RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 KIZQ2M2Z5 673 aa21.12■□□□□ 0.97
AC004540.1-203ENST00000421862 BRF1Q92994 677 aa21.12■□□□□ 0.97
AC004540.1-203ENST00000421862 ELAC1Q9H777 363 aaKnown RBP21.12■□□□□ 0.97
AC004540.1-203ENST00000421862 TMEM161AQ9NX61 479 aa21.12■□□□□ 0.97
AC004540.1-203ENST00000421862 CEP131Q9UPN4 1083 aa21.12■□□□□ 0.97
AC004540.1-203ENST00000421862 PCDHGC5Q9Y5F6 944 aa21.12■□□□□ 0.97
AC004540.1-203ENST00000421862 PCDHA10Q9Y5I2 948 aa21.12■□□□□ 0.97
AC004540.1-203ENST00000421862 PSAPP07602 524 aa21.11■□□□□ 0.97
AC004540.1-203ENST00000421862 GNA11P29992 359 aa21.11■□□□□ 0.97
AC004540.1-203ENST00000421862 HSPA4P34932 840 aa21.11■□□□□ 0.97
AC004540.1-203ENST00000421862 NRIP1P48552 1158 aa21.11■□□□□ 0.97
AC004540.1-203ENST00000421862 FAM189BP81408 668 aa21.11■□□□□ 0.97
AC004540.1-203ENST00000421862 NTRK3Q16288 839 aa21.11■□□□□ 0.97
AC004540.1-203ENST00000421862 Q6ZUG5 572 aa21.11■□□□□ 0.97
AC004540.1-203ENST00000421862 FAM167AQ96KS9 214 aa21.11■□□□□ 0.97
AC004540.1-203ENST00000421862 RNF26Q9BY78 433 aaPredicted RBP21.11■□□□□ 0.97
AC004540.1-203ENST00000421862 KCNH6Q9H252 994 aa21.11■□□□□ 0.97
AC004540.1-203ENST00000421862 HCSTQ9UBK5 93 aa21.11■□□□□ 0.97
AC004540.1-203ENST00000421862 PCDHB12Q9Y5F1 795 aa21.11■□□□□ 0.97
AC004540.1-203ENST00000421862 FSD2A1L4K1 749 aa21.1■□□□□ 0.97
AC004540.1-203ENST00000421862 TBKBP1A7MCY6 615 aa21.1■□□□□ 0.97
AC004540.1-203ENST00000421862 FSCN2O14926 492 aa21.1■□□□□ 0.97
AC004540.1-203ENST00000421862 EDIL3O43854 480 aa21.1■□□□□ 0.97
AC004540.1-203ENST00000421862 VTNP04004 478 aa21.1■□□□□ 0.97
AC004540.1-203ENST00000421862 FAM102BQ5T8I3 360 aa21.1■□□□□ 0.97
AC004540.1-203ENST00000421862 RNF135Q8IUD6 432 aa21.1■□□□□ 0.97
AC004540.1-203ENST00000421862 COLGALT1Q8NBJ5 622 aa21.1■□□□□ 0.97
AC004540.1-203ENST00000421862 CWH43Q9H720 699 aa21.1■□□□□ 0.97
AC004540.1-203ENST00000421862 TLR9Q9NR96 1032 aa21.1■□□□□ 0.97
AC004540.1-203ENST00000421862 AAASQ9NRG9 546 aa21.1■□□□□ 0.97
AC004540.1-203ENST00000421862 MUTYHQ9UIF7 546 aa21.1■□□□□ 0.97
AC004540.1-203ENST00000421862 BARX2Q9UMQ3 279 aaPredicted RBP21.1■□□□□ 0.97
AC004540.1-203ENST00000421862 SNX14Q9Y5W7 946 aa21.1■□□□□ 0.97
AC004540.1-203ENST00000421862 MAGEB2O15479 319 aa21.09■□□□□ 0.97
AC004540.1-203ENST00000421862 FGF18O76093 207 aa21.09■□□□□ 0.97
AC004540.1-203ENST00000421862 CLCN3P51790 818 aa21.09■□□□□ 0.97
AC004540.1-203ENST00000421862 FGD1P98174 961 aa21.09■□□□□ 0.97
AC004540.1-203ENST00000421862 CBX2Q14781 532 aaPredicted RBP21.09■□□□□ 0.97
AC004540.1-203ENST00000421862 PRR16Q569H4 304 aa21.09■□□□□ 0.97
AC004540.1-203ENST00000421862 CKAP2LQ8IYA6 745 aa21.09■□□□□ 0.97
AC004540.1-203ENST00000421862 CCDC148Q8NFR7 591 aa21.09■□□□□ 0.97
AC004540.1-203ENST00000421862 RASGRP4Q8TDF6 673 aa21.09■□□□□ 0.97
AC004540.1-203ENST00000421862 JAKMIP1Q96N16 626 aaKnown RBP21.09■□□□□ 0.97
AC004540.1-203ENST00000421862 UIMC1Q96RL1 719 aa21.09■□□□□ 0.97
AC004540.1-203ENST00000421862 PPP1R16BQ96T49 567 aa21.09■□□□□ 0.97
AC004540.1-203ENST00000421862 CDCA3Q99618 268 aaPredicted RBP21.09■□□□□ 0.97
AC004540.1-203ENST00000421862 RNF19AQ9NV58 838 aa21.09■□□□□ 0.97
AC004540.1-203ENST00000421862 GABBR1Q9UBS5 961 aa21.09■□□□□ 0.97
AC004540.1-203ENST00000421862 TCEAL9Q9UHQ7 104 aa21.09■□□□□ 0.97
AC004540.1-203ENST00000421862 NAP1L2Q9ULW6 460 aaPredicted RBP21.09■□□□□ 0.97
AC004540.1-203ENST00000421862 LZTS1Q9Y250 596 aa21.09■□□□□ 0.97
AC004540.1-203ENST00000421862 ARID2Q68CP9 1835 aa21.08■□□□□ 0.97
AC004540.1-203ENST00000421862 WDR64B1ANS9 1081 aa21.08■□□□□ 0.97
AC004540.1-203ENST00000421862 LOC730098B7Z3J9 87 aa21.08■□□□□ 0.97
AC004540.1-203ENST00000421862 ZNF862O60290 1169 aa21.08■□□□□ 0.97
AC004540.1-203ENST00000421862 FGFR1P11362 822 aa21.08■□□□□ 0.97
AC004540.1-203ENST00000421862 LAG3P18627 525 aa21.08■□□□□ 0.97
AC004540.1-203ENST00000421862 EVCP57679 992 aa21.08■□□□□ 0.97
AC004540.1-203ENST00000421862 DUSP6Q16828 381 aa21.08■□□□□ 0.97
AC004540.1-203ENST00000421862 BLOC1S2Q6QNY1 142 aa21.08■□□□□ 0.97
AC004540.1-203ENST00000421862 HFE2Q6ZVN8 426 aa21.08■□□□□ 0.97
AC004540.1-203ENST00000421862 ZNF710Q8N1W2 664 aa21.08■□□□□ 0.97
AC004540.1-203ENST00000421862 VN1R2Q8NFZ6 395 aa21.08■□□□□ 0.97
AC004540.1-203ENST00000421862 BICD2Q8TD16 824 aa21.08■□□□□ 0.97
AC004540.1-203ENST00000421862 PHKBQ93100 1093 aa21.08■□□□□ 0.97
AC004540.1-203ENST00000421862 ADAMTS10Q9H324 1103 aa21.08■□□□□ 0.97
AC004540.1-203ENST00000421862 TYW1Q9NV66 732 aaKnown RBP21.08■□□□□ 0.97
AC004540.1-203ENST00000421862 USP15Q9Y4E8 981 aaPredicted RBP21.08■□□□□ 0.97
AC004540.1-203ENST00000421862 OATP04181 439 aa21.07■□□□□ 0.96
AC004540.1-203ENST00000421862 IFNAR1P17181 557 aa21.07■□□□□ 0.96
AC004540.1-203ENST00000421862 RPS6KB1P23443 525 aa21.07■□□□□ 0.96
AC004540.1-203ENST00000421862 PLCB3Q01970 1234 aa21.07■□□□□ 0.96
AC004540.1-203ENST00000421862 KCNC3Q14003 757 aa21.07■□□□□ 0.96
AC004540.1-203ENST00000421862 PDE12Q6L8Q7 609 aaKnown RBP21.07■□□□□ 0.96
AC004540.1-203ENST00000421862 RBM23Q86U06 439 aaKnown RBP21.07■□□□□ 0.96
AC004540.1-203ENST00000421862 METTL13Q8N6R0 699 aa21.07■□□□□ 0.96
AC004540.1-203ENST00000421862 TMEM117Q9H0C3 514 aa21.07■□□□□ 0.96
AC004540.1-203ENST00000421862 ATP6V0A4Q9HBG4 840 aa21.07■□□□□ 0.96
AC004540.1-203ENST00000421862 MSH4O15457 936 aa21.06■□□□□ 0.96
AC004540.1-203ENST00000421862 IBSPP21815 317 aaPredicted RBP21.06■□□□□ 0.96
AC004540.1-203ENST00000421862 ERVFC1P60507 584 aa21.06■□□□□ 0.96
AC004540.1-203ENST00000421862 PRKCEQ02156 737 aa21.06■□□□□ 0.96
AC004540.1-203ENST00000421862 SPOUT1Q5T280 376 aaKnown RBP21.06■□□□□ 0.96
AC004540.1-203ENST00000421862 THNSL1Q8IYQ7 743 aa21.06■□□□□ 0.96
AC004540.1-203ENST00000421862 SUSD6Q92537 303 aa21.06■□□□□ 0.96
AC004540.1-203ENST00000421862 MAP7D2Q96T17 732 aa21.06■□□□□ 0.96
AC004540.1-203ENST00000421862 RIT2Q99578 217 aa21.06■□□□□ 0.96
AC004540.1-203ENST00000421862 TLE6Q9H808 572 aa21.06■□□□□ 0.96
AC004540.1-203ENST00000421862 DENND4AQ7Z401 1863 aa21.06■□□□□ 0.96
AC004540.1-203ENST00000421862 HOXA2O43364 376 aa21.05■□□□□ 0.96
AC004540.1-203ENST00000421862 PPFIA3O75145 1194 aa21.05■□□□□ 0.96
AC004540.1-203ENST00000421862 ATF7P17544 494 aaPredicted RBP21.05■□□□□ 0.96
AC004540.1-203ENST00000421862 EIF4BP23588 611 aaKnown RBP21.05■□□□□ 0.96
AC004540.1-203ENST00000421862 NLRP11P59045 1033 aaKnown RBP21.05■□□□□ 0.96
AC004540.1-203ENST00000421862 UGCGQ16739 394 aa21.05■□□□□ 0.96
AC004540.1-203ENST00000421862 EFCAB12Q6NXP0 572 aa21.05■□□□□ 0.96
AC004540.1-203ENST00000421862 TMEM184AQ6ZMB5 413 aa21.05■□□□□ 0.96
AC004540.1-203ENST00000421862 LRRC55Q6ZSA7 311 aa21.05■□□□□ 0.96
AC004540.1-203ENST00000421862 LRRC43Q8N309 656 aa21.05■□□□□ 0.96
AC004540.1-203ENST00000421862 LRRC71Q8N4P6 559 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms