RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 GPRC5CQ9NQ84 441 aa18.66■□□□□ 0.58
SSB-202ENST00000409333 XPNPEP1Q9NQW7 623 aa18.66■□□□□ 0.58
SSB-202ENST00000409333 ZNF215Q9UL58 517 aaPredicted RBP18.66■□□□□ 0.58
SSB-202ENST00000409333 MAPK8IP1Q9UQF2 711 aa18.66■□□□□ 0.58
SSB-202ENST00000409333 PTPN22Q9Y2R2 807 aa18.66■□□□□ 0.58
SSB-202ENST00000409333 SIP14410 1827 aa18.66■□□□□ 0.58
SSB-202ENST00000409333 PPP1R3GB7ZBB8 358 aa18.65■□□□□ 0.58
SSB-202ENST00000409333 ZNF131P52739 623 aa18.65■□□□□ 0.58
SSB-202ENST00000409333 POLGP54098 1239 aaPredicted RBP18.65■□□□□ 0.58
SSB-202ENST00000409333 EMC2Q15006 297 aa18.65■□□□□ 0.58
SSB-202ENST00000409333 FAM26FQ5R3K3 315 aa18.65■□□□□ 0.58
SSB-202ENST00000409333 FAM200AQ8TCP9 573 aa18.65■□□□□ 0.58
SSB-202ENST00000409333 SH3TC2Q8TF17 1288 aa18.65■□□□□ 0.58
SSB-202ENST00000409333 TRAPPC12Q8WVT3 735 aa18.65■□□□□ 0.58
SSB-202ENST00000409333 DHX33Q9H6R0 707 aaKnown RBP18.65■□□□□ 0.58
SSB-202ENST00000409333 ATP6V0A4Q9HBG4 840 aa18.65■□□□□ 0.58
SSB-202ENST00000409333 CBX8Q9HC52 389 aa18.65■□□□□ 0.58
SSB-202ENST00000409333 PDLIM7Q9NR12 457 aa18.65■□□□□ 0.58
SSB-202ENST00000409333 PCDHA2Q9Y5H9 948 aa18.65■□□□□ 0.58
SSB-202ENST00000409333 FSD2A1L4K1 749 aa18.65■□□□□ 0.58
SSB-202ENST00000409333 HBP1O60381 514 aa18.65■□□□□ 0.58
SSB-202ENST00000409333 ADAMTS4O75173 837 aa18.65■□□□□ 0.58
SSB-202ENST00000409333 MYL3P08590 195 aa18.65■□□□□ 0.58
SSB-202ENST00000409333 HSPA8P11142 646 aaKnown RBP18.65■□□□□ 0.58
SSB-202ENST00000409333 PRCPP42785 496 aa18.65■□□□□ 0.58
SSB-202ENST00000409333 BRDTQ58F21 947 aaPredicted RBP18.65■□□□□ 0.58
SSB-202ENST00000409333 FAM102BQ5T8I3 360 aa18.65■□□□□ 0.58
SSB-202ENST00000409333 KAT2BQ92831 832 aa18.65■□□□□ 0.58
SSB-202ENST00000409333 PARVGQ9HBI0 331 aa18.65■□□□□ 0.58
SSB-202ENST00000409333 XPNPEP3Q9NQH7 507 aa18.65■□□□□ 0.58
SSB-202ENST00000409333 DDX20Q9UHI6 824 aaKnown RBP18.65■□□□□ 0.58
SSB-202ENST00000409333 COL4A3BPQ9Y5P4 624 aa18.65■□□□□ 0.58
SSB-202ENST00000409333 F2P00734 622 aa18.64■□□□□ 0.57
SSB-202ENST00000409333 GAP43P17677 238 aa18.64■□□□□ 0.57
SSB-202ENST00000409333 PSMD2Q13200 908 aa18.64■□□□□ 0.57
SSB-202ENST00000409333 MYCT1Q8N699 235 aa18.64■□□□□ 0.57
SSB-202ENST00000409333 TIPINQ9BVW5 301 aa18.64■□□□□ 0.57
SSB-202ENST00000409333 NAT10Q9H0A0 1025 aaKnown RBP18.64■□□□□ 0.57
SSB-202ENST00000409333 DACH1Q9UI36 760 aa18.64■□□□□ 0.57
SSB-202ENST00000409333 GOLGA6L3A6NEY3 463 aa18.63■□□□□ 0.57
SSB-202ENST00000409333 CAVIN2O95810 425 aa18.63■□□□□ 0.57
SSB-202ENST00000409333 INSRRP14616 1297 aa18.63■□□□□ 0.57
SSB-202ENST00000409333 LRRC41Q15345 812 aa18.63■□□□□ 0.57
SSB-202ENST00000409333 KLHL10Q6JEL2 608 aa18.63■□□□□ 0.57
SSB-202ENST00000409333 LUZP1Q86V48 1076 aa18.63■□□□□ 0.57
SSB-202ENST00000409333 MCPH1Q8NEM0 835 aa18.63■□□□□ 0.57
SSB-202ENST00000409333 DRC1Q96MC2 740 aa18.63■□□□□ 0.57
SSB-202ENST00000409333 MAFO75444 373 aaPredicted RBP18.63■□□□□ 0.57
SSB-202ENST00000409333 RFC5P40937 340 aa18.63■□□□□ 0.57
SSB-202ENST00000409333 CASP5P51878 434 aa18.63■□□□□ 0.57
SSB-202ENST00000409333 CHMP4BP1P59074 171 aa18.63■□□□□ 0.57
SSB-202ENST00000409333 IGBP1P78318 339 aa18.63■□□□□ 0.57
SSB-202ENST00000409333 PURAQ00577 322 aaKnown RBP18.63■□□□□ 0.57
SSB-202ENST00000409333 TBC1D8BQ0IIM8 1120 aa18.63■□□□□ 0.57
SSB-202ENST00000409333 IQCB1Q15051 598 aa18.63■□□□□ 0.57
SSB-202ENST00000409333 GNASQ5JWF2 1037 aa18.63■□□□□ 0.57
SSB-202ENST00000409333 DHX40Q8IX18 779 aaKnown RBP18.63■□□□□ 0.57
SSB-202ENST00000409333 ADSSL1Q8N142 457 aa18.63■□□□□ 0.57
SSB-202ENST00000409333 AOPEPQ8N6M6 819 aa18.63■□□□□ 0.57
SSB-202ENST00000409333 PPP1R13LQ8WUF5 828 aa18.63■□□□□ 0.57
SSB-202ENST00000409333 SLC7A3Q8WY07 619 aa18.63■□□□□ 0.57
SSB-202ENST00000409333 ZBTB10Q96DT7 871 aa18.63■□□□□ 0.57
SSB-202ENST00000409333 FIZ1Q96SL8 496 aa18.63■□□□□ 0.57
SSB-202ENST00000409333 BPIFA3Q9BQP9 254 aa18.63■□□□□ 0.57
SSB-202ENST00000409333 SPC25Q9HBM1 224 aa18.63■□□□□ 0.57
SSB-202ENST00000409333 HMX1Q9NP08 348 aaPredicted RBP18.63■□□□□ 0.57
SSB-202ENST00000409333 CTNND2Q9UQB3 1225 aa18.63■□□□□ 0.57
SSB-202ENST00000409333 DNAH12Q6ZR08 3092 aa18.62■□□□□ 0.57
SSB-202ENST00000409333 NKX3-2P78367 333 aa18.62■□□□□ 0.57
SSB-202ENST00000409333 MFSD10Q14728 455 aa18.62■□□□□ 0.57
SSB-202ENST00000409333 KIAA0753Q2KHM9 967 aa18.62■□□□□ 0.57
SSB-202ENST00000409333 ODR4Q5SWX8 454 aa18.62■□□□□ 0.57
SSB-202ENST00000409333 TMEM143Q96AN5 459 aa18.62■□□□□ 0.57
SSB-202ENST00000409333 MED15Q96RN5 788 aa18.62■□□□□ 0.57
SSB-202ENST00000409333 MRPL44Q9H9J2 332 aaKnown RBP18.62■□□□□ 0.57
SSB-202ENST00000409333 OLFML3Q9NRN5 406 aa18.62■□□□□ 0.57
SSB-202ENST00000409333 PPME1Q9Y570 386 aa18.62■□□□□ 0.57
SSB-202ENST00000409333 MYCNP04198 464 aaPredicted RBP18.61■□□□□ 0.57
SSB-202ENST00000409333 MYBP10242 640 aa18.61■□□□□ 0.57
SSB-202ENST00000409333 NMT1P30419 496 aaKnown RBP18.61■□□□□ 0.57
SSB-202ENST00000409333 COBLL1Q53SF7 1204 aa18.61■□□□□ 0.57
SSB-202ENST00000409333 ZNF484Q5JVG2 852 aa18.61■□□□□ 0.57
SSB-202ENST00000409333 BSNDQ8WZ55 320 aa18.61■□□□□ 0.57
SSB-202ENST00000409333 GTPBP4Q9BZE4 634 aaKnown RBP18.61■□□□□ 0.57
SSB-202ENST00000409333 POLR3FQ9H1D9 316 aaPredicted RBP18.61■□□□□ 0.57
SSB-202ENST00000409333 SEL1LQ9UBV2 794 aa18.61■□□□□ 0.57
SSB-202ENST00000409333 COL1A2P08123 1366 aa18.61■□□□□ 0.57
SSB-202ENST00000409333 HAS3O00219 553 aa18.6■□□□□ 0.57
SSB-202ENST00000409333 HSPA1AP0DMV8 641 aaKnown RBP18.6■□□□□ 0.57
SSB-202ENST00000409333 HSPA1BP0DMV9 641 aaKnown RBP18.6■□□□□ 0.57
SSB-202ENST00000409333 PLS3P13797 630 aa18.6■□□□□ 0.57
SSB-202ENST00000409333 PSEN2P49810 448 aa18.6■□□□□ 0.57
SSB-202ENST00000409333 LBX1P52954 281 aa18.6■□□□□ 0.57
SSB-202ENST00000409333 STX17P56962 302 aa18.6■□□□□ 0.57
SSB-202ENST00000409333 PPFIA1Q13136 1202 aa18.6■□□□□ 0.57
SSB-202ENST00000409333 DRP2Q13474 957 aa18.6■□□□□ 0.57
SSB-202ENST00000409333 FAM178BQ8IXR5 827 aa18.6■□□□□ 0.57
SSB-202ENST00000409333 LRRC71Q8N4P6 559 aa18.6■□□□□ 0.57
SSB-202ENST00000409333 KLHDC9Q8NEP7 349 aa18.6■□□□□ 0.57
SSB-202ENST00000409333 KIFAP3Q92845 792 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms