 LCMT1Q9UIC8 334 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 PLEKHG2Q9H7P9 1386 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 MOCS3O95396 460 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 DDIT3P35638 169 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 GABPB1Q06547 395 aaPredicted RBP9.58□□□□□ -0.88
CTNND1-208ENST00000428599 CAPRIN1Q14444 709 aaKnown RBP9.58□□□□□ -0.88
CTNND1-208ENST00000428599 C10orf76Q5T2E6 689 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 TRMT10CQ7L0Y3 403 aaKnown RBP9.58□□□□□ -0.88
CTNND1-208ENST00000428599 EFHBQ8N7U6 833 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 P2RX5Q93086 422 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 ASIC4Q96FT7 647 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 FOXP1Q9H334 677 aaPredicted RBP9.58□□□□□ -0.88
CTNND1-208ENST00000428599 HOXC10Q9NYD6 342 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 STX18Q9P2W9 335 aaKnown RBP9.58□□□□□ -0.88
CTNND1-208ENST00000428599 CYP2E1P05181 493 aaPredicted RBP9.58□□□□□ -0.88
CTNND1-208ENST00000428599 NCF2P19878 526 aaPredicted RBP9.58□□□□□ -0.88
CTNND1-208ENST00000428599 GPSM2P81274 684 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 PSMD2Q13200 908 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 ACCSLQ4AC99 568 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 TBC1D19Q8N5T2 526 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 CCDC197Q8NCU1 140 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 BEST2Q8NFU1 509 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 TBCKQ8TEA7 893 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 HSPH1Q92598 858 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 ULK4Q96C45 1275 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 PCDHA7Q9UN72 937 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 KIDINS220Q9ULH0 1771 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 ARL4DP49703 201 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 SLMAPQ14BN4 828 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 STXBP2Q15833 593 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 MAN2A1Q16706 1144 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 KRT80Q6KB66 452 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 NSUN7Q8NE18 718 aaKnown RBP9.58□□□□□ -0.88
CTNND1-208ENST00000428599 AFG1LQ8WV93 481 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 GSDMAQ96QA5 445 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 STRBPQ96SI9 672 aaKnown RBP9.58□□□□□ -0.88
CTNND1-208ENST00000428599 CENPKQ9BS16 269 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 CHCHD3Q9NX63 227 aaKnown RBP9.58□□□□□ -0.88
CTNND1-208ENST00000428599 RNF181Q9P0P0 153 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 PNPLA6Q8IY17 1366 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 CCDC151A5D8V7 595 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 IPO5O00410 1097 aaKnown RBP9.58□□□□□ -0.88
CTNND1-208ENST00000428599 GH2P01242 217 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 MYL1P05976 194 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 PSMA2P25787 234 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 VEPH1Q14D04 833 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 KLC2Q9H0B6 622 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 MYO3AQ8NEV4 1616 aa9.58□□□□□ -0.88
CTNND1-208ENST00000428599 PGRMC1O00264 195 aaKnown RBP9.57□□□□□ -0.88
CTNND1-208ENST00000428599 MYO1DO94832 1006 aa9.57□□□□□ -0.88
CTNND1-208ENST00000428599 EEF1DP29692 281 aaKnown RBP9.57□□□□□ -0.88
CTNND1-208ENST00000428599 CDO1Q16878 200 aa9.57□□□□□ -0.88
CTNND1-208ENST00000428599 ZNF827Q17R98 1081 aa9.57□□□□□ -0.88
CTNND1-208ENST00000428599 PDXDC1Q6P996 788 aa9.57□□□□□ -0.88
CTNND1-208ENST00000428599 LCA5Q86VQ0 697 aa9.57□□□□□ -0.88
CTNND1-208ENST00000428599 PBXIP1Q96AQ6 731 aa9.57□□□□□ -0.88
CTNND1-208ENST00000428599 TRAIPQ9BWF2 469 aa9.57□□□□□ -0.88
CTNND1-208ENST00000428599 MEIS1O00470 390 aa9.57□□□□□ -0.88
CTNND1-208ENST00000428599 CLTAP09496 248 aa9.57□□□□□ -0.88
CTNND1-208ENST00000428599 EIF2AK2P19525 551 aaKnown RBP9.57□□□□□ -0.88
CTNND1-208ENST00000428599 PKP1Q13835 747 aa9.57□□□□□ -0.88
CTNND1-208ENST00000428599 LBRQ14739 615 aaKnown RBP9.57□□□□□ -0.88
CTNND1-208ENST00000428599 SLFNL1Q499Z3 407 aa9.57□□□□□ -0.88
CTNND1-208ENST00000428599 HABP4Q5JVS0 413 aaKnown RBP9.57□□□□□ -0.88
CTNND1-208ENST00000428599 TMEM179Q6ZVK1 233 aa9.57□□□□□ -0.88
CTNND1-208ENST00000428599 EPAS1Q99814 870 aa9.57□□□□□ -0.88
CTNND1-208ENST00000428599 BRIP1Q9BX63 1249 aa9.57□□□□□ -0.88
CTNND1-208ENST00000428599 ATP6V0A4Q9HBG4 840 aa9.57□□□□□ -0.88
CTNND1-208ENST00000428599 STRIP2Q9ULQ0 834 aa9.57□□□□□ -0.88
CTNND1-208ENST00000428599 ADAMTS13Q76LX8 1427 aa9.57□□□□□ -0.88
CTNND1-208ENST00000428599 E5RI56 91 aa9.57□□□□□ -0.88
CTNND1-208ENST00000428599 CYP2D6P10635 497 aa9.57□□□□□ -0.88
CTNND1-208ENST00000428599 CACNB1Q02641 598 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms