RNA–Protein interactions for RNA: ENST00000420103.1

CHCHD4-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 3

Gene CHCHD4, Length 584 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-203ENST00000420103 FAM189BP81408 668 aa13.34□□□□□ -0.27
CHCHD4-203ENST00000420103 SIGLEC14Q08ET2 396 aa13.34□□□□□ -0.27
CHCHD4-203ENST00000420103 DSC3Q14574 896 aa13.34□□□□□ -0.27
CHCHD4-203ENST00000420103 KIZQ2M2Z5 673 aa13.34□□□□□ -0.27
CHCHD4-203ENST00000420103 SPOUT1Q5T280 376 aaKnown RBP13.34□□□□□ -0.27
CHCHD4-203ENST00000420103 PLPP4Q5VZY2 271 aa13.34□□□□□ -0.27
CHCHD4-203ENST00000420103 PPP1R18Q6NYC8 613 aa13.34□□□□□ -0.27
CHCHD4-203ENST00000420103 LLGL2Q6P1M3 1020 aa13.34□□□□□ -0.27
CHCHD4-203ENST00000420103 Q6ZUG5 572 aa13.34□□□□□ -0.27
CHCHD4-203ENST00000420103 PPP2R3CQ969Q6 453 aa13.34□□□□□ -0.27
CHCHD4-203ENST00000420103 JAKMIP1Q96N16 626 aaKnown RBP13.34□□□□□ -0.27
CHCHD4-203ENST00000420103 BARHL2Q9NY43 387 aa13.34□□□□□ -0.27
CHCHD4-203ENST00000420103 NFASCO94856 1347 aa13.34□□□□□ -0.27
CHCHD4-203ENST00000420103 FNDC1Q4ZHG4 1894 aaPredicted RBP13.33□□□□□ -0.27
CHCHD4-203ENST00000420103 SMCO2A6NFE2 343 aa13.33□□□□□ -0.28
CHCHD4-203ENST00000420103 FAM86B1E9PN63 330 aa13.33□□□□□ -0.28
CHCHD4-203ENST00000420103 H0Y858 1186 aa13.33□□□□□ -0.28
CHCHD4-203ENST00000420103 M0QZ92 97 aa13.33□□□□□ -0.28
CHCHD4-203ENST00000420103 MEIS1O00470 390 aa13.33□□□□□ -0.28
CHCHD4-203ENST00000420103 GPR32O75388 356 aa13.33□□□□□ -0.28
CHCHD4-203ENST00000420103 VTNP04004 478 aa13.33□□□□□ -0.28
CHCHD4-203ENST00000420103 FAM86B2P0C5J1 330 aa13.33□□□□□ -0.28
CHCHD4-203ENST00000420103 TECP42680 631 aa13.33□□□□□ -0.28
CHCHD4-203ENST00000420103 METAP2P50579 478 aaKnown RBP eCLIP13.33□□□□□ -0.28
CHCHD4-203ENST00000420103 PTPN21Q16825 1174 aa13.33□□□□□ -0.28
CHCHD4-203ENST00000420103 CEP55Q53EZ4 464 aa13.33□□□□□ -0.28
CHCHD4-203ENST00000420103 JAKMIP3Q5VZ66 844 aa13.33□□□□□ -0.28
CHCHD4-203ENST00000420103 ANKRD54Q6NXT1 300 aa13.33□□□□□ -0.28
CHCHD4-203ENST00000420103 KANK3Q6NY19 840 aa13.33□□□□□ -0.28
CHCHD4-203ENST00000420103 TMEM184AQ6ZMB5 413 aa13.33□□□□□ -0.28
CHCHD4-203ENST00000420103 SLC24A5Q71RS6 500 aa13.33□□□□□ -0.28
CHCHD4-203ENST00000420103 TRMT1LQ7Z2T5 733 aaKnown RBP13.33□□□□□ -0.28
CHCHD4-203ENST00000420103 SUGP1Q8IWZ8 645 aaKnown RBP13.33□□□□□ -0.28
CHCHD4-203ENST00000420103 NME8Q8N427 588 aa13.33□□□□□ -0.28
CHCHD4-203ENST00000420103 KCNB2Q92953 911 aa13.33□□□□□ -0.28
CHCHD4-203ENST00000420103 BRF1Q92994 677 aa13.33□□□□□ -0.28
CHCHD4-203ENST00000420103 ZNF668Q96K58 619 aaPredicted RBP13.33□□□□□ -0.28
CHCHD4-203ENST00000420103 CASD1Q96PB1 797 aa13.33□□□□□ -0.28
CHCHD4-203ENST00000420103 OSMRQ99650 979 aa13.33□□□□□ -0.28
CHCHD4-203ENST00000420103 PCDHB12Q9Y5F1 795 aa13.33□□□□□ -0.28
CHCHD4-203ENST00000420103 NID2Q14112 1375 aa13.32□□□□□ -0.28
CHCHD4-203ENST00000420103 SPTBN4Q9H254 2564 aa13.32□□□□□ -0.28
CHCHD4-203ENST00000420103 C22orf31O95567 290 aa13.32□□□□□ -0.28
CHCHD4-203ENST00000420103 WEE2P0C1S8 567 aa13.32□□□□□ -0.28
CHCHD4-203ENST00000420103 ATF7P17544 494 aaPredicted RBP13.32□□□□□ -0.28
CHCHD4-203ENST00000420103 HSPA4P34932 840 aa13.32□□□□□ -0.28
CHCHD4-203ENST00000420103 SREBF1P36956 1147 aa13.32□□□□□ -0.28
CHCHD4-203ENST00000420103 UBE3AQ05086 875 aa13.32□□□□□ -0.28
CHCHD4-203ENST00000420103 KRT32Q14532 448 aa13.32□□□□□ -0.28
CHCHD4-203ENST00000420103 PKN1Q16512 942 aa13.32□□□□□ -0.28
CHCHD4-203ENST00000420103 PFKFB3Q16875 520 aaPredicted RBP13.32□□□□□ -0.28
CHCHD4-203ENST00000420103 SWSAP1Q6NVH7 229 aa13.32□□□□□ -0.28
CHCHD4-203ENST00000420103 THNSL1Q8IYQ7 743 aa13.32□□□□□ -0.28
CHCHD4-203ENST00000420103 PHKBQ93100 1093 aa13.32□□□□□ -0.28
CHCHD4-203ENST00000420103 TCF25Q9BQ70 676 aa13.32□□□□□ -0.28
CHCHD4-203ENST00000420103 SDF4Q9BRK5 362 aa13.32□□□□□ -0.28
CHCHD4-203ENST00000420103 WDR81Q562E7 1941 aa13.31□□□□□ -0.28
CHCHD4-203ENST00000420103 IGLV3-22A0A075B6J6 115 aa13.31□□□□□ -0.28
CHCHD4-203ENST00000420103 DENND3A2RUS2 1198 aa13.31□□□□□ -0.28
CHCHD4-203ENST00000420103 hCG_1984214I3L0E3 225 aa13.31□□□□□ -0.28
CHCHD4-203ENST00000420103 HBP1O60381 514 aa13.31□□□□□ -0.28
CHCHD4-203ENST00000420103 GFRA3O60609 400 aa13.31□□□□□ -0.28
CHCHD4-203ENST00000420103 ZNF713Q8N859 430 aaPredicted RBP13.31□□□□□ -0.28
CHCHD4-203ENST00000420103 RASGRP4Q8TDF6 673 aa13.31□□□□□ -0.28
CHCHD4-203ENST00000420103 CRYGNQ8WXF5 182 aa13.31□□□□□ -0.28
CHCHD4-203ENST00000420103 MRPS27Q92552 414 aaKnown RBP13.31□□□□□ -0.28
CHCHD4-203ENST00000420103 CCDC136Q96JN2 1154 aa13.31□□□□□ -0.28
CHCHD4-203ENST00000420103 C2CD4DB7Z1M9 353 aa13.3□□□□□ -0.28
CHCHD4-203ENST00000420103 BACH1O14867 736 aa13.3□□□□□ -0.28
CHCHD4-203ENST00000420103 EDIL3O43854 480 aa13.3□□□□□ -0.28
CHCHD4-203ENST00000420103 ST18O60284 1047 aa13.3□□□□□ -0.28
CHCHD4-203ENST00000420103 BRD1O95696 1058 aa13.3□□□□□ -0.28
CHCHD4-203ENST00000420103 RPLP2P05387 115 aaKnown RBP13.3□□□□□ -0.28
CHCHD4-203ENST00000420103 RPS6KB1P23443 525 aa13.3□□□□□ -0.28
CHCHD4-203ENST00000420103 CLCN3P51790 818 aa13.3□□□□□ -0.28
CHCHD4-203ENST00000420103 RCAN1P53805 252 aa13.3□□□□□ -0.28
CHCHD4-203ENST00000420103 FGD1P98174 961 aa13.3□□□□□ -0.28
CHCHD4-203ENST00000420103 PLCB3Q01970 1234 aa13.3□□□□□ -0.28
CHCHD4-203ENST00000420103 AP3B2Q13367 1082 aa13.3□□□□□ -0.28
CHCHD4-203ENST00000420103 CLLU1OSQ5K130 101 aa13.3□□□□□ -0.28
CHCHD4-203ENST00000420103 PDXDC2PQ6P474 469 aa13.3□□□□□ -0.28
CHCHD4-203ENST00000420103 BLOC1S2Q6QNY1 142 aa13.3□□□□□ -0.28
CHCHD4-203ENST00000420103 KCNT2Q6UVM3 1135 aa13.3□□□□□ -0.28
CHCHD4-203ENST00000420103 ASCL5Q7RTU5 278 aa13.3□□□□□ -0.28
CHCHD4-203ENST00000420103 C12orf76Q8N812 135 aaPredicted RBP13.3□□□□□ -0.28
CHCHD4-203ENST00000420103 TMEM105Q8N8V8 129 aa13.3□□□□□ -0.28
CHCHD4-203ENST00000420103 KREMEN2Q8NCW0 462 aa13.3□□□□□ -0.28
CHCHD4-203ENST00000420103 RIPOR3Q96MK2 946 aa13.3□□□□□ -0.28
CHCHD4-203ENST00000420103 POMKQ9H5K3 350 aa13.3□□□□□ -0.28
CHCHD4-203ENST00000420103 ATP6V0A4Q9HBG4 840 aa13.3□□□□□ -0.28
CHCHD4-203ENST00000420103 NCOA5Q9HCD5 579 aaKnown RBP13.3□□□□□ -0.28
CHCHD4-203ENST00000420103 ZNF302Q9NR11 478 aa13.3□□□□□ -0.28
CHCHD4-203ENST00000420103 C1orf112Q9NSG2 853 aa13.3□□□□□ -0.28
CHCHD4-203ENST00000420103 TMEM161AQ9NX61 479 aa13.3□□□□□ -0.28
CHCHD4-203ENST00000420103 PTPRZ1P23471 2315 aaPredicted RBP13.3□□□□□ -0.28
CHCHD4-203ENST00000420103 PLXNA3P51805 1871 aa13.29□□□□□ -0.28
CHCHD4-203ENST00000420103 NT5C1B-RDH14C9J2C7 533 aa13.29□□□□□ -0.28
CHCHD4-203ENST00000420103 GPR182O15218 404 aa13.29□□□□□ -0.28
CHCHD4-203ENST00000420103 FOSP01100 380 aaPredicted RBP13.29□□□□□ -0.28
CHCHD4-203ENST00000420103 ASGR2P07307 311 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms