RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 SNX2O60749 519 aa10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 RPS6KA5O75582 802 aa10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 GFPT2O94808 682 aa10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 ADORA2BP29275 332 aa10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 GLB1LQ6UWU2 654 aa10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 LZICQ8WZA0 190 aa10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 TEX13BQ9BXU2 312 aa10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 VGLL3A8MV65 326 aa10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 KIF3CO14782 793 aa10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 HSPA6P17066 643 aa10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 RGS2P41220 211 aa10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 RASSF2P50749 326 aa10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 SLC15A2Q16348 729 aa10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 SGO2Q562F6 1265 aa10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 STRIP1Q5VSL9 837 aa10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 TRIM67Q6ZTA4 783 aa10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 B4GALNT4Q76KP1 1039 aa10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 RNF168Q8IYW5 571 aaPredicted RBP10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 TRIM45Q9H8W5 580 aaPredicted RBP10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 OGFRQ9NZT2 677 aa10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 PCDHB8Q9UN66 801 aa10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 SCINQ9Y6U3 715 aa10.67□□□□□ -0.7
CLTCL1-202ENST00000427926 BRD1O95696 1058 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 STAG3L1P0CL83 205 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 CYP2D6P10635 497 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 CYP19A1P11511 503 aaPredicted RBP10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 RPS12P25398 132 aaKnown RBP10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 CACNB2Q08289 660 aaPredicted RBP10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 SNX17Q15036 470 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 MEI1Q5TIA1 1274 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 TBC1D19Q8N5T2 526 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 MYRIPQ8NFW9 859 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 NEK9Q8TD19 979 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 MAGEB5Q9BZ81 275 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 ZSWIM6Q9HCJ5 1215 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 SLC9A2Q9UBY0 812 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 SH3BP1Q9Y3L3 701 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 A6NNZ2 444 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 SFI1A8K8P3 1242 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 INPP1P49441 399 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 TUBB8Q3ZCM7 444 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 GLYCTKQ8IVS8 523 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 TTC39CQ8N584 583 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 PDZD8Q8NEN9 1154 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 FBXO18Q8NFZ0 1043 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 GSDMAQ96QA5 445 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 CRAMP1Q96RY5 1269 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 STAP2Q9UGK3 403 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 GADD45BO75293 160 aaPredicted RBP10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 PCK1P35558 622 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 PRKCQQ04759 706 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 CCDC15Q0P6D6 951 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 SF3A3Q12874 501 aaKnown RBP eCLIP10.66□□□□□ -0.73e-8■■■■■ 54.4
CLTCL1-202ENST00000427926 SNX1Q13596 522 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 MAN2A1Q16706 1144 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 TKFCQ3LXA3 575 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 TMCO4Q5TGY1 634 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 TEKT4Q8WW24 435 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 MAGOHBQ96A72 148 aaKnown RBP10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 CARD6Q9BX69 1037 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 E5RI56 91 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 SH2B2O14492 632 aaPredicted RBP10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 PPP1R12AO14974 1030 aaPredicted RBP10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 CREB3O43889 395 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 QARSP47897 775 aaKnown RBP10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 CPT1AP50416 773 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 RASSF7Q02833 373 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 SCRN1Q12765 414 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 GBP7Q8N8V2 638 aaPredicted RBP10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 FAM213AQ9BRX8 229 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 TMEM63CQ9P1W3 806 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 CLIC4Q9Y696 253 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 CDC42BPAQ5VT25 1732 aa10.66□□□□□ -0.7
CLTCL1-202ENST00000427926 M0QYV0 167 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 TTI1O43156 1089 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 SLC25A27O95847 323 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 LRG1P02750 347 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 P4HBP07237 508 aaKnown RBP10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 STAT5BP51692 787 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 PSMC5P62195 406 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 RSBN1LQ6PCB5 846 aaPredicted RBP10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 KSR1Q8IVT5 923 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 MB21D1Q8N884 522 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 ARRDC4Q8NCT1 418 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 UHMK1Q8TAS1 419 aaKnown RBP10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 CENPKQ9BS16 269 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 XPO4Q9C0E2 1151 aaKnown RBP10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 ZSWIM5Q9P217 1185 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 ZBTB12Q9Y330 459 aaPredicted RBP10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 SLC16A4O15374 487 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 DNAJC6O75061 913 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 COPB1P53618 953 aaKnown RBP10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 EHHADHQ08426 723 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 DEFB132Q7Z7B7 95 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 SRRM1Q8IYB3 904 aaKnown RBP10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 STKLD1Q8NE28 680 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 DEPDC1BQ8WUY9 529 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 TMEM47Q9BQJ4 181 aa10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 SARS2Q9NP81 518 aaKnown RBP10.65□□□□□ -0.7
CLTCL1-202ENST00000427926 CDC42BPGQ6DT37 1551 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms