RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 CATSPERGQ6ZRH7 1159 aa8.13□□□□□ -1.11
SH3D19-203ENST00000409598 MOB2Q70IA6 237 aa8.13□□□□□ -1.11
SH3D19-203ENST00000409598 MAP7D3Q8IWC1 876 aa8.13□□□□□ -1.11
SH3D19-203ENST00000409598 GMCL1Q96IK5 515 aa8.13□□□□□ -1.11
SH3D19-203ENST00000409598 RBSNQ9H1K0 784 aa8.13□□□□□ -1.11
SH3D19-203ENST00000409598 NRBP1Q9UHY1 535 aa8.13□□□□□ -1.11
SH3D19-203ENST00000409598 DBR1Q9UK59 544 aaKnown RBP8.13□□□□□ -1.11
SH3D19-203ENST00000409598 G3BP2Q9UN86 482 aaKnown RBP8.13□□□□□ -1.11
SH3D19-203ENST00000409598 IKBKBO14920 756 aa8.13□□□□□ -1.11
SH3D19-203ENST00000409598 ZNF280AP59817 542 aaPredicted RBP8.13□□□□□ -1.11
SH3D19-203ENST00000409598 APBB2Q92870 758 aa8.13□□□□□ -1.11
SH3D19-203ENST00000409598 KIF12Q96FN5 646 aa8.13□□□□□ -1.11
SH3D19-203ENST00000409598 AGBL1Q96MI9 1066 aa8.13□□□□□ -1.11
SH3D19-203ENST00000409598 SLC7A5P2Q9GIP4 190 aa8.13□□□□□ -1.11
SH3D19-203ENST00000409598 NUCKS1Q9H1E3 243 aaKnown RBP8.13□□□□□ -1.11
SH3D19-203ENST00000409598 CACYBPQ9HB71 228 aaKnown RBP8.13□□□□□ -1.11
SH3D19-203ENST00000409598 PCDHB8Q9UN66 801 aa8.13□□□□□ -1.11
SH3D19-203ENST00000409598 STAMBPO95630 424 aa8.13□□□□□ -1.11
SH3D19-203ENST00000409598 SMARCA1P28370 1054 aa8.13□□□□□ -1.11
SH3D19-203ENST00000409598 TCF7P36402 384 aaPredicted RBP8.13□□□□□ -1.11
SH3D19-203ENST00000409598 IFNAR2P48551 515 aa8.13□□□□□ -1.11
SH3D19-203ENST00000409598 DNA2P51530 1060 aa8.13□□□□□ -1.11
SH3D19-203ENST00000409598 EPHB1P54762 984 aa8.13□□□□□ -1.11
SH3D19-203ENST00000409598 UBXN1Q04323 297 aa8.13□□□□□ -1.11
SH3D19-203ENST00000409598 KCNB1Q14721 858 aa8.13□□□□□ -1.11
SH3D19-203ENST00000409598 TTBK2Q6IQ55 1244 aa8.13□□□□□ -1.11
SH3D19-203ENST00000409598 EFCAB12Q6NXP0 572 aa8.13□□□□□ -1.11
SH3D19-203ENST00000409598 DDX53Q86TM3 631 aaKnown RBP8.13□□□□□ -1.11
SH3D19-203ENST00000409598 ACER1Q8TDN7 264 aa8.13□□□□□ -1.11
SH3D19-203ENST00000409598 MAP4K1Q92918 833 aa8.13□□□□□ -1.11
SH3D19-203ENST00000409598 FAM163AQ96GL9 167 aaPredicted RBP8.13□□□□□ -1.11
SH3D19-203ENST00000409598 RIPOR3Q96MK2 946 aa8.13□□□□□ -1.11
SH3D19-203ENST00000409598 SAGE1Q9NXZ1 904 aa8.13□□□□□ -1.11
SH3D19-203ENST00000409598 OGFRQ9NZT2 677 aa8.13□□□□□ -1.11
SH3D19-203ENST00000409598 SLC45A1Q9Y2W3 748 aa8.13□□□□□ -1.11
SH3D19-203ENST00000409598 PCDHB4Q9Y5E5 795 aa8.13□□□□□ -1.11
SH3D19-203ENST00000409598 WDR19Q8NEZ3 1342 aa8.12□□□□□ -1.11
SH3D19-203ENST00000409598 H3BRB1 525 aa8.12□□□□□ -1.11
SH3D19-203ENST00000409598 SPOPO43791 374 aa8.12□□□□□ -1.11
SH3D19-203ENST00000409598 RNASEH1O60930 286 aaKnown RBP8.12□□□□□ -1.11
SH3D19-203ENST00000409598 CA4P22748 312 aa8.12□□□□□ -1.11
SH3D19-203ENST00000409598 PPM1LQ5SGD2 360 aa8.12□□□□□ -1.11
SH3D19-203ENST00000409598 LMBRD2Q68DH5 695 aaPredicted RBP8.12□□□□□ -1.11
SH3D19-203ENST00000409598 SCYL2Q6P3W7 929 aa8.12□□□□□ -1.11
SH3D19-203ENST00000409598 CCDC149Q6ZUS6 474 aa8.12□□□□□ -1.11
SH3D19-203ENST00000409598 GPATCH11Q8N954 259 aa8.12□□□□□ -1.11
SH3D19-203ENST00000409598 CCDC42Q96M95 316 aa8.12□□□□□ -1.11
SH3D19-203ENST00000409598 TUT1Q9H6E5 874 aaKnown RBP8.12□□□□□ -1.11
SH3D19-203ENST00000409598 PRG3Q9Y2Y8 225 aaPredicted RBP8.12□□□□□ -1.11
SH3D19-203ENST00000409598 TRPV2Q9Y5S1 764 aa8.12□□□□□ -1.11
SH3D19-203ENST00000409598 PXDNLA1KZ92 1463 aa8.12□□□□□ -1.11
SH3D19-203ENST00000409598 ZMYND10O75800 440 aa8.12□□□□□ -1.11
SH3D19-203ENST00000409598 PSMC2P35998 433 aaKnown RBP8.12□□□□□ -1.11
SH3D19-203ENST00000409598 PAK1Q13153 545 aa8.12□□□□□ -1.11
SH3D19-203ENST00000409598 CRHR2Q13324 411 aa8.12□□□□□ -1.11
SH3D19-203ENST00000409598 STARD3Q14849 445 aa8.12□□□□□ -1.11
SH3D19-203ENST00000409598 PDIA6Q15084 440 aa8.12□□□□□ -1.11
SH3D19-203ENST00000409598 ASIC2Q16515 512 aa8.12□□□□□ -1.11
SH3D19-203ENST00000409598 ISM2Q6H9L7 571 aa8.12□□□□□ -1.11
SH3D19-203ENST00000409598 L3MBTL3Q96JM7 780 aaPredicted RBP8.12□□□□□ -1.11
SH3D19-203ENST00000409598 HEXIM2Q96MH2 286 aaKnown RBP8.12□□□□□ -1.11
SH3D19-203ENST00000409598 SLITRK1Q96PX8 696 aa8.12□□□□□ -1.11
SH3D19-203ENST00000409598 TSEN34Q9BSV6 310 aaKnown RBP8.12□□□□□ -1.11
SH3D19-203ENST00000409598 SLC38A10Q9HBR0 1119 aa8.12□□□□□ -1.11
SH3D19-203ENST00000409598 KIF2AO00139 706 aaPredicted RBP8.12□□□□□ -1.11
SH3D19-203ENST00000409598 BNIP3LO60238 219 aa8.12□□□□□ -1.11
SH3D19-203ENST00000409598 ZC3H11AO75152 810 aaKnown RBP eCLIP8.12□□□□□ -1.11
SH3D19-203ENST00000409598 NPM3O75607 178 aaKnown RBP8.12□□□□□ -1.11
SH3D19-203ENST00000409598 METTL7BQ6UX53 244 aa8.12□□□□□ -1.11
SH3D19-203ENST00000409598 BANK1Q8NDB2 785 aa8.12□□□□□ -1.11
SH3D19-203ENST00000409598 DDX27Q96GQ7 796 aaKnown RBP8.12□□□□□ -1.11
SH3D19-203ENST00000409598 TRPV6Q9H1D0 765 aa8.12□□□□□ -1.11
SH3D19-203ENST00000409598 AKAP7Q9P0M2 348 aaPredicted RBP8.12□□□□□ -1.11
SH3D19-203ENST00000409598 ADGRB1O14514 1584 aa8.12□□□□□ -1.11
SH3D19-203ENST00000409598 VWA5AO00534 786 aa8.12□□□□□ -1.11
SH3D19-203ENST00000409598 POLR2DO15514 142 aaKnown RBP8.12□□□□□ -1.11
SH3D19-203ENST00000409598 RASA1P20936 1047 aa8.12□□□□□ -1.11
SH3D19-203ENST00000409598 PPARGP37231 505 aaPredicted RBP8.12□□□□□ -1.11
SH3D19-203ENST00000409598 RPL10AP62906 217 aaKnown RBP8.12□□□□□ -1.11
SH3D19-203ENST00000409598 PRPSAP1Q14558 356 aa8.12□□□□□ -1.11
SH3D19-203ENST00000409598 PFKFB3Q16875 520 aaPredicted RBP8.12□□□□□ -1.11
SH3D19-203ENST00000409598 SEL1L2Q5TEA6 688 aa8.12□□□□□ -1.11
SH3D19-203ENST00000409598 GBP6Q6ZN66 633 aa8.12□□□□□ -1.11
SH3D19-203ENST00000409598 MYRIPQ8NFW9 859 aa8.12□□□□□ -1.11
SH3D19-203ENST00000409598 TBC1D31Q96DN5 1066 aa8.12□□□□□ -1.11
SH3D19-203ENST00000409598 RIT2Q99578 217 aa8.12□□□□□ -1.11
SH3D19-203ENST00000409598 BCL2L12Q9HB09 334 aa8.12□□□□□ -1.11
SH3D19-203ENST00000409598 DDTLA6NHG4 134 aaPredicted RBP8.11□□□□□ -1.11
SH3D19-203ENST00000409598 CCL23P55773 120 aa8.11□□□□□ -1.11
SH3D19-203ENST00000409598 KRT83P78385 493 aa8.11□□□□□ -1.11
SH3D19-203ENST00000409598 ZNF746Q6NUN9 644 aaPredicted RBP8.11□□□□□ -1.11
SH3D19-203ENST00000409598 CLMNQ96JQ2 1002 aa8.11□□□□□ -1.11
SH3D19-203ENST00000409598 C2CD2LO14523 706 aa8.11□□□□□ -1.11
SH3D19-203ENST00000409598 MYZAPP0CAP1 466 aa8.11□□□□□ -1.11
SH3D19-203ENST00000409598 GRIK1P39086 918 aa8.11□□□□□ -1.11
SH3D19-203ENST00000409598 PNPLA4P41247 253 aa8.11□□□□□ -1.11
SH3D19-203ENST00000409598 SV2CQ496J9 727 aa8.11□□□□□ -1.11
SH3D19-203ENST00000409598 USP38Q8NB14 1042 aa8.11□□□□□ -1.11
SH3D19-203ENST00000409598 TTC25Q96NG3 672 aa8.11□□□□□ -1.11
SH3D19-203ENST00000409598 SEPT5Q99719 369 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms