RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 GPR182O15218 404 aa17.02■□□□□ 0.32
ATG4B-209ENST00000425239 FGF18O76093 207 aa17.02■□□□□ 0.32
ATG4B-209ENST00000425239 CPA1P15085 419 aa17.02■□□□□ 0.32
ATG4B-209ENST00000425239 CIITAP33076 1130 aa17.02■□□□□ 0.32
ATG4B-209ENST00000425239 ZNF76P36508 570 aa17.02■□□□□ 0.32
ATG4B-209ENST00000425239 NTRK3Q16288 839 aa17.02■□□□□ 0.32
ATG4B-209ENST00000425239 KIZQ2M2Z5 673 aa17.02■□□□□ 0.32
ATG4B-209ENST00000425239 ZNF746Q6NUN9 644 aaPredicted RBP17.02■□□□□ 0.32
ATG4B-209ENST00000425239 MIS18BP1Q6P0N0 1132 aa17.02■□□□□ 0.32
ATG4B-209ENST00000425239 TMEM184AQ6ZMB5 413 aa17.02■□□□□ 0.32
ATG4B-209ENST00000425239 FBXL16Q8N461 479 aa17.02■□□□□ 0.32
ATG4B-209ENST00000425239 BBXQ8WY36 941 aaPredicted RBP17.02■□□□□ 0.32
ATG4B-209ENST00000425239 SUSD6Q92537 303 aa17.02■□□□□ 0.32
ATG4B-209ENST00000425239 ADAMTS10Q9H324 1103 aa17.02■□□□□ 0.32
ATG4B-209ENST00000425239 ELAC1Q9H777 363 aaKnown RBP17.02■□□□□ 0.32
ATG4B-209ENST00000425239 TBC1D22BQ9NU19 505 aa17.02■□□□□ 0.32
ATG4B-209ENST00000425239 TMEM161AQ9NX61 479 aa17.02■□□□□ 0.32
ATG4B-209ENST00000425239 LRFN2Q9ULH4 789 aa17.02■□□□□ 0.32
ATG4B-209ENST00000425239 GINS2Q9Y248 185 aa17.02■□□□□ 0.32
ATG4B-209ENST00000425239 TBKBP1A7MCY6 615 aa17.01■□□□□ 0.31
ATG4B-209ENST00000425239 VTNP04004 478 aa17.01■□□□□ 0.31
ATG4B-209ENST00000425239 FGFR1P11362 822 aa17.01■□□□□ 0.31
ATG4B-209ENST00000425239 COLGALT1Q8NBJ5 622 aa17.01■□□□□ 0.31
ATG4B-209ENST00000425239 PPP2R3CQ969Q6 453 aa17.01■□□□□ 0.31
ATG4B-209ENST00000425239 CASD1Q96PB1 797 aa17.01■□□□□ 0.31
ATG4B-209ENST00000425239 OSMRQ99650 979 aa17.01■□□□□ 0.31
ATG4B-209ENST00000425239 ZNF577Q9BSK1 485 aa17.01■□□□□ 0.31
ATG4B-209ENST00000425239 AGXT2Q9BYV1 514 aa17.01■□□□□ 0.31
ATG4B-209ENST00000425239 S1PR5Q9H228 398 aa17.01■□□□□ 0.31
ATG4B-209ENST00000425239 TLE6Q9H808 572 aa17.01■□□□□ 0.31
ATG4B-209ENST00000425239 USP15Q9Y4E8 981 aaPredicted RBP17.01■□□□□ 0.31
ATG4B-209ENST00000425239 PCDHB12Q9Y5F1 795 aa17.01■□□□□ 0.31
ATG4B-209ENST00000425239 NID2Q14112 1375 aa17.01■□□□□ 0.31
ATG4B-209ENST00000425239 PRPF3O43395 683 aaKnown RBP17■□□□□ 0.31
ATG4B-209ENST00000425239 ZNF862O60290 1169 aa17■□□□□ 0.31
ATG4B-209ENST00000425239 PLCB3Q01970 1234 aa17■□□□□ 0.31
ATG4B-209ENST00000425239 DUSP6Q16828 381 aa17■□□□□ 0.31
ATG4B-209ENST00000425239 SMAP1Q8IYB5 467 aaPredicted RBP17■□□□□ 0.31
ATG4B-209ENST00000425239 TLR9Q9NR96 1032 aa17■□□□□ 0.31
ATG4B-209ENST00000425239 PCDHA10Q9Y5I2 948 aa17■□□□□ 0.31
ATG4B-209ENST00000425239 DENND3A2RUS2 1198 aa16.99■□□□□ 0.31
ATG4B-209ENST00000425239 APOBRQ0VD83 1088 aa16.99■□□□□ 0.31
ATG4B-209ENST00000425239 TRIM67Q6ZTA4 783 aa16.99■□□□□ 0.31
ATG4B-209ENST00000425239 RASGRP4Q8TDF6 673 aa16.99■□□□□ 0.31
ATG4B-209ENST00000425239 PPP1R16BQ96T49 567 aa16.99■□□□□ 0.31
ATG4B-209ENST00000425239 GABBR1Q9UBS5 961 aa16.99■□□□□ 0.31
ATG4B-209ENST00000425239 LZTS1Q9Y250 596 aa16.99■□□□□ 0.31
ATG4B-209ENST00000425239 HMGB1P09429 215 aaKnown RBP16.98■□□□□ 0.31
ATG4B-209ENST00000425239 ATF7P17544 494 aaPredicted RBP16.98■□□□□ 0.31
ATG4B-209ENST00000425239 MRE11P49959 708 aa16.98■□□□□ 0.31
ATG4B-209ENST00000425239 ZXDAP98168 799 aa16.98■□□□□ 0.31
ATG4B-209ENST00000425239 SETQ01105 290 aaPredicted RBP16.98■□□□□ 0.31
ATG4B-209ENST00000425239 KRT32Q14532 448 aa16.98■□□□□ 0.31
ATG4B-209ENST00000425239 ODR4Q5SWX8 454 aa16.98■□□□□ 0.31
ATG4B-209ENST00000425239 IER5LQ5T953 404 aa16.98■□□□□ 0.31
ATG4B-209ENST00000425239 MCTP2Q6DN12 878 aa16.98■□□□□ 0.31
ATG4B-209ENST00000425239 PDE12Q6L8Q7 609 aaKnown RBP16.98■□□□□ 0.31
ATG4B-209ENST00000425239 SYCE2Q6PIF2 218 aa16.98■□□□□ 0.31
ATG4B-209ENST00000425239 Q6ZUG5 572 aa16.98■□□□□ 0.31
ATG4B-209ENST00000425239 MFSD14AQ96MC6 490 aa16.98■□□□□ 0.31
ATG4B-209ENST00000425239 CEP89Q96ST8 783 aa16.98■□□□□ 0.31
ATG4B-209ENST00000425239 PHF7Q9BWX1 381 aaPredicted RBP16.98■□□□□ 0.31
ATG4B-209ENST00000425239 ATP6V0A4Q9HBG4 840 aa16.98■□□□□ 0.31
ATG4B-209ENST00000425239 C6orf50Q9HD87 102 aa16.98■□□□□ 0.31
ATG4B-209ENST00000425239 AAASQ9NRG9 546 aa16.98■□□□□ 0.31
ATG4B-209ENST00000425239 RNF216Q9NWF9 866 aaPredicted RBP16.98■□□□□ 0.31
ATG4B-209ENST00000425239 HIDE1A8MVS5 230 aa16.97■□□□□ 0.31
ATG4B-209ENST00000425239 MAGEB2O15479 319 aa16.97■□□□□ 0.31
ATG4B-209ENST00000425239 STBD1O95210 358 aa16.97■□□□□ 0.31
ATG4B-209ENST00000425239 PSAPP07602 524 aa16.97■□□□□ 0.31
ATG4B-209ENST00000425239 IBSPP21815 317 aaPredicted RBP16.97■□□□□ 0.31
ATG4B-209ENST00000425239 EIF4BP23588 611 aaKnown RBP16.97■□□□□ 0.31
ATG4B-209ENST00000425239 METAP2P50579 478 aaKnown RBP eCLIP16.97■□□□□ 0.31
ATG4B-209ENST00000425239 CLCN3P51790 818 aa16.97■□□□□ 0.31
ATG4B-209ENST00000425239 EVCP57679 992 aa16.97■□□□□ 0.31
ATG4B-209ENST00000425239 NLRP11P59045 1033 aaKnown RBP16.97■□□□□ 0.31
ATG4B-209ENST00000425239 TARBP2Q15633 366 aaKnown RBP16.97■□□□□ 0.31
ATG4B-209ENST00000425239 PRR16Q569H4 304 aa16.97■□□□□ 0.31
ATG4B-209ENST00000425239 EFCAB12Q6NXP0 572 aa16.97■□□□□ 0.31
ATG4B-209ENST00000425239 TRMT1LQ7Z2T5 733 aaKnown RBP16.97■□□□□ 0.31
ATG4B-209ENST00000425239 ZNF598Q86UK7 904 aaKnown RBP16.97■□□□□ 0.31
ATG4B-209ENST00000425239 REXO1Q8N1G1 1221 aaKnown RBP16.97■□□□□ 0.31
ATG4B-209ENST00000425239 METTL13Q8N6R0 699 aa16.97■□□□□ 0.31
ATG4B-209ENST00000425239 MICAL1Q8TDZ2 1067 aa16.97■□□□□ 0.31
ATG4B-209ENST00000425239 MRPS27Q92552 414 aaKnown RBP16.97■□□□□ 0.31
ATG4B-209ENST00000425239 PHKBQ93100 1093 aa16.97■□□□□ 0.31
ATG4B-209ENST00000425239 CDCA3Q99618 268 aaPredicted RBP16.97■□□□□ 0.31
ATG4B-209ENST00000425239 TMEM117Q9H0C3 514 aa16.97■□□□□ 0.31
ATG4B-209ENST00000425239 SNX14Q9Y5W7 946 aa16.97■□□□□ 0.31
ATG4B-209ENST00000425239 CFAP54Q96N23 3096 aa16.96■□□□□ 0.31
ATG4B-209ENST00000425239 CCDC196A0A1B0GTZ2 297 aa16.96■□□□□ 0.31
ATG4B-209ENST00000425239 MSH4O15457 936 aa16.96■□□□□ 0.31
ATG4B-209ENST00000425239 UGCGQ16739 394 aa16.96■□□□□ 0.31
ATG4B-209ENST00000425239 CLLU1OSQ5K130 101 aa16.96■□□□□ 0.31
ATG4B-209ENST00000425239 KCNT2Q6UVM3 1135 aa16.96■□□□□ 0.31
ATG4B-209ENST00000425239 B3GNT9Q6UX72 402 aa16.96■□□□□ 0.31
ATG4B-209ENST00000425239 ECHDC2Q86YB7 292 aa16.96■□□□□ 0.31
ATG4B-209ENST00000425239 CKAP2LQ8IYA6 745 aa16.96■□□□□ 0.31
ATG4B-209ENST00000425239 THNSL1Q8IYQ7 743 aa16.96■□□□□ 0.31
ATG4B-209ENST00000425239 LRRC71Q8N4P6 559 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms