RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 ANKS3Q6ZW76 656 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 RAPH1Q70E73 1250 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 NLRP14Q86W24 1093 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 MYLK4Q86YV6 388 aaPredicted RBP4.08□□□□□ -1.76
SF3B1-203ENST00000414174 CARNMT1Q8N4J0 409 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 TAB3Q8N5C8 712 aaPredicted RBP4.08□□□□□ -1.76
SF3B1-203ENST00000414174 MSANTD4Q8NCY6 345 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 RASGRP4Q8TDF6 673 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 TEKT4Q8WW24 435 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 DPF3Q92784 378 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 KCNN1Q92952 543 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 LRRC45Q96CN5 670 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 GPRASP2Q96D09 838 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 KIRREL1Q96J84 757 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 CLMNQ96JQ2 1002 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 PLEKHG4BQ96PX9 1271 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 DNAJC7Q99615 494 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 TRIM55Q9BYV6 548 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 RHOBTB2Q9BYZ6 727 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 SRCIN1Q9C0H9 1055 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 TAOK3Q9H2K8 898 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 CBX8Q9HC52 389 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 CHMP5Q9NZZ3 219 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 LAMP5Q9UJQ1 280 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 DUSP12Q9UNI6 340 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 CNTNAP4Q9C0A0 1308 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 ZBED4O75132 1171 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 STAMBPO95630 424 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 SLC4A1P02730 911 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 SSBP05455 408 aaKnown RBP eCLIP4.07□□□□□ -1.76
SF3B1-203ENST00000414174 HSPA1AP0DMV8 641 aaKnown RBP4.07□□□□□ -1.76
SF3B1-203ENST00000414174 HSPA1BP0DMV9 641 aaKnown RBP4.07□□□□□ -1.76
SF3B1-203ENST00000414174 MUTP22033 750 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 GARTP22102 1010 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 GLDCP23378 1020 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 KRT20P35900 424 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 MTHFRP42898 656 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 AP2B1P63010 937 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 NUCB2P80303 420 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 AKAP17AQ02040 695 aaKnown RBP4.07□□□□□ -1.76
SF3B1-203ENST00000414174 SP140Q13342 867 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 LAPTM5Q13571 262 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 COG2Q14746 738 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 ANKRD1Q15327 319 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 CLPPQ16740 277 aaPredicted RBP4.07□□□□□ -1.76
SF3B1-203ENST00000414174 SETMARQ53H47 684 aaPredicted RBP4.07□□□□□ -1.76
SF3B1-203ENST00000414174 CAVIN4Q5BKX8 364 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 SFMBT2Q5VUG0 894 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 NUGGCQ68CJ6 796 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 LLGL2Q6P1M3 1020 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 LRFN4Q6PJG9 635 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 ATG14Q6ZNE5 492 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 CCDC91Q7Z6B0 441 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 TBC1D1Q86TI0 1168 aaPredicted RBP4.07□□□□□ -1.76
SF3B1-203ENST00000414174 C12orf40Q86WS4 652 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 LRRC43Q8N309 656 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 FAM26EQ8N5C1 309 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.07□□□□□ -1.76
SF3B1-203ENST00000414174 RABGGTAQ92696 567 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 ZBTB9Q96C00 473 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 CRELD1Q96HD1 420 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 SEC16BQ96JE7 1060 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 IPO9Q96P70 1041 aaKnown RBP4.07□□□□□ -1.76
SF3B1-203ENST00000414174 EIF2AK1Q9BQI3 630 aaKnown RBP4.07□□□□□ -1.76
SF3B1-203ENST00000414174 KATNAL1Q9BW62 490 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 EMILIN2Q9BXX0 1053 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 DNAI2Q9GZS0 605 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 CCDC68Q9H2F9 335 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 KCTD10Q9H3F6 313 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 PRDM11Q9NQV5 511 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 PRDM7Q9NQW5 492 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 PPP4R2Q9NY27 417 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 POGKQ9P215 609 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 CFDP1Q9UEE9 299 aaPredicted RBP4.07□□□□□ -1.76
SF3B1-203ENST00000414174 GIMAP2Q9UG22 337 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 PCOLCE2Q9UKZ9 415 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 NOB1Q9ULX3 412 aaKnown RBP4.07□□□□□ -1.76
SF3B1-203ENST00000414174 SMG5Q9UPR3 1016 aaKnown RBP4.07□□□□□ -1.76
SF3B1-203ENST00000414174 AGTPBP1Q9UPW5 1226 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 MSRB2Q9Y3D2 182 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 TRIM17Q9Y577 477 aa4.07□□□□□ -1.76
SF3B1-203ENST00000414174 ATAD2BQ9ULI0 1458 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 SETD1BQ9UPS6 1966 aaKnown RBP4.06□□□□□ -1.76
SF3B1-203ENST00000414174 ABHD14A-ACY1A0A1B0GW23 586 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 SYNDIG1LA6NDD5 238 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 VSTM5A8MXK1 200 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 HNRNPCL2B2RXH8 293 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 H0YC42 278 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 MASP2O00187 686 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 GIPC1O14908 333 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 POLR3GO15318 223 aaPredicted RBP4.06□□□□□ -1.76
SF3B1-203ENST00000414174 P4HA2O15460 535 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 SGSM2O43147 1006 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 HOXC11O43248 304 aaPredicted RBP4.06□□□□□ -1.76
SF3B1-203ENST00000414174 HNRNPCL1O60812 293 aaKnown RBP4.06□□□□□ -1.76
SF3B1-203ENST00000414174 TBCAO75347 108 aaKnown RBP4.06□□□□□ -1.76
SF3B1-203ENST00000414174 GFPT2O94808 682 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 MBD4O95243 580 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 CYP1A2P05177 515 aa4.06□□□□□ -1.76
SF3B1-203ENST00000414174 PGRP06401 933 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 546.4 ms