RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 NKRFO15226 690 aaKnown RBP eCLIP18.45■□□□□ 0.54
SSBP3-205ENST00000417664 HNRNPH3P31942 346 aaKnown RBP18.45■□□□□ 0.54
SSBP3-205ENST00000417664 ABCD1P33897 745 aa18.45■□□□□ 0.54
SSBP3-205ENST00000417664 XKR3Q5GH77 459 aa18.45■□□□□ 0.54
SSBP3-205ENST00000417664 SWSAP1Q6NVH7 229 aa18.45■□□□□ 0.54
SSBP3-205ENST00000417664 C2orf69Q8N8R5 385 aa18.45■□□□□ 0.54
SSBP3-205ENST00000417664 MCPH1Q8NEM0 835 aa18.45■□□□□ 0.54
SSBP3-205ENST00000417664 HVCN1Q96D96 273 aa18.45■□□□□ 0.54
SSBP3-205ENST00000417664 MMP19Q99542 508 aa18.45■□□□□ 0.54
SSBP3-205ENST00000417664 NUCKS1Q9H1E3 243 aaKnown RBP18.45■□□□□ 0.54
SSBP3-205ENST00000417664 GBA2Q9HCG7 927 aaPredicted RBP18.45■□□□□ 0.54
SSBP3-205ENST00000417664 ADGRG1Q9Y653 693 aa18.45■□□□□ 0.54
SSBP3-205ENST00000417664 IGSF9BQ9UPX0 1349 aa18.45■□□□□ 0.54
SSBP3-205ENST00000417664 ZMYM2Q9UBW7 1377 aa18.45■□□□□ 0.54
SSBP3-205ENST00000417664 K7ENM7 598 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 ZNF862O60290 1169 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 DGAT1O75907 488 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 XRCC5P13010 732 aaKnown RBP18.44■□□□□ 0.54
SSBP3-205ENST00000417664 PSMC2P35998 433 aaKnown RBP18.44■□□□□ 0.54
SSBP3-205ENST00000417664 SMTNP53814 917 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 RTP1P59025 263 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 Q3C1V9 767 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 ZC2HC1CQ53FD0 456 aaPredicted RBP18.44■□□□□ 0.54
SSBP3-205ENST00000417664 UTP14CQ5TAP6 766 aaKnown RBP18.44■□□□□ 0.54
SSBP3-205ENST00000417664 RAD9BQ6WBX8 426 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 TOGARAM2Q6ZUX3 1019 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 NEK11Q8NG66 645 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 CEP170P1Q96L14 293 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 ACCSQ96QU6 501 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 MMRN2Q9H8L6 949 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 ZNF408Q9H9D4 720 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 POLD4Q9HCU8 107 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 DMAC2Q9NW81 257 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 WDR81Q562E7 1941 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 PEX10O60683 326 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 AKAP3O75969 853 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 STBD1O95210 358 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 POTEJP0CG39 1038 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 SCP2P22307 547 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 GCLCP48506 637 aaPredicted RBP18.44■□□□□ 0.54
SSBP3-205ENST00000417664 NCKAP1LP55160 1127 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 ETF1P62495 437 aaKnown RBP18.44■□□□□ 0.54
SSBP3-205ENST00000417664 GTF2BQ00403 316 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 SP2Q02086 613 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 KCNA1Q09470 495 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 SEPT14Q6ZU15 432 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 CYFIP1Q7L576 1253 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 ANKRD23Q86SG2 305 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 CCDC60Q8IWA6 550 aaPredicted RBP18.44■□□□□ 0.54
SSBP3-205ENST00000417664 C12orf56Q8IXR9 622 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 CCDC170Q8IYT3 715 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 MYRIPQ8NFW9 859 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 MORC4Q8TE76 937 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 MS4A4AQ96JQ5 239 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 BCAS3Q9H6U6 928 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 AGPAT3Q9NRZ7 376 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 AGPAT5Q9NUQ2 364 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 PLAGL2Q9UPG8 496 aa18.44■□□□□ 0.54
SSBP3-205ENST00000417664 MAFBQ9Y5Q3 323 aaPredicted RBP18.44■□□□□ 0.54
SSBP3-205ENST00000417664 SYNGAP1Q96PV0 1343 aa18.43■□□□□ 0.54
SSBP3-205ENST00000417664 IGKV6D-21A0A0A0MT36 114 aa18.43■□□□□ 0.54
SSBP3-205ENST00000417664 AFPP02771 609 aaKnown RBP18.43■□□□□ 0.54
SSBP3-205ENST00000417664 ZBTB48P10074 688 aaPredicted RBP18.43■□□□□ 0.54
SSBP3-205ENST00000417664 NPEPPSP55786 919 aa18.43■□□□□ 0.54
SSBP3-205ENST00000417664 PRKCEQ02156 737 aa18.43■□□□□ 0.54
SSBP3-205ENST00000417664 KCNH2Q12809 1159 aa18.43■□□□□ 0.54
SSBP3-205ENST00000417664 SYCP3Q8IZU3 236 aa18.43■□□□□ 0.54
SSBP3-205ENST00000417664 GPRC5AQ8NFJ5 357 aa18.43■□□□□ 0.54
SSBP3-205ENST00000417664 SMCR8Q8TEV9 937 aaPredicted RBP18.43■□□□□ 0.54
SSBP3-205ENST00000417664 SPIRE2Q8WWL2 714 aa18.43■□□□□ 0.54
SSBP3-205ENST00000417664 NTPCRQ9BSD7 190 aaKnown RBP18.43■□□□□ 0.54
SSBP3-205ENST00000417664 FRMD4BQ9Y2L6 1034 aa18.43■□□□□ 0.54
SSBP3-205ENST00000417664 SRCAPQ6ZRS2 3230 aa18.43■□□□□ 0.54
SSBP3-205ENST00000417664 GTPBP10A4D1E9 387 aaKnown RBP18.42■□□□□ 0.54
SSBP3-205ENST00000417664 UBA1P22314 1058 aaKnown RBP18.42■□□□□ 0.54
SSBP3-205ENST00000417664 KLK7P49862 253 aa18.42■□□□□ 0.54
SSBP3-205ENST00000417664 DMP1Q13316 513 aaPredicted RBP18.42■□□□□ 0.54
SSBP3-205ENST00000417664 PLA2G4FQ68DD2 849 aa18.42■□□□□ 0.54
SSBP3-205ENST00000417664 METTL7BQ6UX53 244 aa18.42■□□□□ 0.54
SSBP3-205ENST00000417664 ZNF302Q9NR11 478 aa18.42■□□□□ 0.54
SSBP3-205ENST00000417664 PDLIM7Q9NR12 457 aa18.42■□□□□ 0.54
SSBP3-205ENST00000417664 CYP26B1Q9NR63 512 aa18.42■□□□□ 0.54
SSBP3-205ENST00000417664 FAM207AQ9NSI2 230 aaPredicted RBP18.42■□□□□ 0.54
SSBP3-205ENST00000417664 CEP72Q9P209 647 aa18.42■□□□□ 0.54
SSBP3-205ENST00000417664 EXOC7Q9UPT5 735 aa18.42■□□□□ 0.54
SSBP3-205ENST00000417664 PPME1Q9Y570 386 aa18.42■□□□□ 0.54
SSBP3-205ENST00000417664 PHLPP2Q6ZVD8 1323 aa18.41■□□□□ 0.54
SSBP3-205ENST00000417664 ASB14A6NK59 587 aa18.41■□□□□ 0.54
SSBP3-205ENST00000417664 H0YCG3 227 aa18.41■□□□□ 0.54
SSBP3-205ENST00000417664 CLIC2O15247 247 aa18.41■□□□□ 0.54
SSBP3-205ENST00000417664 FARP2O94887 1054 aaPredicted RBP18.41■□□□□ 0.54
SSBP3-205ENST00000417664 CYLC1P35663 651 aaPredicted RBP18.41■□□□□ 0.54
SSBP3-205ENST00000417664 KCNMA1Q12791 1236 aa18.41■□□□□ 0.54
SSBP3-205ENST00000417664 FSTL1Q12841 308 aa18.41■□□□□ 0.54
SSBP3-205ENST00000417664 MTF1Q14872 753 aa18.41■□□□□ 0.54
SSBP3-205ENST00000417664 PPP2R5AQ15172 486 aa18.41■□□□□ 0.54
SSBP3-205ENST00000417664 FAM102BQ5T8I3 360 aa18.41■□□□□ 0.54
SSBP3-205ENST00000417664 WDR59Q6PJI9 974 aa18.41■□□□□ 0.54
SSBP3-205ENST00000417664 MAEAQ7L5Y9 396 aa18.41■□□□□ 0.54
SSBP3-205ENST00000417664 HAUS6Q7Z4H7 955 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms