RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 TMEM161AQ9NX61 479 aa16.19■□□□□ 0.18
HLA-DQB2-229ENST00000411527 GOLGA8AA7E2F4 631 aa16.18■□□□□ 0.18
HLA-DQB2-229ENST00000411527 GOLGA8BA8MQT2 603 aa16.18■□□□□ 0.18
HLA-DQB2-229ENST00000411527 C22orf31O95567 290 aa16.18■□□□□ 0.18
HLA-DQB2-229ENST00000411527 VTNP04004 478 aa16.18■□□□□ 0.18
HLA-DQB2-229ENST00000411527 ATF7P17544 494 aaPredicted RBP16.18■□□□□ 0.18
HLA-DQB2-229ENST00000411527 FAM189BP81408 668 aa16.18■□□□□ 0.18
HLA-DQB2-229ENST00000411527 DUSP6Q16828 381 aa16.18■□□□□ 0.18
HLA-DQB2-229ENST00000411527 IER5LQ5T953 404 aa16.18■□□□□ 0.18
HLA-DQB2-229ENST00000411527 PDE12Q6L8Q7 609 aaKnown RBP16.18■□□□□ 0.18
HLA-DQB2-229ENST00000411527 SUGP1Q8IWZ8 645 aaKnown RBP16.18■□□□□ 0.18
HLA-DQB2-229ENST00000411527 PRSS33Q8NF86 280 aa16.18■□□□□ 0.18
HLA-DQB2-229ENST00000411527 BBXQ8WY36 941 aaPredicted RBP16.18■□□□□ 0.18
HLA-DQB2-229ENST00000411527 CDCA3Q99618 268 aaPredicted RBP16.18■□□□□ 0.18
HLA-DQB2-229ENST00000411527 CWH43Q9H720 699 aa16.18■□□□□ 0.18
HLA-DQB2-229ENST00000411527 ELAC1Q9H777 363 aaKnown RBP16.18■□□□□ 0.18
HLA-DQB2-229ENST00000411527 IGLV3-22A0A075B6J6 115 aa16.17■□□□□ 0.18
HLA-DQB2-229ENST00000411527 FSD2A1L4K1 749 aa16.17■□□□□ 0.18
HLA-DQB2-229ENST00000411527 FSCN2O14926 492 aa16.17■□□□□ 0.18
HLA-DQB2-229ENST00000411527 CYP3A4P08684 503 aa16.17■□□□□ 0.18
HLA-DQB2-229ENST00000411527 LAG3P18627 525 aa16.17■□□□□ 0.18
HLA-DQB2-229ENST00000411527 CDC27P30260 824 aa16.17■□□□□ 0.18
HLA-DQB2-229ENST00000411527 APOBRQ0VD83 1088 aa16.17■□□□□ 0.18
HLA-DQB2-229ENST00000411527 PKN1Q16512 942 aa16.17■□□□□ 0.18
HLA-DQB2-229ENST00000411527 PLPP4Q5VZY2 271 aa16.17■□□□□ 0.18
HLA-DQB2-229ENST00000411527 DHX32Q7L7V1 743 aaKnown RBP16.17■□□□□ 0.18
HLA-DQB2-229ENST00000411527 SUSD6Q92537 303 aa16.17■□□□□ 0.18
HLA-DQB2-229ENST00000411527 PHOX2BQ99453 314 aa16.17■□□□□ 0.18
HLA-DQB2-229ENST00000411527 ZNF577Q9BSK1 485 aa16.17■□□□□ 0.18
HLA-DQB2-229ENST00000411527 FAM217BQ9NTX9 383 aaPredicted RBP16.17■□□□□ 0.18
HLA-DQB2-229ENST00000411527 TBC1D22BQ9NU19 505 aa16.17■□□□□ 0.18
HLA-DQB2-229ENST00000411527 PUF60Q9UHX1 559 aaKnown RBP16.17■□□□□ 0.18
HLA-DQB2-229ENST00000411527 MAFBQ9Y5Q3 323 aaPredicted RBP16.17■□□□□ 0.18
HLA-DQB2-229ENST00000411527 KLF18A0A0U1RQI7 1052 aa16.16■□□□□ 0.18
HLA-DQB2-229ENST00000411527 GPR32O75388 356 aa16.16■□□□□ 0.18
HLA-DQB2-229ENST00000411527 SRGAP2BP0DMP2 458 aa16.16■□□□□ 0.18
HLA-DQB2-229ENST00000411527 TECP42680 631 aa16.16■□□□□ 0.18
HLA-DQB2-229ENST00000411527 PTPN5P54829 565 aa16.16■□□□□ 0.18
HLA-DQB2-229ENST00000411527 SIGLEC14Q08ET2 396 aa16.16■□□□□ 0.18
HLA-DQB2-229ENST00000411527 DSC3Q14574 896 aa16.16■□□□□ 0.18
HLA-DQB2-229ENST00000411527 FBXL6Q8N531 539 aa16.16■□□□□ 0.18
HLA-DQB2-229ENST00000411527 CRYGNQ8WXF5 182 aa16.16■□□□□ 0.18
HLA-DQB2-229ENST00000411527 MRPS27Q92552 414 aaKnown RBP16.16■□□□□ 0.18
HLA-DQB2-229ENST00000411527 TMEM117Q9H0C3 514 aa16.16■□□□□ 0.18
HLA-DQB2-229ENST00000411527 ENTPD7Q9NQZ7 604 aa16.16■□□□□ 0.18
HLA-DQB2-229ENST00000411527 TCEAL9Q9UHQ7 104 aa16.16■□□□□ 0.18
HLA-DQB2-229ENST00000411527 NAP1L2Q9ULW6 460 aaPredicted RBP16.16■□□□□ 0.18
HLA-DQB2-229ENST00000411527 LZTS1Q9Y250 596 aa16.16■□□□□ 0.18
HLA-DQB2-229ENST00000411527 WDR81Q562E7 1941 aa16.15■□□□□ 0.18
HLA-DQB2-229ENST00000411527 PSAPP07602 524 aa16.15■□□□□ 0.18
HLA-DQB2-229ENST00000411527 NLRP11P59045 1033 aaKnown RBP16.15■□□□□ 0.18
HLA-DQB2-229ENST00000411527 PLCB3Q01970 1234 aa16.15■□□□□ 0.18
HLA-DQB2-229ENST00000411527 KCNC3Q14003 757 aa16.15■□□□□ 0.18
HLA-DQB2-229ENST00000411527 PFKFB3Q16875 520 aaPredicted RBP16.15■□□□□ 0.18
HLA-DQB2-229ENST00000411527 ADCK5Q3MIX3 580 aa16.15■□□□□ 0.18
HLA-DQB2-229ENST00000411527 ZNF746Q6NUN9 644 aaPredicted RBP16.15■□□□□ 0.18
HLA-DQB2-229ENST00000411527 ANKRD54Q6NXT1 300 aa16.15■□□□□ 0.18
HLA-DQB2-229ENST00000411527 LLGL2Q6P1M3 1020 aa16.15■□□□□ 0.18
HLA-DQB2-229ENST00000411527 KCNT2Q6UVM3 1135 aa16.15■□□□□ 0.18
HLA-DQB2-229ENST00000411527 TMEM184AQ6ZMB5 413 aa16.15■□□□□ 0.18
HLA-DQB2-229ENST00000411527 LRRC55Q6ZSA7 311 aa16.15■□□□□ 0.18
HLA-DQB2-229ENST00000411527 SMAP1Q8IYB5 467 aaPredicted RBP16.15■□□□□ 0.18
HLA-DQB2-229ENST00000411527 CASD1Q96PB1 797 aa16.15■□□□□ 0.18
HLA-DQB2-229ENST00000411527 PRRX2Q99811 253 aa16.15■□□□□ 0.18
HLA-DQB2-229ENST00000411527 TCF25Q9BQ70 676 aa16.15■□□□□ 0.18
HLA-DQB2-229ENST00000411527 APOL5Q9BWW9 433 aa16.15■□□□□ 0.18
HLA-DQB2-229ENST00000411527 S1PR5Q9H228 398 aa16.15■□□□□ 0.18
HLA-DQB2-229ENST00000411527 GABBR1Q9UBS5 961 aa16.15■□□□□ 0.18
HLA-DQB2-229ENST00000411527 AKT3Q9Y243 479 aa16.15■□□□□ 0.18
HLA-DQB2-229ENST00000411527 PCDHA10Q9Y5I2 948 aa16.15■□□□□ 0.18
HLA-DQB2-229ENST00000411527 KMT2EQ8IZD2 1858 aa16.14■□□□□ 0.17
HLA-DQB2-229ENST00000411527 HIDE1A8MVS5 230 aa16.14■□□□□ 0.17
HLA-DQB2-229ENST00000411527 ADAMTS3O15072 1205 aa16.14■□□□□ 0.17
HLA-DQB2-229ENST00000411527 MAGEB2O15479 319 aa16.14■□□□□ 0.17
HLA-DQB2-229ENST00000411527 HOXA2O43364 376 aa16.14■□□□□ 0.17
HLA-DQB2-229ENST00000411527 ZSCAN20P17040 1043 aaPredicted RBP16.14■□□□□ 0.17
HLA-DQB2-229ENST00000411527 ADD1P35611 737 aaKnown RBP16.14■□□□□ 0.17
HLA-DQB2-229ENST00000411527 PBX3P40426 434 aa16.14■□□□□ 0.17
HLA-DQB2-229ENST00000411527 CLCN3P51790 818 aa16.14■□□□□ 0.17
HLA-DQB2-229ENST00000411527 SETQ01105 290 aaPredicted RBP16.14■□□□□ 0.17
HLA-DQB2-229ENST00000411527 KRT17Q04695 432 aa16.14■□□□□ 0.17
HLA-DQB2-229ENST00000411527 EFCAB12Q6NXP0 572 aa16.14■□□□□ 0.17
HLA-DQB2-229ENST00000411527 RASEFQ8IZ41 740 aa16.14■□□□□ 0.17
HLA-DQB2-229ENST00000411527 ABI1Q8IZP0 508 aa16.14■□□□□ 0.17
HLA-DQB2-229ENST00000411527 RASGRP4Q8TDF6 673 aa16.14■□□□□ 0.17
HLA-DQB2-229ENST00000411527 ZNF558Q96NG5 402 aa16.14■□□□□ 0.17
HLA-DQB2-229ENST00000411527 MAP7D2Q96T17 732 aa16.14■□□□□ 0.17
HLA-DQB2-229ENST00000411527 C6orf50Q9HD87 102 aa16.14■□□□□ 0.17
HLA-DQB2-229ENST00000411527 NGRNQ9NPE2 291 aaKnown RBP16.14■□□□□ 0.17
HLA-DQB2-229ENST00000411527 RNF19AQ9NV58 838 aa16.14■□□□□ 0.17
HLA-DQB2-229ENST00000411527 CEP131Q9UPN4 1083 aa16.14■□□□□ 0.17
HLA-DQB2-229ENST00000411527 SAMM50Q9Y512 469 aa16.14■□□□□ 0.17
HLA-DQB2-229ENST00000411527 TMOD1P28289 359 aa16.13■□□□□ 0.17
HLA-DQB2-229ENST00000411527 FGD1P98174 961 aa16.13■□□□□ 0.17
HLA-DQB2-229ENST00000411527 TSGA10IPQ3SY00 556 aa16.13■□□□□ 0.17
HLA-DQB2-229ENST00000411527 PRR16Q569H4 304 aa16.13■□□□□ 0.17
HLA-DQB2-229ENST00000411527 MCTP2Q6DN12 878 aa16.13■□□□□ 0.17
HLA-DQB2-229ENST00000411527 SYCE2Q6PIF2 218 aa16.13■□□□□ 0.17
HLA-DQB2-229ENST00000411527 TMC7Q7Z402 723 aa16.13■□□□□ 0.17
HLA-DQB2-229ENST00000411527 REXO1Q8N1G1 1221 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms