RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 NCANO14594 1321 aa5.9□□□□□ -1.46
PMS1-203ENST00000409593 GSG1L2A8MUP6 293 aa5.9□□□□□ -1.47
PMS1-203ENST00000409593 PRRG2O14669 202 aa5.9□□□□□ -1.47
PMS1-203ENST00000409593 APOL3O95236 402 aa5.9□□□□□ -1.47
PMS1-203ENST00000409593 MEOX1P50221 254 aa5.9□□□□□ -1.47
PMS1-203ENST00000409593 EPHA7Q15375 998 aa5.9□□□□□ -1.47
PMS1-203ENST00000409593 ZMAT1Q5H9K5 638 aa5.9□□□□□ -1.47
PMS1-203ENST00000409593 TMEM200BQ69YZ2 307 aa5.9□□□□□ -1.47
PMS1-203ENST00000409593 NME9Q86XW9 330 aa5.9□□□□□ -1.47
PMS1-203ENST00000409593 PASD1Q8IV76 773 aa5.9□□□□□ -1.47
PMS1-203ENST00000409593 EFHBQ8N7U6 833 aa5.9□□□□□ -1.47
PMS1-203ENST00000409593 RTF1Q92541 710 aaKnown RBP5.9□□□□□ -1.47
PMS1-203ENST00000409593 MAML3Q96JK9 1138 aa5.9□□□□□ -1.47
PMS1-203ENST00000409593 LRRC37BQ96QE4 947 aa5.9□□□□□ -1.47
PMS1-203ENST00000409593 PTPN18Q99952 460 aa5.9□□□□□ -1.47
PMS1-203ENST00000409593 PPP4R1LQ9P1A2 415 aa5.9□□□□□ -1.47
PMS1-203ENST00000409593 MAGEL2Q9UJ55 1249 aa5.9□□□□□ -1.47
PMS1-203ENST00000409593 FAM184BQ9ULE4 1060 aa5.9□□□□□ -1.47
PMS1-203ENST00000409593 A0A087X0B3 334 aa5.89□□□□□ -1.47
PMS1-203ENST00000409593 CNOT4O95628 575 aaKnown RBP5.89□□□□□ -1.47
PMS1-203ENST00000409593 ITGB3P05106 788 aa5.89□□□□□ -1.47
PMS1-203ENST00000409593 EPHB4P54760 987 aa5.89□□□□□ -1.47
PMS1-203ENST00000409593 EIF4HQ15056 248 aaKnown RBP5.89□□□□□ -1.47
PMS1-203ENST00000409593 LARP4Q71RC2 724 aaKnown RBP eCLIP5.89□□□□□ -1.47
PMS1-203ENST00000409593 FILIP1Q7Z7B0 1213 aa5.89□□□□□ -1.47
PMS1-203ENST00000409593 LOXL4Q96JB6 756 aa5.89□□□□□ -1.47
PMS1-203ENST00000409593 SCYL1Q96KG9 808 aa5.89□□□□□ -1.47
PMS1-203ENST00000409593 CLSTN1O94985 981 aa5.88□□□□□ -1.47
PMS1-203ENST00000409593 OCRLQ01968 901 aa5.88□□□□□ -1.47
PMS1-203ENST00000409593 NOLC1Q14978 699 aaKnown RBP eCLIP5.88□□□□□ -1.47
PMS1-203ENST00000409593 PCOLCEQ15113 449 aa5.88□□□□□ -1.47
PMS1-203ENST00000409593 RNF151Q2KHN1 245 aa5.88□□□□□ -1.47
PMS1-203ENST00000409593 PRRT2Q7Z6L0 340 aaPredicted RBP5.88□□□□□ -1.47
PMS1-203ENST00000409593 ZZZ3Q8IYH5 903 aa5.88□□□□□ -1.47
PMS1-203ENST00000409593 SMC1BQ8NDV3 1235 aa5.88□□□□□ -1.47
PMS1-203ENST00000409593 LMF1Q96S06 567 aa5.88□□□□□ -1.47
PMS1-203ENST00000409593 MEGF9Q9H1U4 602 aa5.88□□□□□ -1.47
PMS1-203ENST00000409593 POFUT1Q9H488 388 aa5.88□□□□□ -1.47
PMS1-203ENST00000409593 BUD31P41223 144 aaPredicted RBP5.88□□□□□ -1.47
PMS1-203ENST00000409593 MRE11P49959 708 aa5.88□□□□□ -1.47
PMS1-203ENST00000409593 ADCY1Q08828 1119 aa5.88□□□□□ -1.47
PMS1-203ENST00000409593 ZNF827Q17R98 1081 aa5.88□□□□□ -1.47
PMS1-203ENST00000409593 AGBL4Q5VU57 503 aa5.88□□□□□ -1.47
PMS1-203ENST00000409593 SLFN13Q68D06 897 aa5.88□□□□□ -1.47
PMS1-203ENST00000409593 CIR1Q86X95 450 aaPredicted RBP5.88□□□□□ -1.47
PMS1-203ENST00000409593 PHYKPLQ8IUZ5 450 aa5.88□□□□□ -1.47
PMS1-203ENST00000409593 OR5AN1Q8NGI8 311 aa5.88□□□□□ -1.47
PMS1-203ENST00000409593 RBM15Q96T37 977 aaKnown RBP eCLIP5.88□□□□□ -1.47
PMS1-203ENST00000409593 ZMAT4Q9H898 229 aa5.88□□□□□ -1.47
PMS1-203ENST00000409593 SPTLC3Q9NUV7 552 aa5.88□□□□□ -1.47
PMS1-203ENST00000409593 NR2E1Q9Y466 385 aa5.88□□□□□ -1.47
PMS1-203ENST00000409593 FKBP9O95302 570 aa5.87□□□□□ -1.47
PMS1-203ENST00000409593 CD40P25942 277 aa5.87□□□□□ -1.47
PMS1-203ENST00000409593 ADCYAP1R1P41586 468 aa5.87□□□□□ -1.47
PMS1-203ENST00000409593 RAC3P60763 192 aa5.87□□□□□ -1.47
PMS1-203ENST00000409593 MYBPC3Q14896 1274 aa5.87□□□□□ -1.47
PMS1-203ENST00000409593 TIGD7Q6NT04 549 aaPredicted RBP5.87□□□□□ -1.47
PMS1-203ENST00000409593 FKBP9P1Q75LS8 142 aa5.87□□□□□ -1.47
PMS1-203ENST00000409593 C11orf74Q86VG3 221 aa5.87□□□□□ -1.47
PMS1-203ENST00000409593 UBR7Q8N806 425 aa5.87□□□□□ -1.47
PMS1-203ENST00000409593 RPGRQ92834 1020 aaKnown RBP5.87□□□□□ -1.47
PMS1-203ENST00000409593 USP7Q93009 1102 aa5.87□□□□□ -1.47
PMS1-203ENST00000409593 GNRHR2Q96P88 292 aa5.87□□□□□ -1.47
PMS1-203ENST00000409593 MAPRE3Q9UPY8 281 aa5.87□□□□□ -1.47
PMS1-203ENST00000409593 TGM5O43548 720 aa5.86□□□□□ -1.47
PMS1-203ENST00000409593 ADCY2Q08462 1091 aa5.86□□□□□ -1.47
PMS1-203ENST00000409593 DGKDQ16760 1214 aa5.86□□□□□ -1.47
PMS1-203ENST00000409593 THNSL2Q86YJ6 484 aa5.86□□□□□ -1.47
PMS1-203ENST00000409593 GIMAP8Q8ND71 665 aaPredicted RBP5.86□□□□□ -1.47
PMS1-203ENST00000409593 CHST13Q8NET6 341 aa5.86□□□□□ -1.47
PMS1-203ENST00000409593 OR14K1Q8NGZ2 314 aa5.86□□□□□ -1.47
PMS1-203ENST00000409593 NEIL1Q96FI4 390 aaPredicted RBP5.86□□□□□ -1.47
PMS1-203ENST00000409593 DPYSL5Q9BPU6 564 aa5.86□□□□□ -1.47
PMS1-203ENST00000409593 MYL10Q9BUA6 226 aa5.86□□□□□ -1.47
PMS1-203ENST00000409593 OR10A2Q9H208 303 aa5.86□□□□□ -1.47
PMS1-203ENST00000409593 C12orf65Q9H3J6 166 aaKnown RBP5.86□□□□□ -1.47
PMS1-203ENST00000409593 SEC61A2Q9H9S3 476 aa5.86□□□□□ -1.47
PMS1-203ENST00000409593 SMPD4Q9NXE4 827 aa5.86□□□□□ -1.47
PMS1-203ENST00000409593 SAE1Q9UBE0 346 aaPredicted RBP5.86□□□□□ -1.47
PMS1-203ENST00000409593 CNOT11Q9UKZ1 510 aaKnown RBP5.86□□□□□ -1.47
PMS1-203ENST00000409593 GPR42O15529 346 aa5.85□□□□□ -1.47
PMS1-203ENST00000409593 ARHGAP6O43182 974 aa5.85□□□□□ -1.47
PMS1-203ENST00000409593 PRPF6O94906 941 aaKnown RBP5.85□□□□□ -1.47
PMS1-203ENST00000409593 LSSP48449 732 aa5.85□□□□□ -1.47
PMS1-203ENST00000409593 TBR1Q16650 682 aa5.85□□□□□ -1.47
PMS1-203ENST00000409593 TRIM68Q6AZZ1 485 aa5.85□□□□□ -1.47
PMS1-203ENST00000409593 USP30Q70CQ3 517 aa5.85□□□□□ -1.47
PMS1-203ENST00000409593 C8orf49Q96NF6 230 aa5.85□□□□□ -1.47
PMS1-203ENST00000409593 SSBP3Q9BWW4 388 aaPredicted RBP5.85□□□□□ -1.47
PMS1-203ENST00000409593 ST6GALNAC2Q9UJ37 374 aa5.85□□□□□ -1.47
PMS1-203ENST00000409593 MSRAQ9UJ68 235 aa5.85□□□□□ -1.47
PMS1-203ENST00000409593 CDC14BO60729 498 aa5.85□□□□□ -1.47
PMS1-203ENST00000409593 MAFO75444 373 aaPredicted RBP5.85□□□□□ -1.47
PMS1-203ENST00000409593 BCAR1P56945 870 aa5.85□□□□□ -1.47
PMS1-203ENST00000409593 SMAD3P84022 425 aaKnown RBP5.85□□□□□ -1.47
PMS1-203ENST00000409593 EFEMP1Q12805 493 aa5.85□□□□□ -1.47
PMS1-203ENST00000409593 STRN3Q13033 797 aa5.85□□□□□ -1.47
PMS1-203ENST00000409593 ADAM15Q13444 863 aa5.85□□□□□ -1.47
PMS1-203ENST00000409593 SPATS1Q496A3 300 aa5.85□□□□□ -1.47
PMS1-203ENST00000409593 CT47A1Q5JQC4 288 aaPredicted RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms