RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 ERMNQ8TAM6 284 aa23.22■■□□□ 1.31
C4orf48-201ENST00000409248 KCNG4Q8TDN1 519 aa23.22■■□□□ 1.31
C4orf48-201ENST00000409248 JPH2Q9BR39 696 aaPredicted RBP23.22■■□□□ 1.31
C4orf48-201ENST00000409248 SCAND2PQ9GZW5 306 aaPredicted RBP23.22■■□□□ 1.31
C4orf48-201ENST00000409248 RGL1Q9NZL6 768 aa23.22■■□□□ 1.31
C4orf48-201ENST00000409248 SQORQ9Y6N5 450 aa23.22■■□□□ 1.31
C4orf48-201ENST00000409248 KDM3AQ9Y4C1 1321 aa23.22■■□□□ 1.31
C4orf48-201ENST00000409248 LAMA3Q16787 3333 aa23.22■■□□□ 1.31
C4orf48-201ENST00000409248 VWA3AA6NCI4 1184 aa23.21■■□□□ 1.31
C4orf48-201ENST00000409248 STBD1O95210 358 aa23.21■■□□□ 1.31
C4orf48-201ENST00000409248 MARCKSP29966 332 aaPredicted RBP23.21■■□□□ 1.31
C4orf48-201ENST00000409248 CLCN3P51790 818 aa23.21■■□□□ 1.31
C4orf48-201ENST00000409248 WDR5P61964 334 aaKnown RBP23.21■■□□□ 1.31
C4orf48-201ENST00000409248 TMEM62Q0P6H9 643 aa23.21■■□□□ 1.31
C4orf48-201ENST00000409248 RAB30Q15771 203 aa23.21■■□□□ 1.31
C4orf48-201ENST00000409248 FBXO47Q5MNV8 452 aa23.21■■□□□ 1.31
C4orf48-201ENST00000409248 FAM109BQ6ICB4 259 aaPredicted RBP23.21■■□□□ 1.31
C4orf48-201ENST00000409248 EFCAB12Q6NXP0 572 aa23.21■■□□□ 1.31
C4orf48-201ENST00000409248 TSHZ1Q6ZSZ6 1077 aa23.21■■□□□ 1.31
C4orf48-201ENST00000409248 ANO5Q75V66 913 aa23.21■■□□□ 1.31
C4orf48-201ENST00000409248 OTUD6AQ7L8S5 288 aa23.21■■□□□ 1.31
C4orf48-201ENST00000409248 PHOSPHO2Q8TCD6 241 aa23.21■■□□□ 1.31
C4orf48-201ENST00000409248 CHAMP1Q96JM3 812 aa23.21■■□□□ 1.31
C4orf48-201ENST00000409248 CELF4Q9BZC1 486 aaKnown RBP23.21■■□□□ 1.31
C4orf48-201ENST00000409248 GBF1Q92538 1859 aa23.21■■□□□ 1.31
C4orf48-201ENST00000409248 PPP6R2O75170 966 aa23.2■■□□□ 1.3
C4orf48-201ENST00000409248 YWHABP31946 246 aaKnown RBP23.2■■□□□ 1.3
C4orf48-201ENST00000409248 CTTNQ14247 550 aaKnown RBP23.2■■□□□ 1.3
C4orf48-201ENST00000409248 PDIA5Q14554 519 aa23.2■■□□□ 1.3
C4orf48-201ENST00000409248 LPIN1Q14693 890 aa23.2■■□□□ 1.3
C4orf48-201ENST00000409248 PLA2G4FQ68DD2 849 aa23.2■■□□□ 1.3
C4orf48-201ENST00000409248 TPH2Q8IWU9 490 aa23.2■■□□□ 1.3
C4orf48-201ENST00000409248 EXOC8Q8IYI6 725 aa23.2■■□□□ 1.3
C4orf48-201ENST00000409248 KRI1Q8N9T8 703 aaKnown RBP23.2■■□□□ 1.3
C4orf48-201ENST00000409248 SPATA32Q96LK8 384 aa23.2■■□□□ 1.3
C4orf48-201ENST00000409248 CCDC43Q96MW1 224 aaKnown RBP23.2■■□□□ 1.3
C4orf48-201ENST00000409248 CYP26B1Q9NR63 512 aa23.2■■□□□ 1.3
C4orf48-201ENST00000409248 AKT3Q9Y243 479 aa23.2■■□□□ 1.3
C4orf48-201ENST00000409248 LOXHD1Q8IVV2 1947 aa23.2■■□□□ 1.3
C4orf48-201ENST00000409248 TMEM265A0A087WTH1 108 aa23.19■■□□□ 1.3
C4orf48-201ENST00000409248 TMEM150BA6NC51 233 aa23.19■■□□□ 1.3
C4orf48-201ENST00000409248 LYPLA2O95372 231 aa23.19■■□□□ 1.3
C4orf48-201ENST00000409248 DNAJB2P25686 324 aa23.19■■□□□ 1.3
C4orf48-201ENST00000409248 DNM2P50570 870 aa23.19■■□□□ 1.3
C4orf48-201ENST00000409248 IL17AQ16552 155 aa23.19■■□□□ 1.3
C4orf48-201ENST00000409248 ZNF697Q5TEC3 545 aa23.19■■□□□ 1.3
C4orf48-201ENST00000409248 HAUS3Q68CZ6 603 aa23.19■■□□□ 1.3
C4orf48-201ENST00000409248 LRRC71Q8N4P6 559 aa23.19■■□□□ 1.3
C4orf48-201ENST00000409248 LINC01465Q8N7H1 131 aa23.19■■□□□ 1.3
C4orf48-201ENST00000409248 SLC7A3Q8WY07 619 aa23.19■■□□□ 1.3
C4orf48-201ENST00000409248 CEP170P1Q96L14 293 aa23.19■■□□□ 1.3
C4orf48-201ENST00000409248 HSD17B14Q9BPX1 270 aa23.19■■□□□ 1.3
C4orf48-201ENST00000409248 SUGCTQ9HAC7 445 aa23.19■■□□□ 1.3
C4orf48-201ENST00000409248 TUFT1Q9NNX1 390 aa23.19■■□□□ 1.3
C4orf48-201ENST00000409248 WRAP73Q9P2S5 460 aaPredicted RBP23.19■■□□□ 1.3
C4orf48-201ENST00000409248 LRWD1Q9UFC0 647 aa23.19■■□□□ 1.3
C4orf48-201ENST00000409248 MSRAQ9UJ68 235 aa23.19■■□□□ 1.3
C4orf48-201ENST00000409248 FBXO2Q9UK22 296 aaPredicted RBP23.19■■□□□ 1.3
C4orf48-201ENST00000409248 RCOR1Q9UKL0 485 aa23.19■■□□□ 1.3
C4orf48-201ENST00000409248 SRPRBQ9Y5M8 271 aaKnown RBP23.19■■□□□ 1.3
C4orf48-201ENST00000409248 STK24Q9Y6E0 443 aa23.19■■□□□ 1.3
C4orf48-201ENST00000409248 MYH15Q9Y2K3 1946 aa23.19■■□□□ 1.3
C4orf48-201ENST00000409248 PTPRSQ13332 1948 aa23.18■■□□□ 1.3
C4orf48-201ENST00000409248 SLITRK3O94933 977 aa23.18■■□□□ 1.3
C4orf48-201ENST00000409248 LONP1P36776 959 aaKnown RBP23.18■■□□□ 1.3
C4orf48-201ENST00000409248 RFC5P40937 340 aa23.18■■□□□ 1.3
C4orf48-201ENST00000409248 TCTN1Q2MV58 587 aa23.18■■□□□ 1.3
C4orf48-201ENST00000409248 IGSF22Q8N9C0 903 aa23.18■■□□□ 1.3
C4orf48-201ENST00000409248 LEO1Q8WVC0 666 aaPredicted RBP23.18■■□□□ 1.3
C4orf48-201ENST00000409248 AK8Q96MA6 479 aa23.18■■□□□ 1.3
C4orf48-201ENST00000409248 GINS2Q9Y248 185 aa23.18■■□□□ 1.3
C4orf48-201ENST00000409248 GRXCR1A8MXD5 290 aa23.17■■□□□ 1.3
C4orf48-201ENST00000409248 MAFO75444 373 aaPredicted RBP23.17■■□□□ 1.3
C4orf48-201ENST00000409248 AMHP03971 560 aa23.17■■□□□ 1.3
C4orf48-201ENST00000409248 VTNP04004 478 aa23.17■■□□□ 1.3
C4orf48-201ENST00000409248 ME1P48163 572 aa23.17■■□□□ 1.3
C4orf48-201ENST00000409248 POLGP54098 1239 aaPredicted RBP23.17■■□□□ 1.3
C4orf48-201ENST00000409248 PAK2Q13177 524 aa23.17■■□□□ 1.3
C4orf48-201ENST00000409248 ODR4Q5SWX8 454 aa23.17■■□□□ 1.3
C4orf48-201ENST00000409248 FAM43BQ6ZT52 329 aaPredicted RBP23.17■■□□□ 1.3
C4orf48-201ENST00000409248 HERC6Q8IVU3 1022 aa23.17■■□□□ 1.3
C4orf48-201ENST00000409248 TIFAQ96CG3 184 aa23.17■■□□□ 1.3
C4orf48-201ENST00000409248 CEP89Q96ST8 783 aa23.17■■□□□ 1.3
C4orf48-201ENST00000409248 PBX4Q9BYU1 374 aa23.17■■□□□ 1.3
C4orf48-201ENST00000409248 PCDHA11Q9Y5I1 949 aa23.17■■□□□ 1.3
C4orf48-201ENST00000409248 IGKV6-21A0A0C4DH24 114 aa23.16■■□□□ 1.3
C4orf48-201ENST00000409248 GAS2O43903 313 aaKnown RBP23.16■■□□□ 1.3
C4orf48-201ENST00000409248 CRYBB1P53674 252 aaPredicted RBP23.16■■□□□ 1.3
C4orf48-201ENST00000409248 NPEPPSP55786 919 aa23.16■■□□□ 1.3
C4orf48-201ENST00000409248 CDC42EP1Q00587 391 aa23.16■■□□□ 1.3
C4orf48-201ENST00000409248 KIZQ2M2Z5 673 aa23.16■■□□□ 1.3
C4orf48-201ENST00000409248 XKR9Q5GH70 373 aa23.16■■□□□ 1.3
C4orf48-201ENST00000409248 SCLT1Q96NL6 688 aa23.16■■□□□ 1.3
C4orf48-201ENST00000409248 SH2D3AQ9BRG2 576 aa23.16■■□□□ 1.3
C4orf48-201ENST00000409248 POLR3CQ9BUI4 534 aaPredicted RBP23.16■■□□□ 1.3
C4orf48-201ENST00000409248 OSBPL7Q9BZF2 842 aa23.16■■□□□ 1.3
C4orf48-201ENST00000409248 ANKEF1Q9NU02 776 aa23.16■■□□□ 1.3
C4orf48-201ENST00000409248 CUTAO60888 179 aa23.15■■□□□ 1.3
C4orf48-201ENST00000409248 CD52P31358 61 aa23.15■■□□□ 1.3
C4orf48-201ENST00000409248 DEFB103AP81534 67 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms