RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 CD93Q9NPY3 652 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 HDAC9Q9UKV0 1011 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 DIP2AQ14689 1571 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 FAM237AA0A1B0GTK4 181 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 MATN2O00339 956 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 ZBED1O96006 694 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 CFL1P23528 166 aaKnown RBP5.64□□□□□ -1.51
HERC4-205ENST00000412272 PRCPP42785 496 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 GALK1P51570 392 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 PLTPP55058 493 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 PFKPQ01813 784 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 ADRM1Q16186 407 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 IFNL1Q8IU54 200 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 RHOT2Q8IXI1 618 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 IPCEF1Q8WWN9 437 aaPredicted RBP5.64□□□□□ -1.51
HERC4-205ENST00000412272 ANKRD36BP1Q96IX9 119 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 SPACA7Q96KW9 195 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 MTMR9Q96QG7 549 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 CALN1Q9BXU9 219 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 FHDC1Q9C0D6 1143 aaPredicted RBP5.64□□□□□ -1.51
HERC4-205ENST00000412272 CASS4Q9NQ75 786 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 PLAAQ9Y263 795 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 USP20Q9Y2K6 914 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 SLC4A4Q9Y6R1 1079 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 NEO1Q92859 1461 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 CARNS1A5YM72 827 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 CFAP73A6NFT4 308 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 GOLGA8TH3BQL2 631 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 PRPF3O43395 683 aaKnown RBP5.64□□□□□ -1.51
HERC4-205ENST00000412272 ATP9AO75110 1047 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 WFS1O76024 890 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 MAP3K6O95382 1288 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 GOLGA8HP0CJ92 632 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 GUCY1A3Q02108 690 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 RALGDSQ12967 914 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 STILQ15468 1287 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 IFI16Q16666 785 aaKnown RBP5.64□□□□□ -1.51
HERC4-205ENST00000412272 CFAP70Q5T0N1 1121 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 CORO6Q6QEF8 472 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 CCNI2Q6ZMN8 369 aaPredicted RBP5.64□□□□□ -1.51
HERC4-205ENST00000412272 TRAPPC11Q7Z392 1133 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 RASEFQ8IZ41 740 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 CCDC63Q8NA47 563 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 CCDC148Q8NFR7 591 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 RSAD2Q8WXG1 361 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 PRCCQ92733 491 aaPredicted RBP5.64□□□□□ -1.51
HERC4-205ENST00000412272 MRPL9Q9BYD2 267 aaKnown RBP5.64□□□□□ -1.51
HERC4-205ENST00000412272 VTA1Q9NP79 307 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 TCP11L1Q9NUJ3 509 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 ADAM22Q9P0K1 906 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 USH1CQ9Y6N9 552 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 LAMA4Q16363 1823 aa5.64□□□□□ -1.51
HERC4-205ENST00000412272 CTAGE9A4FU28 777 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 HGSO14964 777 aaPredicted RBP5.63□□□□□ -1.51
HERC4-205ENST00000412272 BAIAP3O94812 1187 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 TXKP42681 527 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 CBX5P45973 191 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 GUCY2DQ02846 1103 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 IKQ13123 557 aaPredicted RBP5.63□□□□□ -1.51
HERC4-205ENST00000412272 PNMA8AQ86V59 439 aaPredicted RBP5.63□□□□□ -1.51
HERC4-205ENST00000412272 ANKMY2Q8IV38 441 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 HACE1Q8IYU2 909 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 MREGQ8N565 214 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 PAF1Q8N7H5 531 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 CCDC12Q8WUD4 166 aaPredicted RBP5.63□□□□□ -1.51
HERC4-205ENST00000412272 PTCD2Q8WV60 388 aaKnown RBP5.63□□□□□ -1.51
HERC4-205ENST00000412272 ARL8AQ96BM9 186 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 INTS12Q96CB8 462 aaKnown RBP5.63□□□□□ -1.51
HERC4-205ENST00000412272 MRRFQ96E11 262 aaKnown RBP5.63□□□□□ -1.51
HERC4-205ENST00000412272 LLPHQ9BRT6 129 aaKnown RBP5.63□□□□□ -1.51
HERC4-205ENST00000412272 HACD3Q9P035 362 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 PFDN2Q9UHV9 154 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 TSKSQ9UJT2 592 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 ZMYND8Q9ULU4 1186 aaPredicted RBP5.63□□□□□ -1.51
HERC4-205ENST00000412272 TRIM17Q9Y577 477 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 ERCC6L2Q5T890 1561 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 RGPD1P0DJD0 1748 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 GOLGA8CPA6NN73 597 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 E7ENQ6 273 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 NVLO15381 856 aaKnown RBP5.63□□□□□ -1.51
HERC4-205ENST00000412272 KLHL41O60662 606 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 GYS1P13807 737 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 TMED10P49755 219 aaKnown RBP5.63□□□□□ -1.51
HERC4-205ENST00000412272 TCIRG1Q13488 830 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 QPCTQ16769 361 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 TSHZ3Q63HK5 1081 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 INTS8Q75QN2 995 aaKnown RBP5.63□□□□□ -1.51
HERC4-205ENST00000412272 GALNT7Q86SF2 657 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 FAM186BQ8IYM0 893 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 EHBP1Q8NDI1 1231 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 CCDC51Q96ER9 411 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 AIFM2Q9BRQ8 373 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 BTBD7Q9P203 1132 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 SCOCQ9UIL1 159 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 GLRX3O76003 335 aaKnown RBP5.63□□□□□ -1.51
HERC4-205ENST00000412272 DDHD2O94830 711 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 GNRH1P01148 92 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 RPN1P04843 607 aaKnown RBP5.63□□□□□ -1.51
HERC4-205ENST00000412272 PRKACAP17612 351 aa5.63□□□□□ -1.51
HERC4-205ENST00000412272 RXRBP28702 533 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms