RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 POLR2BP30876 1174 aaKnown RBP10.58□□□□□ -0.72
CMSS1-201ENST00000421999 YWHABP31946 246 aaKnown RBP10.58□□□□□ -0.72
CMSS1-201ENST00000421999 FXR2P51116 673 aaKnown RBP eCLIP10.58□□□□□ -0.72
CMSS1-201ENST00000421999 HS1BP3Q53T59 392 aa10.58□□□□□ -0.72
CMSS1-201ENST00000421999 CHADLQ6NUI6 762 aa10.58□□□□□ -0.72
CMSS1-201ENST00000421999 RIT2Q99578 217 aa10.58□□□□□ -0.72
CMSS1-201ENST00000421999 IFIH1Q9BYX4 1025 aaKnown RBP10.58□□□□□ -0.72
CMSS1-201ENST00000421999 POLR3FQ9H1D9 316 aaPredicted RBP10.58□□□□□ -0.72
CMSS1-201ENST00000421999 SMARCAD1Q9H4L7 1026 aa10.58□□□□□ -0.72
CMSS1-201ENST00000421999 SLC38A10Q9HBR0 1119 aa10.58□□□□□ -0.72
CMSS1-201ENST00000421999 USP2O75604 605 aaPredicted RBP10.58□□□□□ -0.72
CMSS1-201ENST00000421999 EYA4O95677 639 aa10.58□□□□□ -0.72
CMSS1-201ENST00000421999 PTGER2P43116 358 aa10.58□□□□□ -0.72
CMSS1-201ENST00000421999 PPP2R3AQ06190 1150 aa10.58□□□□□ -0.72
CMSS1-201ENST00000421999 GOLGA8FQ08AF8 430 aa10.58□□□□□ -0.72
CMSS1-201ENST00000421999 GOLGA8DPQ0D2H9 430 aa10.58□□□□□ -0.72
CMSS1-201ENST00000421999 PTPROQ16827 1216 aa10.58□□□□□ -0.72
CMSS1-201ENST00000421999 CATSPER3Q86XQ3 398 aa10.58□□□□□ -0.72
CMSS1-201ENST00000421999 TSGA10Q9BZW7 698 aa10.58□□□□□ -0.72
CMSS1-201ENST00000421999 FAM204AQ9H8W3 233 aa10.58□□□□□ -0.72
CMSS1-201ENST00000421999 ARHGEF37A1IGU5 675 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 MYMKA6NI61 221 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 E7EVH7 732 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 ACTN4O43707 911 aaKnown RBP10.57□□□□□ -0.72
CMSS1-201ENST00000421999 AFPP02771 609 aaKnown RBP10.57□□□□□ -0.72
CMSS1-201ENST00000421999 EEF1GP26641 437 aaKnown RBP10.57□□□□□ -0.72
CMSS1-201ENST00000421999 NSFP46459 744 aaKnown RBP10.57□□□□□ -0.72
CMSS1-201ENST00000421999 TNFAIP2Q03169 654 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 XKR3Q5GH77 459 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 RNF180Q86T96 592 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 TSNARE1Q96NA8 513 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 NMRK2Q9NPI5 230 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 SYNPO2Q9UMS6 1093 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 PDE4DIPQ5VU43 2346 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 UPP2O95045 317 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 MYZAPP0CAP1 466 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 RPA1P27694 616 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 MFAP3P55082 362 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 MRPS9P82933 396 aaKnown RBP10.57□□□□□ -0.72
CMSS1-201ENST00000421999 CNTN2Q02246 1040 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 ALCAMQ13740 583 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 CATSPERGQ6ZRH7 1159 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 CEP57Q86XR8 500 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 NSMCE1Q8WV22 266 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 RANBP17Q9H2T7 1088 aaKnown RBP10.57□□□□□ -0.72
CMSS1-201ENST00000421999 MROH8Q9H579 483 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 TUFT1Q9NNX1 390 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 FAM184BQ9ULE4 1060 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 TRIM17Q9Y577 477 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 FAM86B1E9PN63 330 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 FAM86B2P0C5J1 330 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 NPEPPSP55786 919 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 RRP1BQ14684 758 aaKnown RBP10.57□□□□□ -0.72
CMSS1-201ENST00000421999 ZNF394Q53GI3 561 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 PLA2G4FQ68DD2 849 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 UBL4BQ8N7F7 174 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 OR6B3Q8NGW1 331 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 MTIF3Q9H2K0 278 aaKnown RBP10.57□□□□□ -0.72
CMSS1-201ENST00000421999 TXNDC16Q9P2K2 825 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 SNHG28P0DPA3 235 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 MAPK4P31152 587 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 ATN1P54259 1190 aaPredicted RBP10.57□□□□□ -0.72
CMSS1-201ENST00000421999 STK4Q13043 487 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 CALCOCO2Q13137 446 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 PEX26Q7Z412 305 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 TMEM143Q96AN5 459 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 PURBQ96QR8 312 aaKnown RBP10.57□□□□□ -0.72
CMSS1-201ENST00000421999 FAM213AQ9BRX8 229 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 KATNAL1Q9BW62 490 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 LRRC4Q9HBW1 653 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 A1CFQ9NQ94 594 aaKnown RBP10.57□□□□□ -0.72
CMSS1-201ENST00000421999 PXMP2Q9NR77 195 aa10.57□□□□□ -0.72
CMSS1-201ENST00000421999 PIN4Q9Y237 131 aaKnown RBP10.57□□□□□ -0.72
CMSS1-201ENST00000421999 UBR2Q8IWV8 1755 aa10.56□□□□□ -0.72
CMSS1-201ENST00000421999 ARHGAP6O43182 974 aa10.56□□□□□ -0.72
CMSS1-201ENST00000421999 LDHAP00338 332 aaKnown RBP10.56□□□□□ -0.72
CMSS1-201ENST00000421999 BPIFB4P59827 614 aa10.56□□□□□ -0.72
CMSS1-201ENST00000421999 BFSP1Q12934 665 aa10.56□□□□□ -0.72
CMSS1-201ENST00000421999 PPP2R5DQ14738 602 aa10.56□□□□□ -0.72
CMSS1-201ENST00000421999 SURF1Q15526 300 aa10.56□□□□□ -0.72
CMSS1-201ENST00000421999 MAN2A1Q16706 1144 aa10.56□□□□□ -0.72
CMSS1-201ENST00000421999 SECISBP2LQ93073 1101 aaKnown RBP10.56□□□□□ -0.72
CMSS1-201ENST00000421999 C2orf40Q9H1Z8 148 aa10.56□□□□□ -0.72
CMSS1-201ENST00000421999 MEIS2O14770 477 aa10.56□□□□□ -0.72
CMSS1-201ENST00000421999 MAFGO15525 162 aa10.56□□□□□ -0.72
CMSS1-201ENST00000421999 THAP12O43422 761 aa10.56□□□□□ -0.72
CMSS1-201ENST00000421999 CEP104O60308 925 aa10.56□□□□□ -0.72
CMSS1-201ENST00000421999 HIP1RO75146 1068 aa10.56□□□□□ -0.72
CMSS1-201ENST00000421999 NMT1P30419 496 aaKnown RBP10.56□□□□□ -0.72
CMSS1-201ENST00000421999 LRRC63Q05C16 580 aa10.56□□□□□ -0.72
CMSS1-201ENST00000421999 DPYDQ12882 1025 aa10.56□□□□□ -0.72
CMSS1-201ENST00000421999 PPIL2Q13356 520 aa10.56□□□□□ -0.72
CMSS1-201ENST00000421999 ZNF365Q70YC5 407 aa10.56□□□□□ -0.72
CMSS1-201ENST00000421999 XXYLT1Q8NBI6 393 aa10.56□□□□□ -0.72
CMSS1-201ENST00000421999 MIS12Q9H081 205 aa10.56□□□□□ -0.72
CMSS1-201ENST00000421999 UNC45AQ9H3U1 944 aa10.56□□□□□ -0.72
CMSS1-201ENST00000421999 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.56□□□□□ -0.72
CMSS1-201ENST00000421999 V9GYY5 206 aaPredicted RBP10.56□□□□□ -0.72
CMSS1-201ENST00000421999 TAF1P21675 1872 aa10.56□□□□□ -0.72
CMSS1-201ENST00000421999 MED24O75448 989 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms