RNA–Protein interactions for RNA: ENST00000413517.1

HERPUD2-203, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-203ENST00000413517 FAM49AQ9H0Q0 323 aaPredicted RBP9.66□□□□□ -0.86
HERPUD2-203ENST00000413517 MTIF3Q9H2K0 278 aaKnown RBP9.66□□□□□ -0.86
HERPUD2-203ENST00000413517 AZI2Q9H6S1 392 aa9.66□□□□□ -0.86
HERPUD2-203ENST00000413517 ZNF302Q9NR11 478 aa9.66□□□□□ -0.86
HERPUD2-203ENST00000413517 TBC1D22BQ9NU19 505 aa9.66□□□□□ -0.86
HERPUD2-203ENST00000413517 LIMCH1Q9UPQ0 1083 aa9.66□□□□□ -0.86
HERPUD2-203ENST00000413517 STXBP5LQ9Y2K9 1186 aa9.66□□□□□ -0.86
HERPUD2-203ENST00000413517 MAFBQ9Y5Q3 323 aaPredicted RBP9.66□□□□□ -0.86
HERPUD2-203ENST00000413517 UNC80Q8N2C7 3258 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 EPOPA6NHQ4 379 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 DDX11L8A8MPP1 907 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 EML1O00423 815 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 CHMP2AO43633 222 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 EIF5BO60841 1220 aaKnown RBP9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 GAS7O60861 476 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 CAND2O75155 1236 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 BAIAP3O94812 1187 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 STBD1O95210 358 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 PARNO95453 639 aaKnown RBP9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 CA3P07451 260 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 GHRP10912 638 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 ACTN1P12814 892 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 SOX11P35716 441 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 GUCY1B3Q02153 619 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 TMEM62Q0P6H9 643 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 ADGRE1Q14246 886 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 LPIN1Q14693 890 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 RAB30Q15771 203 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 LETM2Q2VYF4 491 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 LRCH2Q5VUJ6 765 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 KRT40Q6A162 431 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 ASTLQ6HA08 431 aaPredicted RBP9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 MIS18BP1Q6P0N0 1132 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 TAF2Q6P1X5 1199 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 PDXDC2PQ6P474 469 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 MTHFD1LQ6UB35 978 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 MOXD1Q6UVY6 613 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 PIK3AP1Q6ZUJ8 805 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 TRMT1LQ7Z2T5 733 aaKnown RBP9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 HAS1Q92839 578 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 UCN2Q96RP3 112 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 RIT2Q99578 217 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 PRDM12Q9H4Q4 367 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 AGO3Q9H9G7 860 aaKnown RBP9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 KCNMB3Q9NPA1 279 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 DISC1Q9NRI5 854 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 GABBR1Q9UBS5 961 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 PCDHA11Q9Y5I1 949 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 PCDHA10Q9Y5I2 948 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 CDY2AQ9Y6F7 541 aa9.65□□□□□ -0.86
HERPUD2-203ENST00000413517 TTC28Q96AY4 2481 aa9.64□□□□□ -0.87
HERPUD2-203ENST00000413517 NCOR1O75376 2440 aa9.64□□□□□ -0.87
HERPUD2-203ENST00000413517 CCDC194A0A1B0GVG4 234 aa9.64□□□□□ -0.87
HERPUD2-203ENST00000413517 ABHD14A-ACY1A0A1B0GW23 586 aa9.64□□□□□ -0.87
HERPUD2-203ENST00000413517 TMEM150BA6NC51 233 aa9.64□□□□□ -0.87
HERPUD2-203ENST00000413517 RRN3P2A6NIE6 340 aa9.64□□□□□ -0.87
HERPUD2-203ENST00000413517 BTBD18B2RXH4 712 aa9.64□□□□□ -0.87
HERPUD2-203ENST00000413517 HBP1O60381 514 aa9.64□□□□□ -0.87
HERPUD2-203ENST00000413517 C22orf31O95567 290 aa9.64□□□□□ -0.87
HERPUD2-203ENST00000413517 MMP1P03956 469 aa9.64□□□□□ -0.87
HERPUD2-203ENST00000413517 PSAPP07602 524 aa9.64□□□□□ -0.87
HERPUD2-203ENST00000413517 KLRC1P26715 233 aa9.64□□□□□ -0.87
HERPUD2-203ENST00000413517 KRT2P35908 639 aa9.64□□□□□ -0.87
HERPUD2-203ENST00000413517 SLC26A2P50443 739 aa9.64□□□□□ -0.87
HERPUD2-203ENST00000413517 MRPS6P82932 125 aaKnown RBP9.64□□□□□ -0.87
HERPUD2-203ENST00000413517 PRKCEQ02156 737 aa9.64□□□□□ -0.87
HERPUD2-203ENST00000413517 TAP1Q03518 808 aa9.64□□□□□ -0.87
HERPUD2-203ENST00000413517 FBXO47Q5MNV8 452 aa9.64□□□□□ -0.87
HERPUD2-203ENST00000413517 FAM160B1Q5W0V3 765 aa9.64□□□□□ -0.87
HERPUD2-203ENST00000413517 NEK8Q86SG6 692 aa9.64□□□□□ -0.87
HERPUD2-203ENST00000413517 SMAP1Q8IYB5 467 aaPredicted RBP9.64□□□□□ -0.87
HERPUD2-203ENST00000413517 DIS3L2Q8IYB7 885 aaKnown RBP9.64□□□□□ -0.87
HERPUD2-203ENST00000413517 LINC01465Q8N7H1 131 aa9.64□□□□□ -0.87
HERPUD2-203ENST00000413517 USP38Q8NB14 1042 aa9.64□□□□□ -0.87
HERPUD2-203ENST00000413517 PHOSPHO2Q8TCD6 241 aa9.64□□□□□ -0.87
HERPUD2-203ENST00000413517 LINC01599Q8WXQ3 324 aa9.64□□□□□ -0.87
HERPUD2-203ENST00000413517 DCBLD2Q96PD2 775 aa9.64□□□□□ -0.87
HERPUD2-203ENST00000413517 TEKT3Q9BXF9 490 aa9.64□□□□□ -0.87
HERPUD2-203ENST00000413517 TFIP11Q9UBB9 837 aaKnown RBP9.64□□□□□ -0.87
HERPUD2-203ENST00000413517 DDX25Q9UHL0 483 aaKnown RBP9.64□□□□□ -0.87
HERPUD2-203ENST00000413517 MSRAQ9UJ68 235 aa9.64□□□□□ -0.87
HERPUD2-203ENST00000413517 VAV3Q9UKW4 847 aa9.64□□□□□ -0.87
HERPUD2-203ENST00000413517 PCDHGA4Q9Y5G9 962 aa9.64□□□□□ -0.87
HERPUD2-203ENST00000413517 PCDHA2Q9Y5H9 948 aa9.64□□□□□ -0.87
HERPUD2-203ENST00000413517 COL1A2P08123 1366 aa9.63□□□□□ -0.87
HERPUD2-203ENST00000413517 WDR64B1ANS9 1081 aa9.63□□□□□ -0.87
HERPUD2-203ENST00000413517 RFXAPO00287 272 aa9.63□□□□□ -0.87
HERPUD2-203ENST00000413517 GJB5O95377 273 aa9.63□□□□□ -0.87
HERPUD2-203ENST00000413517 XBP1P17861 261 aa9.63□□□□□ -0.87
HERPUD2-203ENST00000413517 KCNJ6P48051 423 aa9.63□□□□□ -0.87
HERPUD2-203ENST00000413517 SPIRE1Q08AE8 756 aa9.63□□□□□ -0.87
HERPUD2-203ENST00000413517 IKBKEQ14164 716 aa9.63□□□□□ -0.87
HERPUD2-203ENST00000413517 PPP4R3AQ6IN85 833 aa9.63□□□□□ -0.87
HERPUD2-203ENST00000413517 FAM117BQ6P1L5 589 aa9.63□□□□□ -0.87
HERPUD2-203ENST00000413517 KIAA0319LQ8IZA0 1049 aa9.63□□□□□ -0.87
HERPUD2-203ENST00000413517 TMEM40Q8WWA1 233 aa9.63□□□□□ -0.87
HERPUD2-203ENST00000413517 WASF1Q92558 559 aa9.63□□□□□ -0.87
HERPUD2-203ENST00000413517 ZDHHC16Q969W1 377 aa9.63□□□□□ -0.87
HERPUD2-203ENST00000413517 TBC1D32Q96NH3 1257 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms