RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 KCNB1Q14721 858 aa17.2■□□□□ 0.34
SHMT2-202ENST00000414700 MTERF2Q49AM1 385 aa17.2■□□□□ 0.34
SHMT2-202ENST00000414700 ZNF771Q7L3S4 317 aaPredicted RBP17.2■□□□□ 0.34
SHMT2-202ENST00000414700 DAW1Q8N136 415 aa17.2■□□□□ 0.34
SHMT2-202ENST00000414700 CCDC43Q96MW1 224 aaKnown RBP17.2■□□□□ 0.34
SHMT2-202ENST00000414700 FGFBP2Q9BYJ0 223 aa17.2■□□□□ 0.34
SHMT2-202ENST00000414700 LRRC27Q9C0I9 530 aa17.2■□□□□ 0.34
SHMT2-202ENST00000414700 ZHX3Q9H4I2 956 aa17.2■□□□□ 0.34
SHMT2-202ENST00000414700 CYP26B1Q9NR63 512 aa17.2■□□□□ 0.34
SHMT2-202ENST00000414700 PANK4Q9NVE7 773 aa17.2■□□□□ 0.34
SHMT2-202ENST00000414700 TBC1D7Q9P0N9 293 aa17.2■□□□□ 0.34
SHMT2-202ENST00000414700 NRBP1Q9UHY1 535 aa17.2■□□□□ 0.34
SHMT2-202ENST00000414700 MYADML2A6NDP7 307 aa17.2■□□□□ 0.34
SHMT2-202ENST00000414700 A6NJR5 290 aa17.2■□□□□ 0.34
SHMT2-202ENST00000414700 SEPT4O43236 478 aa17.2■□□□□ 0.34
SHMT2-202ENST00000414700 DKC1O60832 514 aaKnown RBP eCLIP17.2■□□□□ 0.34
SHMT2-202ENST00000414700 HOXD8P13378 290 aaPredicted RBP17.2■□□□□ 0.34
SHMT2-202ENST00000414700 MAP3K21Q5TCX8 1036 aa17.2■□□□□ 0.34
SHMT2-202ENST00000414700 OTUD6AQ7L8S5 288 aa17.2■□□□□ 0.34
SHMT2-202ENST00000414700 PLPPR4Q7Z2D5 763 aa17.2■□□□□ 0.34
SHMT2-202ENST00000414700 TRMT44Q8IYL2 757 aaKnown RBP17.2■□□□□ 0.34
SHMT2-202ENST00000414700 TRIML1Q8N9V2 468 aa17.2■□□□□ 0.34
SHMT2-202ENST00000414700 PXYLP1Q8TE99 480 aa17.2■□□□□ 0.34
SHMT2-202ENST00000414700 CEP89Q96ST8 783 aa17.2■□□□□ 0.34
SHMT2-202ENST00000414700 SMARCAD1Q9H4L7 1026 aa17.2■□□□□ 0.34
SHMT2-202ENST00000414700 SLC39A2Q9NP94 309 aa17.2■□□□□ 0.34
SHMT2-202ENST00000414700 GPRC5CQ9NQ84 441 aa17.2■□□□□ 0.34
SHMT2-202ENST00000414700 EXOC1Q9NV70 894 aa17.2■□□□□ 0.34
SHMT2-202ENST00000414700 EVPLQ92817 2033 aa17.19■□□□□ 0.34
SHMT2-202ENST00000414700 PVALEFA0A1B0GWK0 134 aa17.19■□□□□ 0.34
SHMT2-202ENST00000414700 FRMD3A2A2Y4 597 aa17.19■□□□□ 0.34
SHMT2-202ENST00000414700 MAPK7Q13164 816 aa17.19■□□□□ 0.34
SHMT2-202ENST00000414700 PLCB4Q15147 1175 aa17.19■□□□□ 0.34
SHMT2-202ENST00000414700 ZNF658Q5TYW1 1059 aaPredicted RBP17.19■□□□□ 0.34
SHMT2-202ENST00000414700 KIAA0895Q8NCT3 520 aa17.19■□□□□ 0.34
SHMT2-202ENST00000414700 PPP1R13LQ8WUF5 828 aa17.19■□□□□ 0.34
SHMT2-202ENST00000414700 KCNF1Q9H3M0 494 aa17.19■□□□□ 0.34
SHMT2-202ENST00000414700 PYCARDQ9ULZ3 195 aa17.19■□□□□ 0.34
SHMT2-202ENST00000414700 GOLGA6L6A8MZA4 724 aa17.18■□□□□ 0.34
SHMT2-202ENST00000414700 ZBTB42B2RXF5 422 aa17.18■□□□□ 0.34
SHMT2-202ENST00000414700 DUSP11O75319 330 aaKnown RBP17.18■□□□□ 0.34
SHMT2-202ENST00000414700 PGK1P00558 417 aa17.18■□□□□ 0.34
SHMT2-202ENST00000414700 ZNF165P49910 485 aa17.18■□□□□ 0.34
SHMT2-202ENST00000414700 PDE4CQ08493 712 aa17.18■□□□□ 0.34
SHMT2-202ENST00000414700 DGKDQ16760 1214 aa17.18■□□□□ 0.34
SHMT2-202ENST00000414700 RMND1Q9NWS8 449 aa17.18■□□□□ 0.34
SHMT2-202ENST00000414700 KAT6AQ92794 2004 aa17.18■□□□□ 0.34
SHMT2-202ENST00000414700 SYNRGQ9UMZ2 1314 aa17.18■□□□□ 0.34
SHMT2-202ENST00000414700 H3BRB1 525 aa17.18■□□□□ 0.34
SHMT2-202ENST00000414700 HIP1RO75146 1068 aa17.18■□□□□ 0.34
SHMT2-202ENST00000414700 INHAP05111 366 aa17.18■□□□□ 0.34
SHMT2-202ENST00000414700 GUCY2CP25092 1073 aa17.18■□□□□ 0.34
SHMT2-202ENST00000414700 GRK4P32298 578 aa17.18■□□□□ 0.34
SHMT2-202ENST00000414700 ARHGEF6Q15052 776 aa17.18■□□□□ 0.34
SHMT2-202ENST00000414700 HERC4Q5GLZ8 1057 aaPredicted RBP17.18■□□□□ 0.34
SHMT2-202ENST00000414700 LUZP1Q86V48 1076 aa17.18■□□□□ 0.34
SHMT2-202ENST00000414700 SFR1Q86XK3 245 aa17.18■□□□□ 0.34
SHMT2-202ENST00000414700 SH3TC2Q8TF17 1288 aa17.18■□□□□ 0.34
SHMT2-202ENST00000414700 ATP8B4Q8TF62 1192 aa17.18■□□□□ 0.34
SHMT2-202ENST00000414700 TRAPPC12Q8WVT3 735 aa17.18■□□□□ 0.34
SHMT2-202ENST00000414700 ZBTB10Q96DT7 871 aa17.18■□□□□ 0.34
SHMT2-202ENST00000414700 NIFKQ9BYG3 293 aaKnown RBP17.18■□□□□ 0.34
SHMT2-202ENST00000414700 TUT1Q9H6E5 874 aaKnown RBP17.18■□□□□ 0.34
SHMT2-202ENST00000414700 CBX8Q9HC52 389 aa17.18■□□□□ 0.34
SHMT2-202ENST00000414700 XPNPEP1Q9NQW7 623 aa17.18■□□□□ 0.34
SHMT2-202ENST00000414700 TMEM51Q9NW97 253 aa17.18■□□□□ 0.34
SHMT2-202ENST00000414700 ERAP1Q9NZ08 941 aa17.18■□□□□ 0.34
SHMT2-202ENST00000414700 KCND2Q9NZV8 630 aa17.18■□□□□ 0.34
SHMT2-202ENST00000414700 PCDHA2Q9Y5H9 948 aa17.18■□□□□ 0.34
SHMT2-202ENST00000414700 PPP1R3GB7ZBB8 358 aa17.17■□□□□ 0.34
SHMT2-202ENST00000414700 C6orf222P0C671 652 aaPredicted RBP17.17■□□□□ 0.34
SHMT2-202ENST00000414700 PRCPP42785 496 aa17.17■□□□□ 0.34
SHMT2-202ENST00000414700 TARBP2Q15633 366 aaKnown RBP17.17■□□□□ 0.34
SHMT2-202ENST00000414700 KLHL10Q6JEL2 608 aa17.17■□□□□ 0.34
SHMT2-202ENST00000414700 CCDC65Q8IXS2 484 aa17.17■□□□□ 0.34
SHMT2-202ENST00000414700 MED15Q96RN5 788 aa17.17■□□□□ 0.34
SHMT2-202ENST00000414700 AP5M1Q9H0R1 490 aa17.17■□□□□ 0.34
SHMT2-202ENST00000414700 PDLIM7Q9NR12 457 aa17.17■□□□□ 0.34
SHMT2-202ENST00000414700 TRPC6Q9Y210 931 aa17.17■□□□□ 0.34
SHMT2-202ENST00000414700 Q9Y3F1 56 aa17.17■□□□□ 0.34
SHMT2-202ENST00000414700 CASP5P51878 434 aa17.16■□□□□ 0.34
SHMT2-202ENST00000414700 NCBP1Q09161 790 aaKnown RBP17.16■□□□□ 0.34
SHMT2-202ENST00000414700 LRRC41Q15345 812 aa17.16■□□□□ 0.34
SHMT2-202ENST00000414700 FSCN1Q16658 493 aaKnown RBP17.16■□□□□ 0.34
SHMT2-202ENST00000414700 SLAIN1Q8ND83 568 aa17.16■□□□□ 0.34
SHMT2-202ENST00000414700 KAT2BQ92831 832 aa17.16■□□□□ 0.34
SHMT2-202ENST00000414700 NRBP2Q9NSY0 501 aa17.16■□□□□ 0.34
SHMT2-202ENST00000414700 TBCAO75347 108 aaKnown RBP17.16■□□□□ 0.34
SHMT2-202ENST00000414700 RARBP10826 455 aa17.16■□□□□ 0.34
SHMT2-202ENST00000414700 SLC26A2P50443 739 aa17.16■□□□□ 0.34
SHMT2-202ENST00000414700 CHMP4BP1P59074 171 aa17.16■□□□□ 0.34
SHMT2-202ENST00000414700 FAM26FQ5R3K3 315 aa17.16■□□□□ 0.34
SHMT2-202ENST00000414700 MLKLQ8NB16 471 aa17.16■□□□□ 0.34
SHMT2-202ENST00000414700 FAM200AQ8TCP9 573 aa17.16■□□□□ 0.34
SHMT2-202ENST00000414700 PTPN22Q9Y2R2 807 aa17.16■□□□□ 0.34
SHMT2-202ENST00000414700 TRIP12Q14669 1992 aaPredicted RBP17.15■□□□□ 0.34
SHMT2-202ENST00000414700 DGAT1O75907 488 aa17.15■□□□□ 0.34
SHMT2-202ENST00000414700 FAM13AO94988 1023 aa17.15■□□□□ 0.34
SHMT2-202ENST00000414700 CPT1AP50416 773 aa17.15■□□□□ 0.34
SHMT2-202ENST00000414700 ZNF131P52739 623 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms