RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 CFLARO15519 480 aa12.01□□□□□ -0.49
PTCH1-205ENST00000418258 ZNF668Q96K58 619 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-205ENST00000418258 PPP1R13BQ96KQ4 1090 aa12.01□□□□□ -0.49
PTCH1-205ENST00000418258 ANP32DO95626 131 aa12.01□□□□□ -0.49
PTCH1-205ENST00000418258 BBS9Q3SYG4 887 aa12.01□□□□□ -0.49
PTCH1-205ENST00000418258 TTC23LQ6PF05 361 aa12.01□□□□□ -0.49
PTCH1-205ENST00000418258 TRPC7Q9HCX4 862 aa12.01□□□□□ -0.49
PTCH1-205ENST00000418258 ZNF212Q9UDV6 495 aa12.01□□□□□ -0.49
PTCH1-205ENST00000418258 PCDHA13Q9Y5I0 950 aa12.01□□□□□ -0.49
PTCH1-205ENST00000418258 GPSM2P81274 684 aa12□□□□□ -0.49
PTCH1-205ENST00000418258 CC2D1AQ6P1N0 951 aaPredicted RBP12□□□□□ -0.49
PTCH1-205ENST00000418258 TOGARAM2Q6ZUX3 1019 aa12□□□□□ -0.49
PTCH1-205ENST00000418258 DDX53Q86TM3 631 aaKnown RBP12□□□□□ -0.49
PTCH1-205ENST00000418258 CCDC197Q8NCU1 140 aa12□□□□□ -0.49
PTCH1-205ENST00000418258 CLCA2Q9UQC9 943 aa12□□□□□ -0.49
PTCH1-205ENST00000418258 ZNF335Q9H4Z2 1342 aaPredicted RBP12□□□□□ -0.49
PTCH1-205ENST00000418258 LRRC63Q05C16 580 aa12□□□□□ -0.49
PTCH1-205ENST00000418258 ZSCAN26Q16670 478 aa12□□□□□ -0.49
PTCH1-205ENST00000418258 NSUN6Q8TEA1 469 aaKnown RBP12□□□□□ -0.49
PTCH1-205ENST00000418258 NR1H4Q96RI1 486 aaPredicted RBP12□□□□□ -0.49
PTCH1-205ENST00000418258 FMO2Q99518 471 aa12□□□□□ -0.49
PTCH1-205ENST00000418258 FAM213AQ9BRX8 229 aa12□□□□□ -0.49
PTCH1-205ENST00000418258 MED4Q9NPJ6 270 aa12□□□□□ -0.49
PTCH1-205ENST00000418258 GINM1Q9NU53 330 aa12□□□□□ -0.49
PTCH1-205ENST00000418258 ZBTB5O15062 677 aa12□□□□□ -0.49
PTCH1-205ENST00000418258 SPP2Q13103 211 aa12□□□□□ -0.49
PTCH1-205ENST00000418258 SPATS2Q86XZ4 545 aaKnown RBP12□□□□□ -0.49
PTCH1-205ENST00000418258 PBXIP1Q96AQ6 731 aa12□□□□□ -0.49
PTCH1-205ENST00000418258 ANAPC7Q9UJX3 599 aa12□□□□□ -0.49
PTCH1-205ENST00000418258 EPB41L3Q9Y2J2 1087 aaPredicted RBP12□□□□□ -0.49
PTCH1-205ENST00000418258 PHLPP2Q6ZVD8 1323 aa12□□□□□ -0.49
PTCH1-205ENST00000418258 IQCA1LA6NCM1 817 aa12□□□□□ -0.49
PTCH1-205ENST00000418258 HADHAP40939 763 aa12□□□□□ -0.49
PTCH1-205ENST00000418258 VCPP55072 806 aaKnown RBP12□□□□□ -0.49
PTCH1-205ENST00000418258 AP1B1Q10567 949 aa12□□□□□ -0.49
PTCH1-205ENST00000418258 TAF11Q15544 211 aa12□□□□□ -0.49
PTCH1-205ENST00000418258 TBC1D9BQ66K14 1250 aa12□□□□□ -0.49
PTCH1-205ENST00000418258 CLEC4GQ6UXB4 293 aa12□□□□□ -0.49
PTCH1-205ENST00000418258 PDIK1LQ8N165 341 aa12□□□□□ -0.49
PTCH1-205ENST00000418258 TPX2Q9ULW0 747 aaKnown RBP12□□□□□ -0.49
PTCH1-205ENST00000418258 F5H423 210 aaPredicted RBP12□□□□□ -0.49
PTCH1-205ENST00000418258 OSBP2Q969R2 916 aa12□□□□□ -0.49
PTCH1-205ENST00000418258 MAGEB5Q9BZ81 275 aa12□□□□□ -0.49
PTCH1-205ENST00000418258 EDEM3Q9BZQ6 932 aa12□□□□□ -0.49
PTCH1-205ENST00000418258 MID2Q9UJV3 735 aa12□□□□□ -0.49
PTCH1-205ENST00000418258 SRPRBQ9Y5M8 271 aaKnown RBP12□□□□□ -0.49
PTCH1-205ENST00000418258 HLFQ16534 295 aa12□□□□□ -0.49
PTCH1-205ENST00000418258 PGBD3Q8N328 593 aa12□□□□□ -0.49
PTCH1-205ENST00000418258 AP1M1Q9BXS5 423 aa12□□□□□ -0.49
PTCH1-205ENST00000418258 THAP9Q9H5L6 903 aa12□□□□□ -0.49
PTCH1-205ENST00000418258 AFF4Q9UHB7 1163 aaKnown RBP12□□□□□ -0.49
PTCH1-205ENST00000418258 UBE4BO95155 1302 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 EIF4A3P38919 411 aaKnown RBP11.99□□□□□ -0.49
PTCH1-205ENST00000418258 DR1Q01658 176 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 SWSAP1Q6NVH7 229 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 TMEM270Q6UE05 265 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 GIPC2Q8TF65 315 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 ARHGEF1Q92888 912 aaKnown RBP11.99□□□□□ -0.49
PTCH1-205ENST00000418258 PPP2R3CQ969Q6 453 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 TEX12Q9BXU0 123 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 TRIM15Q9C019 465 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 ASNSD1Q9NWL6 643 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 FAM196BA6NMK8 535 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 PLEKHA8P1O95397 391 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 DPCR1Q3MIW9 517 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 NSUN7Q8NE18 718 aaKnown RBP11.99□□□□□ -0.49
PTCH1-205ENST00000418258 GCOM2Q9BZD3 368 aaPredicted RBP11.99□□□□□ -0.49
PTCH1-205ENST00000418258 SUN2Q9UH99 717 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 PCDHB6Q9Y5E3 794 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 A0A1W2PQ27 194 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 A0A1W2PQ64 194 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 A0A1W2PQD8 194 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 AP3B2Q13367 1082 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 LCA5Q86VQ0 697 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 OR6J1Q8NGC5 347 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 ULK4Q96C45 1275 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 ACAP3Q96P50 834 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 KIAA1586Q9HCI6 787 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 PDE11AQ9HCR9 933 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 ANLNQ9NQW6 1124 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 SH3GLB2Q9NR46 395 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 SPTLC3Q9NUV7 552 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 ADAM22Q9P0K1 906 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 FAF1Q9UNN5 650 aaPredicted RBP11.99□□□□□ -0.49
PTCH1-205ENST00000418258 KBTBD13C9JR72 458 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 TRPA1O75762 1119 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 GRIK1P39086 918 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 ESRRGP62508 458 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 CYFIP1Q7L576 1253 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 PIP4K2CQ8TBX8 421 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 SERPINI1Q99574 410 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 YIPF2Q9BWQ6 316 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 MRPL4Q9BYD3 311 aaKnown RBP11.99□□□□□ -0.49
PTCH1-205ENST00000418258 PRPF4O43172 522 aaKnown RBP eCLIP11.99□□□□□ -0.49
PTCH1-205ENST00000418258 APBA1Q02410 837 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 POLR3CQ9BUI4 534 aaPredicted RBP11.99□□□□□ -0.49
PTCH1-205ENST00000418258 C2orf40Q9H1Z8 148 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 DNAJC17Q9NVM6 304 aaKnown RBP11.99□□□□□ -0.49
PTCH1-205ENST00000418258 INTUQ9ULD6 942 aa11.99□□□□□ -0.49
PTCH1-205ENST00000418258 USP6P35125 1406 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms