RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 PLA2G4FQ68DD2 849 aa11.98□□□□□ -0.49
DDX56-203ENST00000421223 FRMD5Q7Z6J6 570 aa11.98□□□□□ -0.49
DDX56-203ENST00000421223 AJAP1Q9UKB5 411 aaPredicted RBP11.98□□□□□ -0.49
DDX56-203ENST00000421223 GOLGA8IPA6NC78 632 aa11.97□□□□□ -0.49
DDX56-203ENST00000421223 GOLGA8JA6NMD2 632 aa11.97□□□□□ -0.49
DDX56-203ENST00000421223 CCDC169A6NNP5 214 aa11.97□□□□□ -0.49
DDX56-203ENST00000421223 PHF20L1A8MW92 1017 aa11.97□□□□□ -0.49
DDX56-203ENST00000421223 POTEB2H3BUK9 544 aa11.97□□□□□ -0.49
DDX56-203ENST00000421223 ATP9AO75110 1047 aa11.97□□□□□ -0.49
DDX56-203ENST00000421223 LRRN2O75325 713 aa11.97□□□□□ -0.49
DDX56-203ENST00000421223 GAP43P17677 238 aa11.97□□□□□ -0.49
DDX56-203ENST00000421223 PSMC2P35998 433 aaKnown RBP11.97□□□□□ -0.49
DDX56-203ENST00000421223 PTGER2P43116 358 aa11.97□□□□□ -0.49
DDX56-203ENST00000421223 CKAP4Q07065 602 aaKnown RBP11.97□□□□□ -0.49
DDX56-203ENST00000421223 TKFCQ3LXA3 575 aa11.97□□□□□ -0.49
DDX56-203ENST00000421223 KLHDC7AQ5VTJ3 777 aa11.97□□□□□ -0.49
DDX56-203ENST00000421223 EPM2AIP1Q7L775 607 aaPredicted RBP11.97□□□□□ -0.49
DDX56-203ENST00000421223 SYTL5Q8TDW5 730 aaPredicted RBP11.97□□□□□ -0.49
DDX56-203ENST00000421223 SLC35C1Q96A29 364 aa11.97□□□□□ -0.49
DDX56-203ENST00000421223 OSBPL9Q96SU4 736 aa11.97□□□□□ -0.49
DDX56-203ENST00000421223 GBP3Q9H0R5 595 aa11.97□□□□□ -0.49
DDX56-203ENST00000421223 LUC7LQ9NQ29 371 aaKnown RBP11.97□□□□□ -0.49
DDX56-203ENST00000421223 SNX12Q9UMY4 172 aa11.97□□□□□ -0.49
DDX56-203ENST00000421223 RIPK3Q9Y572 518 aa11.97□□□□□ -0.49
DDX56-203ENST00000421223 STK24Q9Y6E0 443 aa11.97□□□□□ -0.49
DDX56-203ENST00000421223 NFKBIEO00221 500 aa11.97□□□□□ -0.49
DDX56-203ENST00000421223 TBC1D12O60347 775 aa11.97□□□□□ -0.49
DDX56-203ENST00000421223 PEX10O60683 326 aa11.97□□□□□ -0.49
DDX56-203ENST00000421223 N4BP1O75113 896 aaKnown RBP11.97□□□□□ -0.49
DDX56-203ENST00000421223 ZBED4O75132 1171 aa11.97□□□□□ -0.49
DDX56-203ENST00000421223 CLSTN1O94985 981 aa11.97□□□□□ -0.49
DDX56-203ENST00000421223 MRPS9P82933 396 aaKnown RBP11.97□□□□□ -0.49
DDX56-203ENST00000421223 ITGB3BPQ13352 177 aaPredicted RBP11.97□□□□□ -0.49
DDX56-203ENST00000421223 BAATQ14032 418 aaPredicted RBP11.97□□□□□ -0.49
DDX56-203ENST00000421223 BEND6Q5SZJ8 279 aaPredicted RBP11.97□□□□□ -0.49
DDX56-203ENST00000421223 FAM102BQ5T8I3 360 aa11.97□□□□□ -0.49
DDX56-203ENST00000421223 RNF207Q6ZRF8 634 aa11.97□□□□□ -0.49
DDX56-203ENST00000421223 ZNF720Q7Z2F6 126 aa11.97□□□□□ -0.49
DDX56-203ENST00000421223 HDAC7Q8WUI4 952 aa11.97□□□□□ -0.49
DDX56-203ENST00000421223 ELMO3Q96BJ8 720 aa11.97□□□□□ -0.49
DDX56-203ENST00000421223 C10orf71Q711Q0 1435 aa11.97□□□□□ -0.49
DDX56-203ENST00000421223 GREB1LQ9C091 1923 aaPredicted RBP11.97□□□□□ -0.49
DDX56-203ENST00000421223 PAFAH1B1P43034 410 aa11.97□□□□□ -0.49
DDX56-203ENST00000421223 SOX10P56693 466 aa11.97□□□□□ -0.49
DDX56-203ENST00000421223 XKR9Q5GH70 373 aa11.97□□□□□ -0.49
DDX56-203ENST00000421223 ANGEL2Q5VTE6 544 aaKnown RBP11.97□□□□□ -0.49
DDX56-203ENST00000421223 FKBP1CQ5VVH2 108 aa11.97□□□□□ -0.49
DDX56-203ENST00000421223 FAM43BQ6ZT52 329 aaPredicted RBP11.97□□□□□ -0.49
DDX56-203ENST00000421223 HDXQ7Z353 690 aa11.97□□□□□ -0.49
DDX56-203ENST00000421223 ZNF571Q7Z3V5 609 aaPredicted RBP11.97□□□□□ -0.49
DDX56-203ENST00000421223 U2AF1L4Q8WU68 220 aaKnown RBP11.97□□□□□ -0.49
DDX56-203ENST00000421223 CLEC4DQ8WXI8 215 aa11.97□□□□□ -0.49
DDX56-203ENST00000421223 KIFC3Q9BVG8 833 aa11.97□□□□□ -0.49
DDX56-203ENST00000421223 GANQ9H2C0 597 aa11.97□□□□□ -0.49
DDX56-203ENST00000421223 WDR46O15213 610 aaKnown RBP11.96□□□□□ -0.49
DDX56-203ENST00000421223 ABCB4P21439 1286 aa11.96□□□□□ -0.49
DDX56-203ENST00000421223 USP14P54578 494 aa11.96□□□□□ -0.49
DDX56-203ENST00000421223 PEX3P56589 373 aa11.96□□□□□ -0.49
DDX56-203ENST00000421223 SETQ01105 290 aaPredicted RBP11.96□□□□□ -0.49
DDX56-203ENST00000421223 R3HDM1Q15032 1099 aaKnown RBP11.96□□□□□ -0.49
DDX56-203ENST00000421223 SLC18A3Q16572 532 aa11.96□□□□□ -0.49
DDX56-203ENST00000421223 CCDC70Q6NSX1 233 aa11.96□□□□□ -0.49
DDX56-203ENST00000421223 MCF2L2Q86YR7 1114 aa11.96□□□□□ -0.49
DDX56-203ENST00000421223 PROCA1Q8NCQ7 364 aaPredicted RBP11.96□□□□□ -0.49
DDX56-203ENST00000421223 NUCKS1Q9H1E3 243 aaKnown RBP11.96□□□□□ -0.49
DDX56-203ENST00000421223 METTL14Q9HCE5 456 aaKnown RBP11.96□□□□□ -0.49
DDX56-203ENST00000421223 PICK1Q9NRD5 415 aa11.96□□□□□ -0.49
DDX56-203ENST00000421223 SSU72P8A0A1W2PR75 194 aa11.96□□□□□ -0.5
DDX56-203ENST00000421223 SLC16A4O15374 487 aa11.96□□□□□ -0.5
DDX56-203ENST00000421223 STXBP4Q6ZWJ1 553 aa11.96□□□□□ -0.5
DDX56-203ENST00000421223 MSANTD4Q8NCY6 345 aa11.96□□□□□ -0.5
DDX56-203ENST00000421223 RBM46Q8TBY0 533 aaKnown RBP11.96□□□□□ -0.5
DDX56-203ENST00000421223 TEPSINQ96N21 525 aa11.96□□□□□ -0.5
DDX56-203ENST00000421223 LRRC1Q9BTT6 524 aa11.96□□□□□ -0.5
DDX56-203ENST00000421223 UBXN6Q9BZV1 441 aa11.96□□□□□ -0.5
DDX56-203ENST00000421223 AGPAT3Q9NRZ7 376 aa11.96□□□□□ -0.5
DDX56-203ENST00000421223 RNF146Q9NTX7 359 aa11.96□□□□□ -0.5
DDX56-203ENST00000421223 ATP8B1O43520 1251 aa11.95□□□□□ -0.5
DDX56-203ENST00000421223 CASP8Q14790 479 aa11.95□□□□□ -0.5
DDX56-203ENST00000421223 UGCGQ16739 394 aa11.95□□□□□ -0.5
DDX56-203ENST00000421223 ASTE1Q2TB18 679 aaPredicted RBP11.95□□□□□ -0.5
DDX56-203ENST00000421223 CBWD6Q4V339 395 aa11.95□□□□□ -0.5
DDX56-203ENST00000421223 CBWD3Q5JTY5 395 aa11.95□□□□□ -0.5
DDX56-203ENST00000421223 CBWD5Q5RIA9 395 aa11.95□□□□□ -0.5
DDX56-203ENST00000421223 SNRNP48Q6IEG0 339 aaKnown RBP11.95□□□□□ -0.5
DDX56-203ENST00000421223 ALKBH5Q6P6C2 394 aaKnown RBP11.95□□□□□ -0.5
DDX56-203ENST00000421223 CREG2Q8IUH2 290 aa11.95□□□□□ -0.5
DDX56-203ENST00000421223 ZSWIM2Q8NEG5 633 aa11.95□□□□□ -0.5
DDX56-203ENST00000421223 CCDC127Q96BQ5 260 aa11.95□□□□□ -0.5
DDX56-203ENST00000421223 EDEM3Q9BZQ6 932 aa11.95□□□□□ -0.5
DDX56-203ENST00000421223 OLFML3Q9NRN5 406 aa11.95□□□□□ -0.5
DDX56-203ENST00000421223 VPS18Q9P253 973 aa11.95□□□□□ -0.5
DDX56-203ENST00000421223 HYOU1Q9Y4L1 999 aa11.95□□□□□ -0.5
DDX56-203ENST00000421223 ANO9A1A5B4 782 aa11.95□□□□□ -0.5
DDX56-203ENST00000421223 H3BQF6 201 aa11.95□□□□□ -0.5
DDX56-203ENST00000421223 P4HBP07237 508 aaKnown RBP11.95□□□□□ -0.5
DDX56-203ENST00000421223 QARSP47897 775 aaKnown RBP11.95□□□□□ -0.5
DDX56-203ENST00000421223 IQCEQ6IPM2 695 aa11.95□□□□□ -0.5
DDX56-203ENST00000421223 LARSQ9P2J5 1176 aaKnown RBP11.95□□□□□ -0.5
DDX56-203ENST00000421223 YWHABP31946 246 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms