RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 ADCY3O60266 1144 aa13.35□□□□□ -0.27
RFC4-206ENST00000427785 GCNT3O95395 438 aa13.35□□□□□ -0.27
RFC4-206ENST00000427785 HMGCRP04035 888 aa13.35□□□□□ -0.27
RFC4-206ENST00000427785 HOXD8P13378 290 aaPredicted RBP13.35□□□□□ -0.27
RFC4-206ENST00000427785 PRKAR2AP13861 404 aaKnown RBP13.35□□□□□ -0.27
RFC4-206ENST00000427785 HOXD10P28358 340 aa13.35□□□□□ -0.27
RFC4-206ENST00000427785 CNGA1P29973 690 aa13.35□□□□□ -0.27
RFC4-206ENST00000427785 CCND3P30281 292 aaPredicted RBP13.35□□□□□ -0.27
RFC4-206ENST00000427785 NMT1P30419 496 aaKnown RBP13.35□□□□□ -0.27
RFC4-206ENST00000427785 DEKP35659 375 aaKnown RBP13.35□□□□□ -0.27
RFC4-206ENST00000427785 C1QTNF8P60827 252 aa13.35□□□□□ -0.27
RFC4-206ENST00000427785 BEX3Q00994 111 aa13.35□□□□□ -0.27
RFC4-206ENST00000427785 CACNB2Q08289 660 aaPredicted RBP13.35□□□□□ -0.27
RFC4-206ENST00000427785 PSMD2Q13200 908 aa13.35□□□□□ -0.27
RFC4-206ENST00000427785 COBLL1Q53SF7 1204 aa13.35□□□□□ -0.27
RFC4-206ENST00000427785 ODR4Q5SWX8 454 aa13.35□□□□□ -0.27
RFC4-206ENST00000427785 NELFCDQ8IXH7 590 aa13.35□□□□□ -0.27
RFC4-206ENST00000427785 RAET1EQ8TD07 263 aa13.35□□□□□ -0.27
RFC4-206ENST00000427785 TRAPPC12Q8WVT3 735 aa13.35□□□□□ -0.27
RFC4-206ENST00000427785 BBXQ8WY36 941 aaPredicted RBP13.35□□□□□ -0.27
RFC4-206ENST00000427785 BSNDQ8WZ55 320 aa13.35□□□□□ -0.27
RFC4-206ENST00000427785 P2RX5Q93086 422 aa13.35□□□□□ -0.27
RFC4-206ENST00000427785 DRC1Q96MC2 740 aa13.35□□□□□ -0.27
RFC4-206ENST00000427785 GTPBP4Q9BZE4 634 aaKnown RBP13.35□□□□□ -0.27
RFC4-206ENST00000427785 POLR3FQ9H1D9 316 aaPredicted RBP13.35□□□□□ -0.27
RFC4-206ENST00000427785 HSD3B7Q9H2F3 369 aa13.35□□□□□ -0.27
RFC4-206ENST00000427785 MRPL44Q9H9J2 332 aaKnown RBP13.35□□□□□ -0.27
RFC4-206ENST00000427785 NRBP1Q9UHY1 535 aa13.35□□□□□ -0.27
RFC4-206ENST00000427785 RWDD2AQ9UIY3 292 aa13.35□□□□□ -0.27
RFC4-206ENST00000427785 MYADML2A6NDP7 307 aa13.34□□□□□ -0.27
RFC4-206ENST00000427785 DGAT1O75907 488 aa13.34□□□□□ -0.27
RFC4-206ENST00000427785 TPM4P67936 248 aa13.34□□□□□ -0.27
RFC4-206ENST00000427785 MAP2K1Q02750 393 aaPredicted RBP13.34□□□□□ -0.27
RFC4-206ENST00000427785 TARBP2Q15633 366 aaKnown RBP13.34□□□□□ -0.27
RFC4-206ENST00000427785 DGKDQ16760 1214 aa13.34□□□□□ -0.27
RFC4-206ENST00000427785 FAM178BQ8IXR5 827 aa13.34□□□□□ -0.27
RFC4-206ENST00000427785 MYOCDQ8IZQ8 938 aa13.34□□□□□ -0.27
RFC4-206ENST00000427785 GUF1Q8N442 669 aaKnown RBP13.34□□□□□ -0.27
RFC4-206ENST00000427785 MCPH1Q8NEM0 835 aa13.34□□□□□ -0.27
RFC4-206ENST00000427785 ENOX1Q8TC92 643 aaKnown RBP13.34□□□□□ -0.27
RFC4-206ENST00000427785 SCFD1Q8WVM8 642 aa13.34□□□□□ -0.27
RFC4-206ENST00000427785 DHTKD1Q96HY7 919 aaPredicted RBP13.34□□□□□ -0.27
RFC4-206ENST00000427785 FIZ1Q96SL8 496 aa13.34□□□□□ -0.27
RFC4-206ENST00000427785 CEP89Q96ST8 783 aa13.34□□□□□ -0.27
RFC4-206ENST00000427785 C16orf70Q9BSU1 422 aa13.34□□□□□ -0.27
RFC4-206ENST00000427785 BEGAINQ9BUH8 593 aa13.34□□□□□ -0.27
RFC4-206ENST00000427785 TIPINQ9BVW5 301 aa13.34□□□□□ -0.27
RFC4-206ENST00000427785 NIFKQ9BYG3 293 aaKnown RBP13.34□□□□□ -0.27
RFC4-206ENST00000427785 AP5M1Q9H0R1 490 aa13.34□□□□□ -0.27
RFC4-206ENST00000427785 OLFML3Q9NRN5 406 aa13.34□□□□□ -0.27
RFC4-206ENST00000427785 NRBP2Q9NSY0 501 aa13.34□□□□□ -0.27
RFC4-206ENST00000427785 FANCLQ9NW38 375 aa13.34□□□□□ -0.27
RFC4-206ENST00000427785 ERAP1Q9NZ08 941 aa13.34□□□□□ -0.27
RFC4-206ENST00000427785 SEL1LQ9UBV2 794 aa13.34□□□□□ -0.27
RFC4-206ENST00000427785 ZNF215Q9UL58 517 aaPredicted RBP13.34□□□□□ -0.27
RFC4-206ENST00000427785 ZMYM2Q9UBW7 1377 aa13.33□□□□□ -0.27
RFC4-206ENST00000427785 ZBTB42B2RXF5 422 aa13.33□□□□□ -0.28
RFC4-206ENST00000427785 PRPF6O94906 941 aaKnown RBP13.33□□□□□ -0.28
RFC4-206ENST00000427785 MYL3P08590 195 aa13.33□□□□□ -0.28
RFC4-206ENST00000427785 ATP1A3P13637 1013 aa13.33□□□□□ -0.28
RFC4-206ENST00000427785 PLS3P13797 630 aa13.33□□□□□ -0.28
RFC4-206ENST00000427785 CCNE1P24864 410 aa13.33□□□□□ -0.28
RFC4-206ENST00000427785 RFC5P40937 340 aa13.33□□□□□ -0.28
RFC4-206ENST00000427785 PPP1R2P41236 205 aa13.33□□□□□ -0.28
RFC4-206ENST00000427785 SLC26A2P50443 739 aa13.33□□□□□ -0.28
RFC4-206ENST00000427785 CHMP4BP1P59074 171 aa13.33□□□□□ -0.28
RFC4-206ENST00000427785 IGBP1P78318 339 aa13.33□□□□□ -0.28
RFC4-206ENST00000427785 TBC1D8BQ0IIM8 1120 aa13.33□□□□□ -0.28
RFC4-206ENST00000427785 TPD52L1Q16890 204 aaPredicted RBP13.33□□□□□ -0.28
RFC4-206ENST00000427785 ZC2HC1CQ53FD0 456 aaPredicted RBP13.33□□□□□ -0.28
RFC4-206ENST00000427785 CT47A1Q5JQC4 288 aaPredicted RBP13.33□□□□□ -0.28
RFC4-206ENST00000427785 SPATA1Q5VX52 437 aa13.33□□□□□ -0.28
RFC4-206ENST00000427785 TTI2Q6NXR4 508 aa13.33□□□□□ -0.28
RFC4-206ENST00000427785 EPM2AIP1Q7L775 607 aaPredicted RBP13.33□□□□□ -0.28
RFC4-206ENST00000427785 KSR1Q8IVT5 923 aa13.33□□□□□ -0.28
RFC4-206ENST00000427785 ASAP3Q8TDY4 903 aa13.33□□□□□ -0.28
RFC4-206ENST00000427785 PPP1R13LQ8WUF5 828 aa13.33□□□□□ -0.28
RFC4-206ENST00000427785 TMEM143Q96AN5 459 aa13.33□□□□□ -0.28
RFC4-206ENST00000427785 ZBTB10Q96DT7 871 aa13.33□□□□□ -0.28
RFC4-206ENST00000427785 KIFC3Q9BVG8 833 aa13.33□□□□□ -0.28
RFC4-206ENST00000427785 SEMA6BQ9H3T3 888 aa13.33□□□□□ -0.28
RFC4-206ENST00000427785 RNPEPQ9H4A4 650 aa13.33□□□□□ -0.28
RFC4-206ENST00000427785 DHX33Q9H6R0 707 aaKnown RBP13.33□□□□□ -0.28
RFC4-206ENST00000427785 PDLIM7Q9NR12 457 aa13.33□□□□□ -0.28
RFC4-206ENST00000427785 SAMSN1Q9NSI8 373 aaKnown RBP13.33□□□□□ -0.28
RFC4-206ENST00000427785 TRIM17Q9Y577 477 aa13.33□□□□□ -0.28
RFC4-206ENST00000427785 PTCH2Q9Y6C5 1203 aa13.33□□□□□ -0.28
RFC4-206ENST00000427785 BICDL2A1A5D9 508 aa13.32□□□□□ -0.28
RFC4-206ENST00000427785 A6NJR5 290 aa13.32□□□□□ -0.28
RFC4-206ENST00000427785 SEPT4O43236 478 aa13.32□□□□□ -0.28
RFC4-206ENST00000427785 HBP1O60381 514 aa13.32□□□□□ -0.28
RFC4-206ENST00000427785 DUSP11O75319 330 aaKnown RBP13.32□□□□□ -0.28
RFC4-206ENST00000427785 GNRH1P01148 92 aa13.32□□□□□ -0.28
RFC4-206ENST00000427785 C6orf222P0C671 652 aaPredicted RBP13.32□□□□□ -0.28
RFC4-206ENST00000427785 CPT1AP50416 773 aa13.32□□□□□ -0.28
RFC4-206ENST00000427785 PEX3P56589 373 aa13.32□□□□□ -0.28
RFC4-206ENST00000427785 DMP1Q13316 513 aaPredicted RBP13.32□□□□□ -0.28
RFC4-206ENST00000427785 FSCN1Q16658 493 aaKnown RBP13.32□□□□□ -0.28
RFC4-206ENST00000427785 LRRC71Q8N4P6 559 aa13.32□□□□□ -0.28
RFC4-206ENST00000427785 SLC7A3Q8WY07 619 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms