RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 MAP7D2Q96T17 732 aa18.28■□□□□ 0.52
COL18A1-205ENST00000423214 SLC26A6Q9BXS9 759 aa18.28■□□□□ 0.52
COL18A1-205ENST00000423214 RNF26Q9BY78 433 aaPredicted RBP18.28■□□□□ 0.52
COL18A1-205ENST00000423214 CDHR5Q9HBB8 845 aa18.28■□□□□ 0.52
COL18A1-205ENST00000423214 RGS18Q9NS28 235 aa18.28■□□□□ 0.52
COL18A1-205ENST00000423214 GABBR1Q9UBS5 961 aa18.28■□□□□ 0.52
COL18A1-205ENST00000423214 ST3GAL5Q9UNP4 418 aa18.28■□□□□ 0.52
COL18A1-205ENST00000423214 AKT3Q9Y243 479 aa18.28■□□□□ 0.52
COL18A1-205ENST00000423214 MAFBQ9Y5Q3 323 aaPredicted RBP18.28■□□□□ 0.52
COL18A1-205ENST00000423214 ATP4AP20648 1035 aa18.27■□□□□ 0.52
COL18A1-205ENST00000423214 PSMA5P28066 241 aa18.27■□□□□ 0.52
COL18A1-205ENST00000423214 IRS1P35568 1242 aa18.27■□□□□ 0.52
COL18A1-205ENST00000423214 NRIP1P48552 1158 aa18.27■□□□□ 0.52
COL18A1-205ENST00000423214 CLCN3P51790 818 aa18.27■□□□□ 0.52
COL18A1-205ENST00000423214 CAMK1Q14012 370 aa18.27■□□□□ 0.52
COL18A1-205ENST00000423214 FAM228AQ86W67 206 aa18.27■□□□□ 0.52
COL18A1-205ENST00000423214 KCNB2Q92953 911 aa18.27■□□□□ 0.52
COL18A1-205ENST00000423214 ARID2Q68CP9 1835 aa18.26■□□□□ 0.51
COL18A1-205ENST00000423214 C9IYK1 514 aa18.26■□□□□ 0.51
COL18A1-205ENST00000423214 ADAMTS3O15072 1205 aa18.26■□□□□ 0.51
COL18A1-205ENST00000423214 MAGEB2O15479 319 aa18.26■□□□□ 0.51
COL18A1-205ENST00000423214 PPFIA3O75145 1194 aa18.26■□□□□ 0.51
COL18A1-205ENST00000423214 REC8O95072 547 aa18.26■□□□□ 0.51
COL18A1-205ENST00000423214 TMOD1P28289 359 aa18.26■□□□□ 0.51
COL18A1-205ENST00000423214 UBE3AQ05086 875 aa18.26■□□□□ 0.51
COL18A1-205ENST00000423214 ADAM15Q13444 863 aa18.26■□□□□ 0.51
COL18A1-205ENST00000423214 ADGRD2Q7Z7M1 963 aa18.26■□□□□ 0.51
COL18A1-205ENST00000423214 RBM23Q86U06 439 aaKnown RBP18.26■□□□□ 0.51
COL18A1-205ENST00000423214 THNSL1Q8IYQ7 743 aa18.26■□□□□ 0.51
COL18A1-205ENST00000423214 EFHBQ8N7U6 833 aa18.26■□□□□ 0.51
COL18A1-205ENST00000423214 SCLT1Q96NL6 688 aa18.26■□□□□ 0.51
COL18A1-205ENST00000423214 ATP6V0A4Q9HBG4 840 aa18.26■□□□□ 0.51
COL18A1-205ENST00000423214 TLR9Q9NR96 1032 aa18.26■□□□□ 0.51
COL18A1-205ENST00000423214 VPS54Q9P1Q0 977 aa18.26■□□□□ 0.51
COL18A1-205ENST00000423214 ZNF318Q5VUA4 2279 aa18.25■□□□□ 0.51
COL18A1-205ENST00000423214 FSD2A1L4K1 749 aa18.25■□□□□ 0.51
COL18A1-205ENST00000423214 C19orf67A6NJJ6 358 aa18.25■□□□□ 0.51
COL18A1-205ENST00000423214 CHMP2AO43633 222 aa18.25■□□□□ 0.51
COL18A1-205ENST00000423214 GAS7O60861 476 aa18.25■□□□□ 0.51
COL18A1-205ENST00000423214 OATP04181 439 aa18.25■□□□□ 0.51
COL18A1-205ENST00000423214 IFNAR1P17181 557 aa18.25■□□□□ 0.51
COL18A1-205ENST00000423214 CIITAP33076 1130 aa18.25■□□□□ 0.51
COL18A1-205ENST00000423214 PRKCEQ02156 737 aa18.25■□□□□ 0.51
COL18A1-205ENST00000423214 TRIM22Q8IYM9 498 aa18.25■□□□□ 0.51
COL18A1-205ENST00000423214 COLGALT1Q8NBJ5 622 aa18.25■□□□□ 0.51
COL18A1-205ENST00000423214 MICAL1Q8TDZ2 1067 aa18.25■□□□□ 0.51
COL18A1-205ENST00000423214 TEKT3Q9BXF9 490 aa18.25■□□□□ 0.51
COL18A1-205ENST00000423214 TMEM161AQ9NX61 479 aa18.25■□□□□ 0.51
COL18A1-205ENST00000423214 GPR32O75388 356 aa18.24■□□□□ 0.51
COL18A1-205ENST00000423214 FGFR1P11362 822 aa18.24■□□□□ 0.51
COL18A1-205ENST00000423214 LAG3P18627 525 aa18.24■□□□□ 0.51
COL18A1-205ENST00000423214 JAK3P52333 1124 aa18.24■□□□□ 0.51
COL18A1-205ENST00000423214 NLRP5P59047 1200 aa18.24■□□□□ 0.51
COL18A1-205ENST00000423214 CCT2P78371 535 aaKnown RBP18.24■□□□□ 0.51
COL18A1-205ENST00000423214 FAM102BQ5T8I3 360 aa18.24■□□□□ 0.51
COL18A1-205ENST00000423214 EFCAB12Q6NXP0 572 aa18.24■□□□□ 0.51
COL18A1-205ENST00000423214 ABI1Q8IZP0 508 aa18.24■□□□□ 0.51
COL18A1-205ENST00000423214 FBXL16Q8N461 479 aa18.24■□□□□ 0.51
COL18A1-205ENST00000423214 LRRC71Q8N4P6 559 aa18.24■□□□□ 0.51
COL18A1-205ENST00000423214 LENG9Q96B70 501 aa18.24■□□□□ 0.51
COL18A1-205ENST00000423214 AGXT2Q9BYV1 514 aa18.24■□□□□ 0.51
COL18A1-205ENST00000423214 NCOA5Q9HCD5 579 aaKnown RBP18.24■□□□□ 0.51
COL18A1-205ENST00000423214 DISC1Q9NRI5 854 aa18.24■□□□□ 0.51
COL18A1-205ENST00000423214 HOXA2O43364 376 aa18.23■□□□□ 0.51
COL18A1-205ENST00000423214 FGF18O76093 207 aa18.23■□□□□ 0.51
COL18A1-205ENST00000423214 ZSCAN20P17040 1043 aaPredicted RBP18.23■□□□□ 0.51
COL18A1-205ENST00000423214 SFNP31947 248 aa18.23■□□□□ 0.51
COL18A1-205ENST00000423214 NLRP11P59045 1033 aaKnown RBP18.23■□□□□ 0.51
COL18A1-205ENST00000423214 NTRK3Q16288 839 aa18.23■□□□□ 0.51
COL18A1-205ENST00000423214 LRCH2Q5VUJ6 765 aa18.23■□□□□ 0.51
COL18A1-205ENST00000423214 ZNF710Q8N1W2 664 aa18.23■□□□□ 0.51
COL18A1-205ENST00000423214 SMRP1Q8NCR6 262 aa18.23■□□□□ 0.51
COL18A1-205ENST00000423214 MSLNLQ96KJ4 702 aa18.23■□□□□ 0.51
COL18A1-205ENST00000423214 RIT2Q99578 217 aa18.23■□□□□ 0.51
COL18A1-205ENST00000423214 C22orf23Q9BZE7 217 aa18.23■□□□□ 0.51
COL18A1-205ENST00000423214 ELAC1Q9H777 363 aaKnown RBP18.23■□□□□ 0.51
COL18A1-205ENST00000423214 TLE6Q9H808 572 aa18.23■□□□□ 0.51
COL18A1-205ENST00000423214 SH3GLB2Q9NR46 395 aa18.23■□□□□ 0.51
COL18A1-205ENST00000423214 NRBP2Q9NSY0 501 aa18.23■□□□□ 0.51
COL18A1-205ENST00000423214 HCSTQ9UBK5 93 aa18.23■□□□□ 0.51
COL18A1-205ENST00000423214 BARX2Q9UMQ3 279 aaPredicted RBP18.23■□□□□ 0.51
COL18A1-205ENST00000423214 PCDHGC5Q9Y5F6 944 aa18.23■□□□□ 0.51
COL18A1-205ENST00000423214 MSH4O15457 936 aa18.22■□□□□ 0.51
COL18A1-205ENST00000423214 GLP2RO95838 553 aa18.22■□□□□ 0.51
COL18A1-205ENST00000423214 SRGAP2BP0DMP2 458 aa18.22■□□□□ 0.51
COL18A1-205ENST00000423214 PDIA3P30101 505 aaKnown RBP18.22■□□□□ 0.51
COL18A1-205ENST00000423214 TBC1D8BQ0IIM8 1120 aa18.22■□□□□ 0.51
COL18A1-205ENST00000423214 LRRC43Q8N309 656 aa18.22■□□□□ 0.51
COL18A1-205ENST00000423214 TMEM117Q9H0C3 514 aa18.22■□□□□ 0.51
COL18A1-205ENST00000423214 TYW1Q9NV66 732 aaKnown RBP18.22■□□□□ 0.51
COL18A1-205ENST00000423214 MUTYHQ9UIF7 546 aa18.22■□□□□ 0.51
COL18A1-205ENST00000423214 TECTAO75443 2155 aa18.22■□□□□ 0.51
COL18A1-205ENST00000423214 TRIOO75962 3097 aa18.21■□□□□ 0.51
COL18A1-205ENST00000423214 CPLX1O14810 134 aa18.21■□□□□ 0.51
COL18A1-205ENST00000423214 ZNF862O60290 1169 aa18.21■□□□□ 0.51
COL18A1-205ENST00000423214 EYA4O95677 639 aa18.21■□□□□ 0.51
COL18A1-205ENST00000423214 HOXD11P31277 338 aaPredicted RBP18.21■□□□□ 0.51
COL18A1-205ENST00000423214 USP11P51784 963 aa18.21■□□□□ 0.51
COL18A1-205ENST00000423214 SSRP1Q08945 709 aaKnown RBP18.21■□□□□ 0.51
COL18A1-205ENST00000423214 COASYQ13057 564 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms