RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 EIF5BO60841 1220 aaKnown RBP19.83■□□□□ 0.77
PDLIM2-208ENST00000416159 PRKCEQ02156 737 aa19.83■□□□□ 0.77
PDLIM2-208ENST00000416159 KIZQ2M2Z5 673 aa19.83■□□□□ 0.77
PDLIM2-208ENST00000416159 LEXMQ3ZCV2 418 aa19.83■□□□□ 0.77
PDLIM2-208ENST00000416159 NAALADL2Q58DX5 795 aa19.83■□□□□ 0.77
PDLIM2-208ENST00000416159 TCEAL5Q5H9L2 206 aa19.83■□□□□ 0.77
PDLIM2-208ENST00000416159 LINC01465Q8N7H1 131 aa19.83■□□□□ 0.77
PDLIM2-208ENST00000416159 PPP1R16BQ96T49 567 aa19.83■□□□□ 0.77
PDLIM2-208ENST00000416159 OSMRQ99650 979 aa19.83■□□□□ 0.77
PDLIM2-208ENST00000416159 ADAM2Q99965 735 aa19.83■□□□□ 0.77
PDLIM2-208ENST00000416159 PHF20Q9BVI0 1012 aa19.83■□□□□ 0.77
PDLIM2-208ENST00000416159 KCNJ14Q9UNX9 436 aa19.83■□□□□ 0.77
PDLIM2-208ENST00000416159 MRPL42Q9Y6G3 142 aaKnown RBP19.83■□□□□ 0.77
PDLIM2-208ENST00000416159 CCDC194A0A1B0GVG4 234 aa19.82■□□□□ 0.76
PDLIM2-208ENST00000416159 GRM6O15303 877 aa19.82■□□□□ 0.76
PDLIM2-208ENST00000416159 NCK2O43639 380 aa19.82■□□□□ 0.76
PDLIM2-208ENST00000416159 MGEA5O60502 916 aa19.82■□□□□ 0.76
PDLIM2-208ENST00000416159 KCNA5P22460 613 aa19.82■□□□□ 0.76
PDLIM2-208ENST00000416159 CLCN3P51790 818 aa19.82■□□□□ 0.76
PDLIM2-208ENST00000416159 INF2Q27J81 1249 aa19.82■□□□□ 0.76
PDLIM2-208ENST00000416159 SLC24A5Q71RS6 500 aa19.82■□□□□ 0.76
PDLIM2-208ENST00000416159 FAM228AQ86W67 206 aa19.82■□□□□ 0.76
PDLIM2-208ENST00000416159 P2RX5Q93086 422 aa19.82■□□□□ 0.76
PDLIM2-208ENST00000416159 GJA10Q969M2 543 aa19.82■□□□□ 0.76
PDLIM2-208ENST00000416159 DDX25Q9UHL0 483 aaKnown RBP19.82■□□□□ 0.76
PDLIM2-208ENST00000416159 AKT3Q9Y243 479 aa19.82■□□□□ 0.76
PDLIM2-208ENST00000416159 C9IYK1 514 aa19.81■□□□□ 0.76
PDLIM2-208ENST00000416159 NLRP11P59045 1033 aaKnown RBP19.81■□□□□ 0.76
PDLIM2-208ENST00000416159 UGCGQ16739 394 aa19.81■□□□□ 0.76
PDLIM2-208ENST00000416159 PAN2Q504Q3 1202 aaKnown RBP19.81■□□□□ 0.76
PDLIM2-208ENST00000416159 XKR3Q5GH77 459 aa19.81■□□□□ 0.76
PDLIM2-208ENST00000416159 B3GNT9Q6UX72 402 aa19.81■□□□□ 0.76
PDLIM2-208ENST00000416159 ETNPPLQ8TBG4 499 aa19.81■□□□□ 0.76
PDLIM2-208ENST00000416159 WASF1Q92558 559 aa19.81■□□□□ 0.76
PDLIM2-208ENST00000416159 PABPC5Q96DU9 382 aaKnown RBP19.81■□□□□ 0.76
PDLIM2-208ENST00000416159 REV3LO60673 3130 aa19.81■□□□□ 0.76
PDLIM2-208ENST00000416159 SPTBN5Q9NRC6 3674 aaKnown RBP19.81■□□□□ 0.76
PDLIM2-208ENST00000416159 MMP1P03956 469 aa19.8■□□□□ 0.76
PDLIM2-208ENST00000416159 AK2P54819 239 aa19.8■□□□□ 0.76
PDLIM2-208ENST00000416159 FAM189BP81408 668 aa19.8■□□□□ 0.76
PDLIM2-208ENST00000416159 TBC1D8BQ0IIM8 1120 aa19.8■□□□□ 0.76
PDLIM2-208ENST00000416159 TARBP2Q15633 366 aaKnown RBP19.8■□□□□ 0.76
PDLIM2-208ENST00000416159 LETM2Q2VYF4 491 aa19.8■□□□□ 0.76
PDLIM2-208ENST00000416159 PUS10Q3MIT2 529 aaKnown RBP19.8■□□□□ 0.76
PDLIM2-208ENST00000416159 NEK8Q86SG6 692 aa19.8■□□□□ 0.76
PDLIM2-208ENST00000416159 LRRC71Q8N4P6 559 aa19.8■□□□□ 0.76
PDLIM2-208ENST00000416159 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.8■□□□□ 0.76
PDLIM2-208ENST00000416159 NEK9Q8TD19 979 aa19.8■□□□□ 0.76
PDLIM2-208ENST00000416159 NIFKQ9BYG3 293 aaKnown RBP19.8■□□□□ 0.76
PDLIM2-208ENST00000416159 ADAMTS10Q9H324 1103 aa19.8■□□□□ 0.76
PDLIM2-208ENST00000416159 PLAGL2Q9UPG8 496 aa19.8■□□□□ 0.76
PDLIM2-208ENST00000416159 GCFC2P16383 781 aaKnown RBP19.79■□□□□ 0.76
PDLIM2-208ENST00000416159 IBSPP21815 317 aaPredicted RBP19.79■□□□□ 0.76
PDLIM2-208ENST00000416159 EIF4BP23588 611 aaKnown RBP19.79■□□□□ 0.76
PDLIM2-208ENST00000416159 GATMP50440 423 aa19.79■□□□□ 0.76
PDLIM2-208ENST00000416159 DSC3Q14574 896 aa19.79■□□□□ 0.76
PDLIM2-208ENST00000416159 COL19A1Q14993 1142 aa19.79■□□□□ 0.76
PDLIM2-208ENST00000416159 FAM20AQ96MK3 541 aa19.79■□□□□ 0.76
PDLIM2-208ENST00000416159 NAP1L4Q99733 375 aaKnown RBP19.79■□□□□ 0.76
PDLIM2-208ENST00000416159 ELAC1Q9H777 363 aaKnown RBP19.79■□□□□ 0.76
PDLIM2-208ENST00000416159 ATP6V0A4Q9HBG4 840 aa19.79■□□□□ 0.76
PDLIM2-208ENST00000416159 ALG13Q9NP73 1137 aaKnown RBP19.79■□□□□ 0.76
PDLIM2-208ENST00000416159 ORC3Q9UBD5 711 aaPredicted RBP19.79■□□□□ 0.76
PDLIM2-208ENST00000416159 CTDNEP1O95476 244 aa19.78■□□□□ 0.76
PDLIM2-208ENST00000416159 ZSCAN20P17040 1043 aaPredicted RBP19.78■□□□□ 0.76
PDLIM2-208ENST00000416159 CDC42EP1Q00587 391 aa19.78■□□□□ 0.76
PDLIM2-208ENST00000416159 PPP4R3AQ6IN85 833 aa19.78■□□□□ 0.76
PDLIM2-208ENST00000416159 SPPL3Q8TCT6 385 aa19.78■□□□□ 0.76
PDLIM2-208ENST00000416159 AAASQ9NRG9 546 aa19.78■□□□□ 0.76
PDLIM2-208ENST00000416159 TMEM161AQ9NX61 479 aa19.78■□□□□ 0.76
PDLIM2-208ENST00000416159 SEPT9Q9UHD8 586 aaPredicted RBP19.78■□□□□ 0.76
PDLIM2-208ENST00000416159 TBKBP1A7MCY6 615 aa19.77■□□□□ 0.76
PDLIM2-208ENST00000416159 SLC37A4O43826 429 aa19.77■□□□□ 0.76
PDLIM2-208ENST00000416159 STBD1O95210 358 aa19.77■□□□□ 0.76
PDLIM2-208ENST00000416159 ITGB1P05556 798 aa19.77■□□□□ 0.76
PDLIM2-208ENST00000416159 GPC3P51654 580 aa19.77■□□□□ 0.76
PDLIM2-208ENST00000416159 PSMC5P62195 406 aa19.77■□□□□ 0.76
PDLIM2-208ENST00000416159 MTERF2Q49AM1 385 aa19.77■□□□□ 0.76
PDLIM2-208ENST00000416159 PTCRAQ6ISU1 281 aaPredicted RBP19.77■□□□□ 0.76
PDLIM2-208ENST00000416159 EP400NLQ6ZTU2 488 aa19.77■□□□□ 0.76
PDLIM2-208ENST00000416159 KLHL23Q8NBE8 558 aa19.77■□□□□ 0.76
PDLIM2-208ENST00000416159 SCLT1Q96NL6 688 aa19.77■□□□□ 0.76
PDLIM2-208ENST00000416159 KCNMB3Q9NPA1 279 aa19.77■□□□□ 0.76
PDLIM2-208ENST00000416159 CLDND1Q9NY35 253 aa19.77■□□□□ 0.76
PDLIM2-208ENST00000416159 PCDHB12Q9Y5F1 795 aa19.77■□□□□ 0.76
PDLIM2-208ENST00000416159 FNDC1Q4ZHG4 1894 aaPredicted RBP19.76■□□□□ 0.75
PDLIM2-208ENST00000416159 GRXCR2A6NFK2 248 aa19.76■□□□□ 0.75
PDLIM2-208ENST00000416159 DDX11L8A8MPP1 907 aa19.76■□□□□ 0.75
PDLIM2-208ENST00000416159 H3BQ06 376 aaPredicted RBP19.76■□□□□ 0.75
PDLIM2-208ENST00000416159 TBX3O15119 743 aa19.76■□□□□ 0.75
PDLIM2-208ENST00000416159 DKC1O60832 514 aaKnown RBP eCLIP19.76■□□□□ 0.75
PDLIM2-208ENST00000416159 DARSP14868 501 aaKnown RBP19.76■□□□□ 0.75
PDLIM2-208ENST00000416159 DNM2P50570 870 aa19.76■□□□□ 0.75
PDLIM2-208ENST00000416159 PPP2R5CQ13362 524 aa19.76■□□□□ 0.75
PDLIM2-208ENST00000416159 SPOUT1Q5T280 376 aaKnown RBP19.76■□□□□ 0.75
PDLIM2-208ENST00000416159 FAM102BQ5T8I3 360 aa19.76■□□□□ 0.75
PDLIM2-208ENST00000416159 PIK3AP1Q6ZUJ8 805 aa19.76■□□□□ 0.75
PDLIM2-208ENST00000416159 PPP2R3CQ969Q6 453 aa19.76■□□□□ 0.75
PDLIM2-208ENST00000416159 CEP89Q96ST8 783 aa19.76■□□□□ 0.75
PDLIM2-208ENST00000416159 BRMS1Q9HCU9 246 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms