RNA–Protein interactions for RNA: ENST00000417633.1

SYNC-203, Transcript of syncoilin, intermediate filament protein, humanhuman

TSL 4

Gene SYNC, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-203ENST00000417633 GTF2IRD1Q9UHL9 959 aa12.86□□□□□ -0.35
SYNC-203ENST00000417633 HOOK1Q9UJC3 728 aaKnown RBP12.86□□□□□ -0.35
SYNC-203ENST00000417633 TRIP12Q14669 1992 aaPredicted RBP12.86□□□□□ -0.35
SYNC-203ENST00000417633 EVPLQ92817 2033 aa12.86□□□□□ -0.35
SYNC-203ENST00000417633 A0A0U1RQG5 324 aaPredicted RBP12.85□□□□□ -0.35
SYNC-203ENST00000417633 C17orf102A2RUQ5 167 aa12.85□□□□□ -0.35
SYNC-203ENST00000417633 GAS2O43903 313 aaKnown RBP12.85□□□□□ -0.35
SYNC-203ENST00000417633 C22orf31O95567 290 aa12.85□□□□□ -0.35
SYNC-203ENST00000417633 COL6A1P12109 1028 aa12.85□□□□□ -0.35
SYNC-203ENST00000417633 TBC1D8BQ0IIM8 1120 aa12.85□□□□□ -0.35
SYNC-203ENST00000417633 DPYDQ12882 1025 aa12.85□□□□□ -0.35
SYNC-203ENST00000417633 GIT2Q14161 759 aa12.85□□□□□ -0.35
SYNC-203ENST00000417633 POSTNQ15063 836 aa12.85□□□□□ -0.35
SYNC-203ENST00000417633 MTHFD1LQ6UB35 978 aa12.85□□□□□ -0.35
SYNC-203ENST00000417633 GRAMD1CQ8IYS0 662 aa12.85□□□□□ -0.35
SYNC-203ENST00000417633 MCPH1Q8NEM0 835 aa12.85□□□□□ -0.35
SYNC-203ENST00000417633 SPATA20Q8TB22 786 aa12.85□□□□□ -0.35
SYNC-203ENST00000417633 LMBR1Q8WVP7 490 aa12.85□□□□□ -0.35
SYNC-203ENST00000417633 STAMQ92783 540 aa12.85□□□□□ -0.35
SYNC-203ENST00000417633 VTI1AQ96AJ9 217 aa12.85□□□□□ -0.35
SYNC-203ENST00000417633 DNAJC19Q96DA6 116 aa12.85□□□□□ -0.35
SYNC-203ENST00000417633 NUP62CLQ9H1M0 184 aa12.85□□□□□ -0.35
SYNC-203ENST00000417633 XPNPEP1Q9NQW7 623 aa12.85□□□□□ -0.35
SYNC-203ENST00000417633 STARD7Q9NQZ5 370 aa12.85□□□□□ -0.35
SYNC-203ENST00000417633 ODF2LQ9ULJ1 636 aa12.85□□□□□ -0.35
SYNC-203ENST00000417633 PVALEFA0A1B0GWK0 134 aa12.84□□□□□ -0.35
SYNC-203ENST00000417633 FRMD3A2A2Y4 597 aa12.84□□□□□ -0.35
SYNC-203ENST00000417633 ARVCFO00192 962 aa12.84□□□□□ -0.35
SYNC-203ENST00000417633 USO1O60763 962 aaKnown RBP12.84□□□□□ -0.35
SYNC-203ENST00000417633 KLRC1P26715 233 aa12.84□□□□□ -0.35
SYNC-203ENST00000417633 SARSP49591 514 aaKnown RBP12.84□□□□□ -0.35
SYNC-203ENST00000417633 CDK7P50613 346 aa12.84□□□□□ -0.35
SYNC-203ENST00000417633 POLGP54098 1239 aaPredicted RBP12.84□□□□□ -0.35
SYNC-203ENST00000417633 CUL4BQ13620 913 aa12.84□□□□□ -0.35
SYNC-203ENST00000417633 HIC1Q14526 733 aa12.84□□□□□ -0.35
SYNC-203ENST00000417633 EMC2Q15006 297 aa12.84□□□□□ -0.35
SYNC-203ENST00000417633 CCDC183Q5T5S1 534 aa12.84□□□□□ -0.35
SYNC-203ENST00000417633 COL13A1Q5TAT6 717 aaPredicted RBP12.84□□□□□ -0.35
SYNC-203ENST00000417633 NT5DC1Q5TFE4 455 aa12.84□□□□□ -0.35
SYNC-203ENST00000417633 LINC01465Q8N7H1 131 aa12.84□□□□□ -0.35
SYNC-203ENST00000417633 TRAPPC12Q8WVT3 735 aa12.84□□□□□ -0.35
SYNC-203ENST00000417633 SLC7A3Q8WY07 619 aa12.84□□□□□ -0.35
SYNC-203ENST00000417633 SYAP1Q96A49 352 aaPredicted RBP12.84□□□□□ -0.35
SYNC-203ENST00000417633 ATP6V0A4Q9HBG4 840 aa12.84□□□□□ -0.35
SYNC-203ENST00000417633 TMEM63CQ9P1W3 806 aa12.84□□□□□ -0.35
SYNC-203ENST00000417633 PCDHA2Q9Y5H9 948 aa12.84□□□□□ -0.35
SYNC-203ENST00000417633 NPHP3-ACAD11A0A0J9YXS1 232 aa12.83□□□□□ -0.36
SYNC-203ENST00000417633 SMIM35A0A1B0GVV1 85 aa12.83□□□□□ -0.36
SYNC-203ENST00000417633 KLRC4O43908 158 aa12.83□□□□□ -0.36
SYNC-203ENST00000417633 PRR29P0C7W0 189 aa12.83□□□□□ -0.36
SYNC-203ENST00000417633 ZNF131P52739 623 aa12.83□□□□□ -0.36
SYNC-203ENST00000417633 RTP1P59025 263 aa12.83□□□□□ -0.36
SYNC-203ENST00000417633 CHMP4BP1P59074 171 aa12.83□□□□□ -0.36
SYNC-203ENST00000417633 IGBP1P78318 339 aa12.83□□□□□ -0.36
SYNC-203ENST00000417633 MAPK7Q13164 816 aa12.83□□□□□ -0.36
SYNC-203ENST00000417633 MKRN4PQ13434 485 aaPredicted RBP12.83□□□□□ -0.36
SYNC-203ENST00000417633 PNOCQ13519 176 aa12.83□□□□□ -0.36
SYNC-203ENST00000417633 CAMK4Q16566 473 aa12.83□□□□□ -0.36
SYNC-203ENST00000417633 C1orf53Q5VUE5 145 aa12.83□□□□□ -0.36
SYNC-203ENST00000417633 IER5Q5VY09 327 aa12.83□□□□□ -0.36
SYNC-203ENST00000417633 GDF6Q6KF10 455 aaPredicted RBP12.83□□□□□ -0.36
SYNC-203ENST00000417633 EFCAB12Q6NXP0 572 aa12.83□□□□□ -0.36
SYNC-203ENST00000417633 RBM43Q6ZSC3 357 aaKnown RBP12.83□□□□□ -0.36
SYNC-203ENST00000417633 UNC13DQ70J99 1090 aa12.83□□□□□ -0.36
SYNC-203ENST00000417633 DYMQ7RTS9 669 aa12.83□□□□□ -0.36
SYNC-203ENST00000417633 DAW1Q8N136 415 aa12.83□□□□□ -0.36
SYNC-203ENST00000417633 RETREG2Q8NC44 543 aa12.83□□□□□ -0.36
SYNC-203ENST00000417633 TCP11Q8WWU5 503 aa12.83□□□□□ -0.36
SYNC-203ENST00000417633 KIFAP3Q92845 792 aa12.83□□□□□ -0.36
SYNC-203ENST00000417633 REEP2Q9BRK0 252 aa12.83□□□□□ -0.36
SYNC-203ENST00000417633 SENP6Q9GZR1 1112 aaPredicted RBP12.83□□□□□ -0.36
SYNC-203ENST00000417633 BLZF1Q9H2G9 400 aa12.83□□□□□ -0.36
SYNC-203ENST00000417633 C17orf75Q9HAS0 396 aa12.83□□□□□ -0.36
SYNC-203ENST00000417633 KIAA1468Q9P260 1216 aa12.83□□□□□ -0.36
SYNC-203ENST00000417633 TUBE1Q9UJT0 475 aa12.83□□□□□ -0.36
SYNC-203ENST00000417633 PCDHA5Q9Y5H7 936 aa12.83□□□□□ -0.36
SYNC-203ENST00000417633 MYH11P35749 1972 aa12.83□□□□□ -0.36
SYNC-203ENST00000417633 ASAP2O43150 1006 aa12.82□□□□□ -0.36
SYNC-203ENST00000417633 TREHO43280 583 aa12.82□□□□□ -0.36
SYNC-203ENST00000417633 HIP1RO75146 1068 aa12.82□□□□□ -0.36
SYNC-203ENST00000417633 SMC2O95347 1197 aa12.82□□□□□ -0.36
SYNC-203ENST00000417633 KRT18P05783 430 aaKnown RBP12.82□□□□□ -0.36
SYNC-203ENST00000417633 TMOD1P28289 359 aa12.82□□□□□ -0.36
SYNC-203ENST00000417633 CASP1P29466 404 aa12.82□□□□□ -0.36
SYNC-203ENST00000417633 ARL2P36404 184 aa12.82□□□□□ -0.36
SYNC-203ENST00000417633 DNM2P50570 870 aa12.82□□□□□ -0.36
SYNC-203ENST00000417633 ZNF200P98182 395 aaPredicted RBP12.82□□□□□ -0.36
SYNC-203ENST00000417633 EHHADHQ08426 723 aa12.82□□□□□ -0.36
SYNC-203ENST00000417633 KCNB1Q14721 858 aa12.82□□□□□ -0.36
SYNC-203ENST00000417633 SNX17Q15036 470 aa12.82□□□□□ -0.36
SYNC-203ENST00000417633 CAVIN1Q6NZI2 390 aaKnown RBP12.82□□□□□ -0.36
SYNC-203ENST00000417633 SLC39A5Q6ZMH5 540 aa12.82□□□□□ -0.36
SYNC-203ENST00000417633 RPAINQ86UA6 219 aa12.82□□□□□ -0.36
SYNC-203ENST00000417633 CCDC65Q8IXS2 484 aa12.82□□□□□ -0.36
SYNC-203ENST00000417633 PPP1R13LQ8WUF5 828 aa12.82□□□□□ -0.36
SYNC-203ENST00000417633 DRC1Q96MC2 740 aa12.82□□□□□ -0.36
SYNC-203ENST00000417633 GSDMAQ96QA5 445 aa12.82□□□□□ -0.36
SYNC-203ENST00000417633 CTAGE1Q96RT6 745 aa12.82□□□□□ -0.36
SYNC-203ENST00000417633 KCNG1Q9UIX4 513 aa12.82□□□□□ -0.36
SYNC-203ENST00000417633 COL4A3BPQ9Y5P4 624 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms