RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 EYA4O95677 639 aa15.78■□□□□ 0.12
HDAC9-208ENST00000417496 BMP3P12645 472 aa15.78■□□□□ 0.12
HDAC9-208ENST00000417496 NR1D1P20393 614 aa15.78■□□□□ 0.12
HDAC9-208ENST00000417496 PRKCIP41743 596 aa15.78■□□□□ 0.12
HDAC9-208ENST00000417496 UAP1Q16222 522 aaPredicted RBP15.78■□□□□ 0.12
HDAC9-208ENST00000417496 KIAA1755Q5JYT7 1200 aa15.78■□□□□ 0.12
HDAC9-208ENST00000417496 TATDN1Q6P1N9 297 aa15.78■□□□□ 0.12
HDAC9-208ENST00000417496 FAM186BQ8IYM0 893 aa15.78■□□□□ 0.12
HDAC9-208ENST00000417496 ACTRT1Q8TDG2 376 aa15.78■□□□□ 0.12
HDAC9-208ENST00000417496 WHAMMQ8TF30 809 aa15.78■□□□□ 0.12
HDAC9-208ENST00000417496 HSD17B14Q9BPX1 270 aa15.78■□□□□ 0.12
HDAC9-208ENST00000417496 TRIM31Q9BZY9 425 aa15.78■□□□□ 0.12
HDAC9-208ENST00000417496 FAM107BQ9H098 131 aa15.78■□□□□ 0.12
HDAC9-208ENST00000417496 ISCUQ9H1K1 167 aa15.78■□□□□ 0.12
HDAC9-208ENST00000417496 ZMYM2Q9UBW7 1377 aa15.78■□□□□ 0.12
HDAC9-208ENST00000417496 IGLV3-22A0A075B6J6 115 aa15.78■□□□□ 0.12
HDAC9-208ENST00000417496 PGRMC1O00264 195 aaKnown RBP15.78■□□□□ 0.12
HDAC9-208ENST00000417496 TTI1O43156 1089 aa15.78■□□□□ 0.12
HDAC9-208ENST00000417496 LRRN2O75325 713 aa15.78■□□□□ 0.12
HDAC9-208ENST00000417496 FAM13AO94988 1023 aa15.78■□□□□ 0.12
HDAC9-208ENST00000417496 LSP1P33241 339 aa15.78■□□□□ 0.12
HDAC9-208ENST00000417496 C10orf76Q5T2E6 689 aa15.78■□□□□ 0.12
HDAC9-208ENST00000417496 TMEM179Q6ZVK1 233 aa15.78■□□□□ 0.12
HDAC9-208ENST00000417496 MAEAQ7L5Y9 396 aa15.78■□□□□ 0.12
HDAC9-208ENST00000417496 PALB2Q86YC2 1186 aa15.78■□□□□ 0.12
HDAC9-208ENST00000417496 MREGQ8N565 214 aa15.78■□□□□ 0.12
HDAC9-208ENST00000417496 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.78■□□□□ 0.12
HDAC9-208ENST00000417496 METTL14Q9HCE5 456 aaKnown RBP15.78■□□□□ 0.12
HDAC9-208ENST00000417496 LRRC4CQ9HCJ2 640 aa15.78■□□□□ 0.12
HDAC9-208ENST00000417496 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.78■□□□□ 0.12
HDAC9-208ENST00000417496 PRR12Q9ULL5 1215 aa15.78■□□□□ 0.12
HDAC9-208ENST00000417496 IGSF9BQ9UPX0 1349 aa15.78■□□□□ 0.12
HDAC9-208ENST00000417496 DRAP1Q14919 205 aaPredicted RBP15.77■□□□□ 0.12
HDAC9-208ENST00000417496 BMT2Q1RMZ1 405 aa15.77■□□□□ 0.12
HDAC9-208ENST00000417496 TTC31Q49AM3 519 aaPredicted RBP15.77■□□□□ 0.12
HDAC9-208ENST00000417496 CCDC174Q6PII3 467 aa15.77■□□□□ 0.12
HDAC9-208ENST00000417496 OTOP1Q7RTM1 612 aa15.77■□□□□ 0.12
HDAC9-208ENST00000417496 NT5DC3Q86UY8 548 aa15.77■□□□□ 0.12
HDAC9-208ENST00000417496 OLIG1Q8TAK6 271 aa15.77■□□□□ 0.12
HDAC9-208ENST00000417496 PPM1EQ8WY54 764 aa15.77■□□□□ 0.12
HDAC9-208ENST00000417496 PBKQ96KB5 322 aa15.77■□□□□ 0.12
HDAC9-208ENST00000417496 ATP6V1G3Q96LB4 118 aa15.77■□□□□ 0.12
HDAC9-208ENST00000417496 SEPT11Q9NVA2 429 aaKnown RBP15.77■□□□□ 0.12
HDAC9-208ENST00000417496 TAS2R14Q9NYV8 317 aa15.77■□□□□ 0.12
HDAC9-208ENST00000417496 PPP1R9AQ9ULJ8 1098 aa15.77■□□□□ 0.12
HDAC9-208ENST00000417496 NENFQ9UMX5 172 aa15.77■□□□□ 0.12
HDAC9-208ENST00000417496 LTBP1Q14766 1721 aa15.77■□□□□ 0.12
HDAC9-208ENST00000417496 BUB1BO60566 1050 aaPredicted RBP15.77■□□□□ 0.12
HDAC9-208ENST00000417496 HSPA9P38646 679 aaKnown RBP15.77■□□□□ 0.12
HDAC9-208ENST00000417496 PRPF4BQ13523 1007 aaKnown RBP15.77■□□□□ 0.12
HDAC9-208ENST00000417496 ARHGAP44Q17R89 818 aa15.77■□□□□ 0.12
HDAC9-208ENST00000417496 C1orf186Q6ZWK4 172 aa15.77■□□□□ 0.12
HDAC9-208ENST00000417496 TADA2BQ86TJ2 420 aa15.77■□□□□ 0.12
HDAC9-208ENST00000417496 EFCAB13Q8IY85 973 aa15.77■□□□□ 0.12
HDAC9-208ENST00000417496 SLC35G2Q8TBE7 412 aa15.77■□□□□ 0.12
HDAC9-208ENST00000417496 DPH5Q9H2P9 285 aa15.77■□□□□ 0.12
HDAC9-208ENST00000417496 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.77■□□□□ 0.12
HDAC9-208ENST00000417496 BCCIPQ9P287 314 aaKnown RBP eCLIP15.77■□□□□ 0.12
HDAC9-208ENST00000417496 CHORDC1Q9UHD1 332 aaPredicted RBP15.77■□□□□ 0.12
HDAC9-208ENST00000417496 DNAJC12Q9UKB3 198 aa15.77■□□□□ 0.12
HDAC9-208ENST00000417496 F8VZ95 297 aa15.76■□□□□ 0.11
HDAC9-208ENST00000417496 FOSP01100 380 aaPredicted RBP15.76■□□□□ 0.11
HDAC9-208ENST00000417496 NPR1P16066 1061 aa15.76■□□□□ 0.11
HDAC9-208ENST00000417496 CIITAP33076 1130 aa15.76■□□□□ 0.11
HDAC9-208ENST00000417496 STAT1P42224 750 aa15.76■□□□□ 0.11
HDAC9-208ENST00000417496 MEX3CQ5U5Q3 659 aaKnown RBP15.76■□□□□ 0.11
HDAC9-208ENST00000417496 LRCH2Q5VUJ6 765 aa15.76■□□□□ 0.11
HDAC9-208ENST00000417496 MSL1Q68DK7 614 aa15.76■□□□□ 0.11
HDAC9-208ENST00000417496 KDM7AQ6ZMT4 941 aa15.76■□□□□ 0.11
HDAC9-208ENST00000417496 TRMT1LQ7Z2T5 733 aaKnown RBP15.76■□□□□ 0.11
HDAC9-208ENST00000417496 VPS36Q86VN1 386 aa15.76■□□□□ 0.11
HDAC9-208ENST00000417496 BANK1Q8NDB2 785 aa15.76■□□□□ 0.11
HDAC9-208ENST00000417496 POLR3CQ9BUI4 534 aaPredicted RBP15.76■□□□□ 0.11
HDAC9-208ENST00000417496 STXBP5LQ9Y2K9 1186 aa15.76■□□□□ 0.11
HDAC9-208ENST00000417496 FGGP02679 453 aa15.76■□□□□ 0.11
HDAC9-208ENST00000417496 CTNNA1P35221 906 aaKnown RBP15.76■□□□□ 0.11
HDAC9-208ENST00000417496 PSMC2P35998 433 aaKnown RBP15.76■□□□□ 0.11
HDAC9-208ENST00000417496 ITGB3BPQ13352 177 aaPredicted RBP15.76■□□□□ 0.11
HDAC9-208ENST00000417496 IFI16Q16666 785 aaKnown RBP15.76■□□□□ 0.11
HDAC9-208ENST00000417496 SLFN11Q7Z7L1 901 aa15.76■□□□□ 0.11
HDAC9-208ENST00000417496 ACER1Q8TDN7 264 aa15.76■□□□□ 0.11
HDAC9-208ENST00000417496 UBLCP1Q8WVY7 318 aaPredicted RBP15.76■□□□□ 0.11
HDAC9-208ENST00000417496 GMCL1Q96IK5 515 aa15.76■□□□□ 0.11
HDAC9-208ENST00000417496 IDI2Q9BXS1 227 aa15.76■□□□□ 0.11
HDAC9-208ENST00000417496 OLFML3Q9NRN5 406 aa15.76■□□□□ 0.11
HDAC9-208ENST00000417496 FBXL5Q9UKA1 691 aa15.76■□□□□ 0.11
HDAC9-208ENST00000417496 TISP43B9A030 160 aa15.75■□□□□ 0.11
HDAC9-208ENST00000417496 SLC16A3O15427 465 aaKnown RBP15.75■□□□□ 0.11
HDAC9-208ENST00000417496 SOX5P35711 763 aa15.75■□□□□ 0.11
HDAC9-208ENST00000417496 FMO5P49326 533 aa15.75■□□□□ 0.11
HDAC9-208ENST00000417496 ZNF211Q13398 564 aaPredicted RBP15.75■□□□□ 0.11
HDAC9-208ENST00000417496 ZYXQ15942 572 aaKnown RBP15.75■□□□□ 0.11
HDAC9-208ENST00000417496 DACT2Q5SW24 774 aa15.75■□□□□ 0.11
HDAC9-208ENST00000417496 PODNQ7Z5L7 613 aa15.75■□□□□ 0.11
HDAC9-208ENST00000417496 GMCL1P1Q8NEA9 526 aa15.75■□□□□ 0.11
HDAC9-208ENST00000417496 SLC30A5Q8TAD4 765 aa15.75■□□□□ 0.11
HDAC9-208ENST00000417496 ARHGEF26Q96DR7 871 aa15.75■□□□□ 0.11
HDAC9-208ENST00000417496 FIZ1Q96SL8 496 aa15.75■□□□□ 0.11
HDAC9-208ENST00000417496 TRIM51Q9BSJ1 452 aa15.75■□□□□ 0.11
HDAC9-208ENST00000417496 GPR88Q9GZN0 384 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms