RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 FAM96AQ9H5X1 160 aa13.21□□□□□ -0.29
CLCN4-203ENST00000421085 SASH1O94885 1247 aa13.21□□□□□ -0.3
CLCN4-203ENST00000421085 TAF1BQ53T94 588 aaPredicted RBP13.21□□□□□ -0.3
CLCN4-203ENST00000421085 VIPAS39Q9H9C1 493 aa13.21□□□□□ -0.3
CLCN4-203ENST00000421085 TCP10L2B9ZVM9 353 aa13.21□□□□□ -0.3
CLCN4-203ENST00000421085 CHRNA3P32297 505 aa13.21□□□□□ -0.3
CLCN4-203ENST00000421085 HSPA9P38646 679 aaKnown RBP13.21□□□□□ -0.3
CLCN4-203ENST00000421085 NEK2P51955 445 aa13.21□□□□□ -0.3
CLCN4-203ENST00000421085 CDO1Q16878 200 aa13.21□□□□□ -0.3
CLCN4-203ENST00000421085 FAM160B1Q5W0V3 765 aa13.21□□□□□ -0.3
CLCN4-203ENST00000421085 ADA2Q9NZK5 511 aa13.21□□□□□ -0.3
CLCN4-203ENST00000421085 TRIM33Q9UPN9 1127 aa13.21□□□□□ -0.3
CLCN4-203ENST00000421085 SPDYE2BA6NHP3 402 aa13.2□□□□□ -0.3
CLCN4-203ENST00000421085 KDM1AO60341 852 aa13.2□□□□□ -0.3
CLCN4-203ENST00000421085 SPDYE6P0CI01 402 aa13.2□□□□□ -0.3
CLCN4-203ENST00000421085 DAB2P98082 770 aa13.2□□□□□ -0.3
CLCN4-203ENST00000421085 CDC37Q16543 378 aaPredicted RBP13.2□□□□□ -0.3
CLCN4-203ENST00000421085 TEDDM1Q5T9Z0 273 aa13.2□□□□□ -0.3
CLCN4-203ENST00000421085 RASSF3Q86WH2 238 aa13.2□□□□□ -0.3
CLCN4-203ENST00000421085 NCLNQ969V3 563 aa13.2□□□□□ -0.3
CLCN4-203ENST00000421085 CEP170P1Q96L14 293 aa13.2□□□□□ -0.3
CLCN4-203ENST00000421085 CYP2D7A0A087X1C5 515 aa13.2□□□□□ -0.3
CLCN4-203ENST00000421085 C7orf31Q8N865 590 aa13.2□□□□□ -0.3
CLCN4-203ENST00000421085 PAGR1Q9BTK6 254 aa13.2□□□□□ -0.3
CLCN4-203ENST00000421085 LZTS1Q9Y250 596 aa13.2□□□□□ -0.3
CLCN4-203ENST00000421085 ATP2B4P23634 1241 aa13.2□□□□□ -0.3
CLCN4-203ENST00000421085 ERFP50548 548 aa13.2□□□□□ -0.3
CLCN4-203ENST00000421085 TFDP1Q14186 410 aa13.2□□□□□ -0.3
CLCN4-203ENST00000421085 SCARA5Q6ZMJ2 495 aa13.2□□□□□ -0.3
CLCN4-203ENST00000421085 ERICH1Q86X53 443 aa13.2□□□□□ -0.3
CLCN4-203ENST00000421085 DTX3LQ8TDB6 740 aa13.2□□□□□ -0.3
CLCN4-203ENST00000421085 ARHGEF9O43307 516 aa13.2□□□□□ -0.3
CLCN4-203ENST00000421085 TAC1P20366 129 aa13.2□□□□□ -0.3
CLCN4-203ENST00000421085 FAM83BQ5T0W9 1011 aa13.2□□□□□ -0.3
CLCN4-203ENST00000421085 SLC7A3Q8WY07 619 aa13.2□□□□□ -0.3
CLCN4-203ENST00000421085 DPF2Q92785 391 aa13.2□□□□□ -0.3
CLCN4-203ENST00000421085 FNDC3AQ9Y2H6 1198 aaKnown RBP13.2□□□□□ -0.3
CLCN4-203ENST00000421085 FAM187AA6NFU0 413 aa13.2□□□□□ -0.3
CLCN4-203ENST00000421085 FGFR4P22455 802 aa13.2□□□□□ -0.3
CLCN4-203ENST00000421085 TMEM154Q6P9G4 183 aa13.2□□□□□ -0.3
CLCN4-203ENST00000421085 ZBTB33Q86T24 672 aa13.2□□□□□ -0.3
CLCN4-203ENST00000421085 RBM41Q96IZ5 413 aaKnown RBP13.2□□□□□ -0.3
CLCN4-203ENST00000421085 SLITRK6Q9H5Y7 841 aa13.2□□□□□ -0.3
CLCN4-203ENST00000421085 MRPL40Q9NQ50 206 aaKnown RBP13.2□□□□□ -0.3
CLCN4-203ENST00000421085 STX18Q9P2W9 335 aaKnown RBP13.2□□□□□ -0.3
CLCN4-203ENST00000421085 H0YIN7 160 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 SUPT3HO75486 399 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 KCNA4P22459 653 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 PGM1P36871 562 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 PTPN12Q05209 780 aaKnown RBP13.19□□□□□ -0.3
CLCN4-203ENST00000421085 MKRN3Q13064 507 aaKnown RBP13.19□□□□□ -0.3
CLCN4-203ENST00000421085 CTTNQ14247 550 aaKnown RBP13.19□□□□□ -0.3
CLCN4-203ENST00000421085 CCDC137Q6PK04 289 aaKnown RBP13.19□□□□□ -0.3
CLCN4-203ENST00000421085 RIN2Q8WYP3 895 aaPredicted RBP13.19□□□□□ -0.3
CLCN4-203ENST00000421085 DTNBP1Q96EV8 351 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 VPS11Q9H270 941 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 SUN2Q9UH99 717 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 ARL2BPQ9Y2Y0 163 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 ABCC10Q5T3U5 1492 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 KPNA7A9QM74 516 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 NPR1P16066 1061 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 COPS2P61201 443 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 BBS5Q8N3I7 341 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 CDC26Q8NHZ8 85 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 GTSE1Q9NYZ3 720 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 AMACRQ9UHK6 382 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 PHF20L1A8MW92 1017 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 KCNH2Q12809 1159 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 FLOT2Q14254 428 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 RARS2Q5T160 578 aaKnown RBP13.19□□□□□ -0.3
CLCN4-203ENST00000421085 KRT39Q6A163 491 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 KIAA0825Q8IV33 1275 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 CDCA7Q9BWT1 371 aaPredicted RBP13.19□□□□□ -0.3
CLCN4-203ENST00000421085 HPCAL4Q9UM19 191 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 MAP3K15Q6ZN16 1313 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 CHN1P15882 459 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 KLC1Q07866 573 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 NCAPHQ15003 741 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 MORF4L2Q15014 288 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 PROM2Q8N271 834 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 SNF8Q96H20 258 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 EHD2Q9NZN4 543 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 ADAM22Q9P0K1 906 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 TBX22Q9Y458 520 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 WDR62O43379 1518 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 ZNF804BA4D1E1 1349 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 INO80B-WBP1J3KQ70 363 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 ZNF18P17022 549 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 CYTH1Q15438 398 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 LONP2Q86WA8 852 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 ZBED8Q8IZ13 594 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 PPM1NQ8N819 430 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 RUBCNQ92622 972 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 HEXIM2Q96MH2 286 aaKnown RBP13.19□□□□□ -0.3
CLCN4-203ENST00000421085 LBHD1Q9BQE6 289 aaPredicted RBP13.19□□□□□ -0.3
CLCN4-203ENST00000421085 SLC13A1Q9BZW2 595 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 INO80BQ9C086 356 aaPredicted RBP13.19□□□□□ -0.3
CLCN4-203ENST00000421085 BHMT2Q9H2M3 363 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 SNX25Q9H3E2 840 aa13.19□□□□□ -0.3
CLCN4-203ENST00000421085 DOK7Q18PE1 504 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms