RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 GATA6Q92908 595 aa6.92□□□□□ -1.3
CCNT1-202ENST00000417344 ZNF653Q96CK0 615 aa6.92□□□□□ -1.3
CCNT1-202ENST00000417344 CORO1BQ9BR76 489 aa6.92□□□□□ -1.3
CCNT1-202ENST00000417344 STOML1Q9UBI4 398 aa6.92□□□□□ -1.3
CCNT1-202ENST00000417344 SOS2Q07890 1332 aaPredicted RBP6.92□□□□□ -1.3
CCNT1-202ENST00000417344 PCDH11XQ9BZA7 1347 aa6.92□□□□□ -1.3
CCNT1-202ENST00000417344 MYO5AQ9Y4I1 1855 aaKnown RBP6.91□□□□□ -1.3
CCNT1-202ENST00000417344 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.91□□□□□ -1.3
CCNT1-202ENST00000417344 UBE2Q2LH0YL09 131 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 RNF113AO15541 343 aaKnown RBP6.91□□□□□ -1.3
CCNT1-202ENST00000417344 PRPF3O43395 683 aaKnown RBP6.91□□□□□ -1.3
CCNT1-202ENST00000417344 FTCDO95954 541 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 AFPP02771 609 aaKnown RBP6.91□□□□□ -1.3
CCNT1-202ENST00000417344 RASA1P20936 1047 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 SOX11P35716 441 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 PHEXP78562 749 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 RNASELQ05823 741 aaKnown RBP6.91□□□□□ -1.3
CCNT1-202ENST00000417344 SULT2A1Q06520 285 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 SSRP1Q08945 709 aaKnown RBP6.91□□□□□ -1.3
CCNT1-202ENST00000417344 IRF5Q13568 498 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 BTG3Q14201 252 aaPredicted RBP6.91□□□□□ -1.3
CCNT1-202ENST00000417344 KBTBD12Q3ZCT8 623 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 WASHC2DQ5SRD0 308 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 MEI1Q5TIA1 1274 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 APOA5Q6Q788 366 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 NCCRP1Q6ZVX7 275 aaPredicted RBP6.91□□□□□ -1.3
CCNT1-202ENST00000417344 ZC3H18Q86VM9 953 aaKnown RBP6.91□□□□□ -1.3
CCNT1-202ENST00000417344 AGGF1Q8N302 714 aaeCLIP6.91□□□□□ -1.3
CCNT1-202ENST00000417344 STAG2Q8N3U4 1231 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 CFAP61Q8NHU2 1237 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 LENG1Q96BZ8 264 aaPredicted RBP6.91□□□□□ -1.3
CCNT1-202ENST00000417344 NUDT16Q96DE0 195 aaKnown RBP6.91□□□□□ -1.3
CCNT1-202ENST00000417344 TUBGCP2Q9BSJ2 902 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 CCDC28BQ9BUN5 200 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 SLC26A6Q9BXS9 759 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 MIS12Q9H081 205 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 LRMDAQ9H2I8 198 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 COPRSQ9NQ92 184 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 FGFR1OP2Q9NVK5 253 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 INTUQ9ULD6 942 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 CHMP2BQ9UQN3 213 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 GDAQ9Y2T3 454 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 TMEM98Q9Y2Y6 226 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 ZNF330Q9Y3S2 320 aaPredicted RBP6.91□□□□□ -1.3
CCNT1-202ENST00000417344 IGSF1Q8N6C5 1336 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 C3P01024 1663 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 MYO5BQ9ULV0 1848 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 hCG_2014768A0A024R1R8 64 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 CCDC169A6NNP5 214 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 TCP11X1B4DZS4 312 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 CES2O00748 559 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 RGS16O15492 202 aaPredicted RBP6.91□□□□□ -1.3
CCNT1-202ENST00000417344 DAPK3O43293 454 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 ZBTB43O43298 467 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 ATP5HO75947 161 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 AGTP01019 485 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 FGAP02671 866 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 ASLP04424 464 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 CYP1A1P04798 512 aaPredicted RBP6.91□□□□□ -1.3
CCNT1-202ENST00000417344 RPN1P04843 607 aaKnown RBP6.91□□□□□ -1.3
CCNT1-202ENST00000417344 HNRNPCP07910 306 aaKnown RBP eCLIP6.91□□□□□ -1.39e-7■■□□□ 12.6
CCNT1-202ENST00000417344 NUDT17P0C025 328 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 SPATA31D3P0C874 917 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 ZFXP17010 805 aaPredicted RBP6.91□□□□□ -1.3
CCNT1-202ENST00000417344 PMS1P54277 932 aaKnown RBP6.91□□□□□ -1.3
CCNT1-202ENST00000417344 OCRLQ01968 901 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 PTK2Q05397 1052 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 NR5A1Q13285 461 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 MAP7Q14244 749 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 KPNB1Q14974 876 aaKnown RBP6.91□□□□□ -1.3
CCNT1-202ENST00000417344 CNGA2Q16280 664 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 P3H1Q32P28 736 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 ZC2HC1CQ53FD0 456 aaPredicted RBP6.91□□□□□ -1.3
CCNT1-202ENST00000417344 PTCRAQ6ISU1 281 aaPredicted RBP6.91□□□□□ -1.3
CCNT1-202ENST00000417344 SPATA31D4Q6ZUB0 917 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 ADSSL1Q8N142 457 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 TMTC2Q8N394 836 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 LRRC8CQ8TDW0 803 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 SCFD2Q8WU76 684 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 CLMNQ96JQ2 1002 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 TRIM47Q96LD4 638 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 RMDN2Q96LZ7 410 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 TMEM237Q96Q45 408 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 CENPKQ9BS16 269 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 MTA3Q9BTC8 594 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 BRD8Q9H0E9 1235 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 DPH5Q9H2P9 285 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 DCLRE1BQ9H816 532 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 CABP5Q9NP86 173 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 ETNK2Q9NVF9 386 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 TMOD4Q9NZQ9 345 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 LARSQ9P2J5 1176 aaKnown RBP6.91□□□□□ -1.3
CCNT1-202ENST00000417344 PRKAG3Q9UGI9 489 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 KCNJ14Q9UNX9 436 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 ATP8A1Q9Y2Q0 1164 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 SH3GLB1Q9Y371 365 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 PEAK1Q9H792 1746 aa6.91□□□□□ -1.3
CCNT1-202ENST00000417344 TMEM94Q12767 1356 aa6.9□□□□□ -1.3
CCNT1-202ENST00000417344 GOLGA8AA7E2F4 631 aa6.9□□□□□ -1.3
CCNT1-202ENST00000417344 ZBBXA8MT70 800 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms