RNA–Protein interactions for RNA: ENST00000422760.1

LSM8-203, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 1,920 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-203ENST00000422760 ELP3Q9H9T3 547 aa25.31■■□□□ 1.64
LSM8-203ENST00000422760 MED4Q9NPJ6 270 aa25.31■■□□□ 1.64
LSM8-203ENST00000422760 SAMM50Q9Y512 469 aa25.31■■□□□ 1.64
LSM8-203ENST00000422760 ATP9AO75110 1047 aa25.31■■□□□ 1.64
LSM8-203ENST00000422760 NR3C2P08235 984 aa25.31■■□□□ 1.64
LSM8-203ENST00000422760 HOXD13P35453 343 aa25.31■■□□□ 1.64
LSM8-203ENST00000422760 KNOP1Q1ED39 458 aaKnown RBP25.31■■□□□ 1.64
LSM8-203ENST00000422760 BMT2Q1RMZ1 405 aa25.31■■□□□ 1.64
LSM8-203ENST00000422760 CCDC40Q4G0X9 1142 aa25.31■■□□□ 1.64
LSM8-203ENST00000422760 USP50Q70EL3 339 aaPredicted RBP25.31■■□□□ 1.64
LSM8-203ENST00000422760 ZNF572Q7Z3I7 529 aaPredicted RBP25.31■■□□□ 1.64
LSM8-203ENST00000422760 VSIG10LQ86VR7 867 aa25.31■■□□□ 1.64
LSM8-203ENST00000422760 CDCA5Q96FF9 252 aa25.31■■□□□ 1.64
LSM8-203ENST00000422760 LUC7LQ9NQ29 371 aaKnown RBP25.31■■□□□ 1.64
LSM8-203ENST00000422760 SFI1A8K8P3 1242 aa25.3■■□□□ 1.64
LSM8-203ENST00000422760 PRPF6O94906 941 aaKnown RBP25.3■■□□□ 1.64
LSM8-203ENST00000422760 GCNT3O95395 438 aa25.3■■□□□ 1.64
LSM8-203ENST00000422760 MARSP56192 900 aaKnown RBP25.3■■□□□ 1.64
LSM8-203ENST00000422760 NSUN6Q8TEA1 469 aaKnown RBP25.3■■□□□ 1.64
LSM8-203ENST00000422760 PARVGQ9HBI0 331 aa25.3■■□□□ 1.64
LSM8-203ENST00000422760 ABCB6Q9NP58 842 aa25.3■■□□□ 1.64
LSM8-203ENST00000422760 ARHGEF35A5YM69 484 aa25.29■■□□□ 1.64
LSM8-203ENST00000422760 EPHX2P34913 555 aa25.29■■□□□ 1.64
LSM8-203ENST00000422760 MAPK8IP2Q13387 824 aaPredicted RBP25.29■■□□□ 1.64
LSM8-203ENST00000422760 OTUD5Q96G74 571 aa25.29■■□□□ 1.64
LSM8-203ENST00000422760 CLMNQ96JQ2 1002 aa25.29■■□□□ 1.64
LSM8-203ENST00000422760 ALS2CR12Q96Q35 445 aa25.29■■□□□ 1.64
LSM8-203ENST00000422760 ODF2LQ9ULJ1 636 aa25.29■■□□□ 1.64
LSM8-203ENST00000422760 TRAF3IP3Q9Y228 551 aa25.29■■□□□ 1.64
LSM8-203ENST00000422760 IRF6O14896 467 aa25.29■■□□□ 1.64
LSM8-203ENST00000422760 PJA2O43164 708 aa25.29■■□□□ 1.64
LSM8-203ENST00000422760 ATP1A1P05023 1023 aaKnown RBP25.29■■□□□ 1.64
LSM8-203ENST00000422760 RHOXF2BP0C7M4 288 aa25.29■■□□□ 1.64
LSM8-203ENST00000422760 ZNF131P52739 623 aa25.29■■□□□ 1.64
LSM8-203ENST00000422760 VSNL1P62760 191 aa25.29■■□□□ 1.64
LSM8-203ENST00000422760 MYCT1Q8N699 235 aa25.29■■□□□ 1.64
LSM8-203ENST00000422760 NEK11Q8NG66 645 aa25.29■■□□□ 1.64
LSM8-203ENST00000422760 GPRASP2Q96D09 838 aa25.29■■□□□ 1.64
LSM8-203ENST00000422760 INPP4AQ96PE3 977 aaPredicted RBP25.29■■□□□ 1.64
LSM8-203ENST00000422760 RHOXF2Q9BQY4 288 aa25.29■■□□□ 1.64
LSM8-203ENST00000422760 TRIM10Q9UDY6 481 aa25.29■■□□□ 1.64
LSM8-203ENST00000422760 FAM184BQ9ULE4 1060 aa25.29■■□□□ 1.64
LSM8-203ENST00000422760 WDR81Q562E7 1941 aa25.29■■□□□ 1.64
LSM8-203ENST00000422760 CCNE2O96020 404 aa25.28■■□□□ 1.64
LSM8-203ENST00000422760 NR2F2P24468 414 aa25.28■■□□□ 1.64
LSM8-203ENST00000422760 GUCY2CP25092 1073 aa25.28■■□□□ 1.64
LSM8-203ENST00000422760 NF2P35240 595 aa25.28■■□□□ 1.64
LSM8-203ENST00000422760 QARSP47897 775 aaKnown RBP25.28■■□□□ 1.64
LSM8-203ENST00000422760 MOB2Q70IA6 237 aa25.28■■□□□ 1.64
LSM8-203ENST00000422760 IFIH1Q9BYX4 1025 aaKnown RBP25.28■■□□□ 1.64
LSM8-203ENST00000422760 TSKSQ9UJT2 592 aa25.28■■□□□ 1.64
LSM8-203ENST00000422760 DOCK5Q9H7D0 1870 aa25.28■■□□□ 1.64
LSM8-203ENST00000422760 PDXKO00764 312 aa25.27■■□□□ 1.64
LSM8-203ENST00000422760 POLR3GO15318 223 aaPredicted RBP25.27■■□□□ 1.64
LSM8-203ENST00000422760 KRT76Q01546 638 aa25.27■■□□□ 1.64
LSM8-203ENST00000422760 PPATQ06203 517 aa25.27■■□□□ 1.64
LSM8-203ENST00000422760 ADAM9Q13443 819 aa25.27■■□□□ 1.64
LSM8-203ENST00000422760 HSP90B2PQ58FF3 399 aa25.27■■□□□ 1.64
LSM8-203ENST00000422760 LBX2Q6XYB7 198 aa25.27■■□□□ 1.64
LSM8-203ENST00000422760 GADL1Q6ZQY3 521 aa25.27■■□□□ 1.64
LSM8-203ENST00000422760 ANKRD13AQ8IZ07 590 aa25.27■■□□□ 1.64
LSM8-203ENST00000422760 RNF10Q8N5U6 811 aaKnown RBP25.27■■□□□ 1.64
LSM8-203ENST00000422760 NOA1Q8NC60 698 aaKnown RBP25.27■■□□□ 1.64
LSM8-203ENST00000422760 FAM71BQ8TC56 605 aa25.27■■□□□ 1.64
LSM8-203ENST00000422760 ZC3H15Q8WU90 426 aaKnown RBP25.27■■□□□ 1.64
LSM8-203ENST00000422760 DEF6Q9H4E7 631 aa25.27■■□□□ 1.64
LSM8-203ENST00000422760 SEL1LQ9UBV2 794 aa25.27■■□□□ 1.64
LSM8-203ENST00000422760 ASTN1O14525 1302 aa25.27■■□□□ 1.64
LSM8-203ENST00000422760 A0A0G2JLL6 359 aaPredicted RBP25.27■■□□□ 1.64
LSM8-203ENST00000422760 WDR64B1ANS9 1081 aa25.27■■□□□ 1.64
LSM8-203ENST00000422760 TCP1P17987 556 aaKnown RBP25.27■■□□□ 1.64
LSM8-203ENST00000422760 JAK3P52333 1124 aa25.27■■□□□ 1.64
LSM8-203ENST00000422760 CASP8Q14790 479 aa25.27■■□□□ 1.64
LSM8-203ENST00000422760 PRRT2Q7Z6L0 340 aaPredicted RBP25.27■■□□□ 1.64
LSM8-203ENST00000422760 NLRX1Q86UT6 975 aa25.27■■□□□ 1.64
LSM8-203ENST00000422760 TRIM59Q8IWR1 403 aa25.27■■□□□ 1.64
LSM8-203ENST00000422760 LACRTQ9GZZ8 138 aa25.27■■□□□ 1.64
LSM8-203ENST00000422760 MAF1Q9H063 256 aa25.27■■□□□ 1.64
LSM8-203ENST00000422760 TYW1Q9NV66 732 aaKnown RBP25.27■■□□□ 1.64
LSM8-203ENST00000422760 PCDHA13Q9Y5I0 950 aa25.27■■□□□ 1.64
LSM8-203ENST00000422760 CETN3O15182 167 aa25.26■■□□□ 1.63
LSM8-203ENST00000422760 EIF3DO15371 548 aaKnown RBP eCLIP25.26■■□□□ 1.63
LSM8-203ENST00000422760 LYPLA2O95372 231 aa25.26■■□□□ 1.63
LSM8-203ENST00000422760 NMT1P30419 496 aaKnown RBP25.26■■□□□ 1.63
LSM8-203ENST00000422760 KIF11P52732 1056 aa25.26■■□□□ 1.63
LSM8-203ENST00000422760 KCNA1Q09470 495 aa25.26■■□□□ 1.63
LSM8-203ENST00000422760 UGCGQ16739 394 aa25.26■■□□□ 1.63
LSM8-203ENST00000422760 PADI6Q6TGC4 694 aa25.26■■□□□ 1.63
LSM8-203ENST00000422760 ERO1BQ86YB8 467 aa25.26■■□□□ 1.63
LSM8-203ENST00000422760 PROCA1Q8NCQ7 364 aaPredicted RBP25.26■■□□□ 1.63
LSM8-203ENST00000422760 FIZ1Q96SL8 496 aa25.26■■□□□ 1.63
LSM8-203ENST00000422760 CEP72Q9P209 647 aa25.26■■□□□ 1.63
LSM8-203ENST00000422760 TCEAL9Q9UHQ7 104 aa25.26■■□□□ 1.63
LSM8-203ENST00000422760 DBR1Q9UK59 544 aaKnown RBP25.26■■□□□ 1.63
LSM8-203ENST00000422760 SCN4AP35499 1836 aa25.26■■□□□ 1.63
LSM8-203ENST00000422760 CALUO43852 315 aaPredicted RBP25.25■■□□□ 1.63
LSM8-203ENST00000422760 PEX10O60683 326 aa25.25■■□□□ 1.63
LSM8-203ENST00000422760 RGS20O76081 388 aa25.25■■□□□ 1.63
LSM8-203ENST00000422760 SFNP31947 248 aa25.25■■□□□ 1.63
LSM8-203ENST00000422760 PDXDC1Q6P996 788 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms