RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 WDR81Q562E7 1941 aa20.82■□□□□ 0.92
USP39-202ENST00000409025 EPHB6O15197 1021 aa20.82■□□□□ 0.92
USP39-202ENST00000409025 PPP1R37O75864 691 aa20.82■□□□□ 0.92
USP39-202ENST00000409025 XRCC5P13010 732 aaKnown RBP20.82■□□□□ 0.92
USP39-202ENST00000409025 SWSAP1Q6NVH7 229 aa20.82■□□□□ 0.92
USP39-202ENST00000409025 MIS18BP1Q6P0N0 1132 aa20.82■□□□□ 0.92
USP39-202ENST00000409025 SYCP3Q8IZU3 236 aa20.82■□□□□ 0.92
USP39-202ENST00000409025 SLC10A4Q96EP9 437 aa20.82■□□□□ 0.92
USP39-202ENST00000409025 SH2D3AQ9BRG2 576 aa20.82■□□□□ 0.92
USP39-202ENST00000409025 DOCK5Q9H7D0 1870 aa20.82■□□□□ 0.92
USP39-202ENST00000409025 AFPP02771 609 aaKnown RBP20.82■□□□□ 0.92
USP39-202ENST00000409025 HNRNPH3P31942 346 aaKnown RBP20.82■□□□□ 0.92
USP39-202ENST00000409025 CYLC1P35663 651 aaPredicted RBP20.82■□□□□ 0.92
USP39-202ENST00000409025 PSMC2P35998 433 aaKnown RBP20.82■□□□□ 0.92
USP39-202ENST00000409025 NPEPPSP55786 919 aa20.82■□□□□ 0.92
USP39-202ENST00000409025 GNG11P61952 73 aa20.82■□□□□ 0.92
USP39-202ENST00000409025 SP4Q02446 784 aa20.82■□□□□ 0.92
USP39-202ENST00000409025 SNAPC2Q13487 334 aa20.82■□□□□ 0.92
USP39-202ENST00000409025 ABHD15Q6UXT9 468 aa20.82■□□□□ 0.92
USP39-202ENST00000409025 ANO5Q75V66 913 aa20.82■□□□□ 0.92
USP39-202ENST00000409025 CACNA2D4Q7Z3S7 1137 aa20.82■□□□□ 0.92
USP39-202ENST00000409025 TMEM206Q9H813 350 aa20.82■□□□□ 0.92
USP39-202ENST00000409025 LZTFL1Q9NQ48 299 aa20.82■□□□□ 0.92
USP39-202ENST00000409025 SRCAPQ6ZRS2 3230 aa20.81■□□□□ 0.92
USP39-202ENST00000409025 SOWAHBA6NEL2 793 aa20.81■□□□□ 0.92
USP39-202ENST00000409025 CASP4P49662 377 aa20.81■□□□□ 0.92
USP39-202ENST00000409025 GPAT2Q6NUI2 795 aa20.81■□□□□ 0.92
USP39-202ENST00000409025 SEPT14Q6ZU15 432 aa20.81■□□□□ 0.92
USP39-202ENST00000409025 CCDC170Q8IYT3 715 aa20.81■□□□□ 0.92
USP39-202ENST00000409025 FAM133AQ8N9E0 248 aa20.81■□□□□ 0.92
USP39-202ENST00000409025 SLC17A8Q8NDX2 589 aa20.81■□□□□ 0.92
USP39-202ENST00000409025 MKNK1Q9BUB5 465 aa20.81■□□□□ 0.92
USP39-202ENST00000409025 LSM14BQ9BX40 385 aaKnown RBP20.81■□□□□ 0.92
USP39-202ENST00000409025 AGPAT3Q9NRZ7 376 aa20.81■□□□□ 0.92
USP39-202ENST00000409025 CEP72Q9P209 647 aa20.81■□□□□ 0.92
USP39-202ENST00000409025 RBPJLQ9UBG7 517 aa20.81■□□□□ 0.92
USP39-202ENST00000409025 PLAGL2Q9UPG8 496 aa20.81■□□□□ 0.92
USP39-202ENST00000409025 UNCXA6NJT0 531 aa20.8■□□□□ 0.92
USP39-202ENST00000409025 EDNRBP24530 442 aa20.8■□□□□ 0.92
USP39-202ENST00000409025 SP2Q02086 613 aa20.8■□□□□ 0.92
USP39-202ENST00000409025 FSTL1Q12841 308 aa20.8■□□□□ 0.92
USP39-202ENST00000409025 ARHGAP29Q52LW3 1261 aa20.8■□□□□ 0.92
USP39-202ENST00000409025 FAM102BQ5T8I3 360 aa20.8■□□□□ 0.92
USP39-202ENST00000409025 MPHOSPH6Q99547 160 aaKnown RBP20.8■□□□□ 0.92
USP39-202ENST00000409025 NHEJ1Q9H9Q4 299 aaPredicted RBP20.8■□□□□ 0.92
USP39-202ENST00000409025 TXNRD2Q9NNW7 524 aa20.8■□□□□ 0.92
USP39-202ENST00000409025 ZNF862O60290 1169 aa20.8■□□□□ 0.92
USP39-202ENST00000409025 SUPT20HL2P0C7V6 817 aa20.8■□□□□ 0.92
USP39-202ENST00000409025 CASQ1P31415 396 aa20.8■□□□□ 0.92
USP39-202ENST00000409025 GJA5P36382 358 aa20.8■□□□□ 0.92
USP39-202ENST00000409025 DCAF17Q5H9S7 520 aaPredicted RBP20.8■□□□□ 0.92
USP39-202ENST00000409025 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.8■□□□□ 0.92
USP39-202ENST00000409025 RRAGAQ7L523 313 aa20.8■□□□□ 0.92
USP39-202ENST00000409025 CYFIP1Q7L576 1253 aa20.8■□□□□ 0.92
USP39-202ENST00000409025 FAM186BQ8IYM0 893 aa20.8■□□□□ 0.92
USP39-202ENST00000409025 BAP1Q92560 729 aa20.8■□□□□ 0.92
USP39-202ENST00000409025 CEP170P1Q96L14 293 aa20.8■□□□□ 0.92
USP39-202ENST00000409025 ACCSQ96QU6 501 aa20.8■□□□□ 0.92
USP39-202ENST00000409025 NUCKS1Q9H1E3 243 aaKnown RBP20.8■□□□□ 0.92
USP39-202ENST00000409025 IKZF4Q9H2S9 585 aa20.8■□□□□ 0.92
USP39-202ENST00000409025 ST6GALNAC4Q9H4F1 302 aa20.8■□□□□ 0.92
USP39-202ENST00000409025 ZNF408Q9H9D4 720 aa20.8■□□□□ 0.92
USP39-202ENST00000409025 KIF5CO60282 957 aa20.79■□□□□ 0.92
USP39-202ENST00000409025 SORBS3O60504 671 aa20.79■□□□□ 0.92
USP39-202ENST00000409025 STBD1O95210 358 aa20.79■□□□□ 0.92
USP39-202ENST00000409025 KRT83P78385 493 aa20.79■□□□□ 0.92
USP39-202ENST00000409025 TCERG1LQ5VWI1 586 aa20.79■□□□□ 0.92
USP39-202ENST00000409025 PDXDC1Q6P996 788 aa20.79■□□□□ 0.92
USP39-202ENST00000409025 CCDC60Q8IWA6 550 aaPredicted RBP20.79■□□□□ 0.92
USP39-202ENST00000409025 CRACR2AQ9BSW2 395 aa20.79■□□□□ 0.92
USP39-202ENST00000409025 DMAC2Q9NW81 257 aa20.79■□□□□ 0.92
USP39-202ENST00000409025 FRMD4BQ9Y2L6 1034 aa20.79■□□□□ 0.92
USP39-202ENST00000409025 LRRC53A6NM62 1247 aa20.78■□□□□ 0.92
USP39-202ENST00000409025 IPO7O95373 1038 aaKnown RBP20.78■□□□□ 0.92
USP39-202ENST00000409025 PEX3P56589 373 aa20.78■□□□□ 0.92
USP39-202ENST00000409025 MYBPC2Q14324 1141 aa20.78■□□□□ 0.92
USP39-202ENST00000409025 HAUS6Q7Z4H7 955 aa20.78■□□□□ 0.92
USP39-202ENST00000409025 SLC9A9Q8IVB4 645 aa20.78■□□□□ 0.92
USP39-202ENST00000409025 GPRC5CQ9NQ84 441 aa20.78■□□□□ 0.92
USP39-202ENST00000409025 CGNQ9P2M7 1197 aaKnown RBP20.78■□□□□ 0.92
USP39-202ENST00000409025 TELO2Q9Y4R8 837 aa20.78■□□□□ 0.92
USP39-202ENST00000409025 CTIFO43310 598 aaKnown RBP20.78■□□□□ 0.92
USP39-202ENST00000409025 NOL4O94818 638 aa20.78■□□□□ 0.92
USP39-202ENST00000409025 CYP2J2P51589 502 aa20.78■□□□□ 0.92
USP39-202ENST00000409025 NCKAP1LP55160 1127 aa20.78■□□□□ 0.92
USP39-202ENST00000409025 GTF2BQ00403 316 aa20.78■□□□□ 0.92
USP39-202ENST00000409025 PRKCEQ02156 737 aa20.78■□□□□ 0.92
USP39-202ENST00000409025 KCTD2Q14681 263 aa20.78■□□□□ 0.92
USP39-202ENST00000409025 Q3C1V9 767 aa20.78■□□□□ 0.92
USP39-202ENST00000409025 MAP1SQ66K74 1059 aaPredicted RBP20.78■□□□□ 0.92
USP39-202ENST00000409025 KIFAP3Q92845 792 aa20.78■□□□□ 0.92
USP39-202ENST00000409025 BORCS6Q96GS4 357 aa20.78■□□□□ 0.92
USP39-202ENST00000409025 L2HGDHQ9H9P8 463 aa20.78■□□□□ 0.92
USP39-202ENST00000409025 SEPT9Q9UHD8 586 aaPredicted RBP20.78■□□□□ 0.92
USP39-202ENST00000409025 PNMA3Q9UL41 463 aa20.78■□□□□ 0.92
USP39-202ENST00000409025 ARID2Q68CP9 1835 aa20.77■□□□□ 0.92
USP39-202ENST00000409025 IGSF9BQ9UPX0 1349 aa20.77■□□□□ 0.92
USP39-202ENST00000409025 A0A0U1RQJ8 604 aa20.77■□□□□ 0.92
USP39-202ENST00000409025 EIF3CLB5ME19 914 aaKnown RBP20.77■□□□□ 0.92
USP39-202ENST00000409025 ATG7O95352 703 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms