RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 RRAGDQ9NQL2 400 aaPredicted RBP9.28□□□□□ -0.92
SYNE1-211ENST00000413186 TOPORSQ9NS56 1045 aaPredicted RBP9.28□□□□□ -0.92
SYNE1-211ENST00000413186 TYW1Q9NV66 732 aaKnown RBP9.28□□□□□ -0.92
SYNE1-211ENST00000413186 DNAI1Q9UI46 699 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 CLDN3O15551 220 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 SLC37A4O43826 429 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 MYCP01106 439 aaPredicted RBP9.28□□□□□ -0.92
SYNE1-211ENST00000413186 SLURP2P0DP57 97 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 GNASQ5JWF2 1037 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 RASGRP2Q7LDG7 609 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 NT5C1BQ96P26 610 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 CRACR2AQ9BSW2 395 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 LSM14BQ9BX40 385 aaKnown RBP9.28□□□□□ -0.92
SYNE1-211ENST00000413186 EFCC1Q9HA90 598 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 FAM207AQ9NSI2 230 aaPredicted RBP9.28□□□□□ -0.92
SYNE1-211ENST00000413186 DENND3A2RUS2 1198 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 CTAGE9A4FU28 777 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 ZWINTO95229 277 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 CD19P15391 556 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 ADORA2AP29274 412 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 BPIFB4P59827 614 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 KLHL30Q0D2K2 578 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 LIN9Q5TKA1 542 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 METTL7BQ6UX53 244 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 XXYLT1Q8NBI6 393 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 FERMT1Q9BQL6 677 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 MRPL4Q9BYD3 311 aaKnown RBP9.28□□□□□ -0.92
SYNE1-211ENST00000413186 RPF1Q9H9Y2 349 aaKnown RBP9.28□□□□□ -0.92
SYNE1-211ENST00000413186 C17orf75Q9HAS0 396 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 PARP2Q9UGN5 583 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 SNCAIPQ9Y6H5 919 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 SFI1A8K8P3 1242 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 CLIC2O15247 247 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 HIP1RO75146 1068 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 MYL7Q01449 175 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 KNOP1Q1ED39 458 aaKnown RBP9.28□□□□□ -0.92
SYNE1-211ENST00000413186 SLC30A10Q6XR72 485 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 RHPN2Q8IUC4 686 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 GDAQ9Y2T3 454 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 PPME1Q9Y570 386 aa9.28□□□□□ -0.92
SYNE1-211ENST00000413186 LOC102724159A0A0B4J2E5 919 aa9.27□□□□□ -0.92
SYNE1-211ENST00000413186 TOMM70O94826 608 aa9.27□□□□□ -0.92
SYNE1-211ENST00000413186 PSMC4P43686 418 aa9.27□□□□□ -0.92
SYNE1-211ENST00000413186 NFX1Q12986 1120 aaKnown RBP9.27□□□□□ -0.92
SYNE1-211ENST00000413186 PWP2Q15269 919 aaKnown RBP9.27□□□□□ -0.92
SYNE1-211ENST00000413186 FAM110CQ1W6H9 321 aa9.27□□□□□ -0.92
SYNE1-211ENST00000413186 IER5Q5VY09 327 aa9.27□□□□□ -0.92
SYNE1-211ENST00000413186 PPP4R4Q6NUP7 873 aa9.27□□□□□ -0.92
SYNE1-211ENST00000413186 RNF168Q8IYW5 571 aaPredicted RBP9.27□□□□□ -0.92
SYNE1-211ENST00000413186 PCSK9Q8NBP7 692 aaKnown RBP9.27□□□□□ -0.92
SYNE1-211ENST00000413186 ARRDC4Q8NCT1 418 aa9.27□□□□□ -0.92
SYNE1-211ENST00000413186 GLT1D1Q96MS3 346 aa9.27□□□□□ -0.92
SYNE1-211ENST00000413186 SUPT20HL2P0C7V6 817 aa9.27□□□□□ -0.93
SYNE1-211ENST00000413186 ARP10275 920 aa9.27□□□□□ -0.93
SYNE1-211ENST00000413186 CIITAP33076 1130 aa9.27□□□□□ -0.93
SYNE1-211ENST00000413186 TOB1P50616 345 aaPredicted RBP9.27□□□□□ -0.93
SYNE1-211ENST00000413186 LBX2Q6XYB7 198 aa9.27□□□□□ -0.93
SYNE1-211ENST00000413186 HAUS6Q7Z4H7 955 aa9.27□□□□□ -0.93
SYNE1-211ENST00000413186 TAX1BP1Q86VP1 789 aa9.27□□□□□ -0.93
SYNE1-211ENST00000413186 BPIFA3Q9BQP9 254 aa9.27□□□□□ -0.93
SYNE1-211ENST00000413186 MIS12Q9H081 205 aa9.27□□□□□ -0.93
SYNE1-211ENST00000413186 AGO4Q9HCK5 861 aaKnown RBP9.27□□□□□ -0.93
SYNE1-211ENST00000413186 NUB1Q9Y5A7 615 aa9.27□□□□□ -0.93
SYNE1-211ENST00000413186 CTAGE15A4D2H0 777 aa9.27□□□□□ -0.93
SYNE1-211ENST00000413186 SLC16A4O15374 487 aa9.27□□□□□ -0.93
SYNE1-211ENST00000413186 OATP04181 439 aa9.27□□□□□ -0.93
SYNE1-211ENST00000413186 CTAGE8P0CG41 777 aa9.27□□□□□ -0.93
SYNE1-211ENST00000413186 TCF7P36402 384 aaPredicted RBP9.27□□□□□ -0.93
SYNE1-211ENST00000413186 C11orf57Q6ZUT1 292 aaPredicted RBP9.27□□□□□ -0.93
SYNE1-211ENST00000413186 CTAGE6Q86UF2 777 aa9.27□□□□□ -0.93
SYNE1-211ENST00000413186 CTAGE4Q8IX94 777 aa9.27□□□□□ -0.93
SYNE1-211ENST00000413186 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.27□□□□□ -0.93
SYNE1-211ENST00000413186 CYP39A1Q9NYL5 469 aa9.27□□□□□ -0.93
SYNE1-211ENST00000413186 NID2Q14112 1375 aa9.27□□□□□ -0.93
SYNE1-211ENST00000413186 CTNNA2P26232 953 aa9.27□□□□□ -0.93
SYNE1-211ENST00000413186 MXI1P50539 228 aa9.27□□□□□ -0.93
SYNE1-211ENST00000413186 TMEM132BQ14DG7 1078 aa9.27□□□□□ -0.93
SYNE1-211ENST00000413186 ZNF484Q5JVG2 852 aa9.27□□□□□ -0.93
SYNE1-211ENST00000413186 SARM1Q6SZW1 724 aa9.27□□□□□ -0.93
SYNE1-211ENST00000413186 ARMCX2Q7L311 632 aa9.27□□□□□ -0.93
SYNE1-211ENST00000413186 RRAGAQ7L523 313 aa9.27□□□□□ -0.93
SYNE1-211ENST00000413186 VSIG10LQ86VR7 867 aa9.27□□□□□ -0.93
SYNE1-211ENST00000413186 MYRIPQ8NFW9 859 aa9.27□□□□□ -0.93
SYNE1-211ENST00000413186 CTNNBL1Q8WYA6 563 aaPredicted RBP9.27□□□□□ -0.93
SYNE1-211ENST00000413186 APOL6Q9BWW8 343 aa9.27□□□□□ -0.93
SYNE1-211ENST00000413186 UNC45AQ9H3U1 944 aa9.27□□□□□ -0.93
SYNE1-211ENST00000413186 SUCLA2Q9P2R7 463 aaPredicted RBP9.27□□□□□ -0.93
SYNE1-211ENST00000413186 A0A0G2JLL6 359 aaPredicted RBP9.26□□□□□ -0.93
SYNE1-211ENST00000413186 TRPA1O75762 1119 aa9.26□□□□□ -0.93
SYNE1-211ENST00000413186 PIK3CAP42336 1068 aa9.26□□□□□ -0.93
SYNE1-211ENST00000413186 MFAP3P55082 362 aa9.26□□□□□ -0.93
SYNE1-211ENST00000413186 FUT2Q10981 343 aa9.26□□□□□ -0.93
SYNE1-211ENST00000413186 ARHGAP44Q17R89 818 aa9.26□□□□□ -0.93
SYNE1-211ENST00000413186 MUM1L1Q5H9M0 696 aa9.26□□□□□ -0.93
SYNE1-211ENST00000413186 IQSEC1Q6DN90 963 aa9.26□□□□□ -0.93
SYNE1-211ENST00000413186 PRRT2Q7Z6L0 340 aaPredicted RBP9.26□□□□□ -0.93
SYNE1-211ENST00000413186 GOLGA1Q92805 767 aa9.26□□□□□ -0.93
SYNE1-211ENST00000413186 HVCN1Q96D96 273 aa9.26□□□□□ -0.93
SYNE1-211ENST00000413186 SELENOOQ9BVL4 669 aa9.26□□□□□ -0.93
SYNE1-211ENST00000413186 PCIF1Q9H4Z3 704 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms