RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 PCDHA4Q9UN74 947 aa17.69■□□□□ 0.42
LSP1-204ENST00000406638 M0R2N6 131 aa17.68■□□□□ 0.42
LSP1-204ENST00000406638 ENTPD3O75355 529 aa17.68■□□□□ 0.42
LSP1-204ENST00000406638 KLRC1P26715 233 aa17.68■□□□□ 0.42
LSP1-204ENST00000406638 ICA1Q05084 483 aa17.68■□□□□ 0.42
LSP1-204ENST00000406638 ENOX2Q16206 610 aaKnown RBP17.68■□□□□ 0.42
LSP1-204ENST00000406638 ASTE1Q2TB18 679 aaPredicted RBP17.68■□□□□ 0.42
LSP1-204ENST00000406638 VWA3BQ502W6 1294 aa17.68■□□□□ 0.42
LSP1-204ENST00000406638 KIAA1755Q5JYT7 1200 aa17.68■□□□□ 0.42
LSP1-204ENST00000406638 USP38Q8NB14 1042 aa17.68■□□□□ 0.42
LSP1-204ENST00000406638 ACER1Q8TDN7 264 aa17.68■□□□□ 0.42
LSP1-204ENST00000406638 HDAC9Q9UKV0 1011 aa17.68■□□□□ 0.42
LSP1-204ENST00000406638 FZD1Q9UP38 647 aa17.68■□□□□ 0.42
LSP1-204ENST00000406638 TNNC1P63316 161 aa17.68■□□□□ 0.42
LSP1-204ENST00000406638 KRT71Q3SY84 523 aa17.68■□□□□ 0.42
LSP1-204ENST00000406638 TBC1D10BQ4KMP7 808 aaPredicted RBP17.68■□□□□ 0.42
LSP1-204ENST00000406638 FAM133BQ5BKY9 247 aaKnown RBP17.68■□□□□ 0.42
LSP1-204ENST00000406638 CACNA2D4Q7Z3S7 1137 aa17.68■□□□□ 0.42
LSP1-204ENST00000406638 AP1M1Q9BXS5 423 aa17.68■□□□□ 0.42
LSP1-204ENST00000406638 SLC39A2Q9NP94 309 aa17.68■□□□□ 0.42
LSP1-204ENST00000406638 MYOZ2Q9NPC6 264 aa17.68■□□□□ 0.42
LSP1-204ENST00000406638 PANK4Q9NVE7 773 aa17.68■□□□□ 0.42
LSP1-204ENST00000406638 KBTBD4Q9NVX7 518 aa17.68■□□□□ 0.42
LSP1-204ENST00000406638 BIN2Q9UBW5 565 aaPredicted RBP17.68■□□□□ 0.42
LSP1-204ENST00000406638 TRPC6Q9Y210 931 aa17.68■□□□□ 0.42
LSP1-204ENST00000406638 C15orf41Q9Y2V0 281 aa17.68■□□□□ 0.42
LSP1-204ENST00000406638 MYO3BQ8WXR4 1341 aa17.68■□□□□ 0.42
LSP1-204ENST00000406638 ZNF541Q9H0D2 1346 aa17.68■□□□□ 0.42
LSP1-204ENST00000406638 CTNND1O60716 968 aaKnown RBP17.68■□□□□ 0.42
LSP1-204ENST00000406638 GMPSP49915 693 aaPredicted RBP17.68■□□□□ 0.42
LSP1-204ENST00000406638 MAP2K1Q02750 393 aaPredicted RBP17.68■□□□□ 0.42
LSP1-204ENST00000406638 GRIPAP1Q4V328 841 aa17.68■□□□□ 0.42
LSP1-204ENST00000406638 PRAMEF18Q5VWM3 479 aa17.68■□□□□ 0.42
LSP1-204ENST00000406638 ARL6IP4Q66PJ3 421 aaKnown RBP17.68■□□□□ 0.42
LSP1-204ENST00000406638 DTHD1Q6ZMT9 781 aa17.68■□□□□ 0.42
LSP1-204ENST00000406638 MICAL1Q8TDZ2 1067 aa17.68■□□□□ 0.42
LSP1-204ENST00000406638 BAP1Q92560 729 aa17.68■□□□□ 0.42
LSP1-204ENST00000406638 LRRC45Q96CN5 670 aa17.68■□□□□ 0.42
LSP1-204ENST00000406638 CHMP6Q96FZ7 201 aa17.68■□□□□ 0.42
LSP1-204ENST00000406638 GLIS2Q9BZE0 524 aaPredicted RBP17.68■□□□□ 0.42
LSP1-204ENST00000406638 TMEM60Q9H2L4 133 aa17.68■□□□□ 0.42
LSP1-204ENST00000406638 GOLPH3Q9H4A6 298 aa17.68■□□□□ 0.42
LSP1-204ENST00000406638 RIOX1Q9H6W3 641 aa17.68■□□□□ 0.42
LSP1-204ENST00000406638 TMOD2Q9NZR1 351 aa17.68■□□□□ 0.42
LSP1-204ENST00000406638 ATRNL1Q5VV63 1379 aa17.67■□□□□ 0.42
LSP1-204ENST00000406638 SMCO2A6NFE2 343 aa17.67■□□□□ 0.42
LSP1-204ENST00000406638 GHRP10912 638 aa17.67■□□□□ 0.42
LSP1-204ENST00000406638 BRCA1P38398 1863 aaKnown RBP17.67■□□□□ 0.42
LSP1-204ENST00000406638 ASIC1P78348 528 aa17.67■□□□□ 0.42
LSP1-204ENST00000406638 ZYXQ15942 572 aaKnown RBP17.67■□□□□ 0.42
LSP1-204ENST00000406638 SOGA3Q5TF21 947 aa17.67■□□□□ 0.42
LSP1-204ENST00000406638 CCDC197Q8NCU1 140 aa17.67■□□□□ 0.42
LSP1-204ENST00000406638 SPAG5Q96R06 1193 aa17.67■□□□□ 0.42
LSP1-204ENST00000406638 SPATS2LQ9NUQ6 558 aaKnown RBP17.67■□□□□ 0.42
LSP1-204ENST00000406638 CD2APQ9Y5K6 639 aa17.67■□□□□ 0.42
LSP1-204ENST00000406638 GRID2IPA4D2P6 1211 aa17.67■□□□□ 0.42
LSP1-204ENST00000406638 KCNK3O14649 394 aa17.67■□□□□ 0.42
LSP1-204ENST00000406638 ARID5AQ03989 594 aa17.67■□□□□ 0.42
LSP1-204ENST00000406638 MEI1Q5TIA1 1274 aa17.67■□□□□ 0.42
LSP1-204ENST00000406638 ARMC9Q7Z3E5 817 aa17.67■□□□□ 0.42
LSP1-204ENST00000406638 AGBL3Q8NEM8 1001 aa17.67■□□□□ 0.42
LSP1-204ENST00000406638 AGAP11Q8TF27 550 aa17.67■□□□□ 0.42
LSP1-204ENST00000406638 CCDC17Q96LX7 622 aa17.67■□□□□ 0.42
LSP1-204ENST00000406638 SEMA6BQ9H3T3 888 aa17.67■□□□□ 0.42
LSP1-204ENST00000406638 PSME4Q14997 1843 aa17.66■□□□□ 0.42
LSP1-204ENST00000406638 PAEPP09466 180 aa17.66■□□□□ 0.42
LSP1-204ENST00000406638 MYBP10242 640 aa17.66■□□□□ 0.42
LSP1-204ENST00000406638 TRAPPC10P48553 1259 aa17.66■□□□□ 0.42
LSP1-204ENST00000406638 HGSNATQ68CP4 663 aa17.66■□□□□ 0.42
LSP1-204ENST00000406638 SLFN13Q68D06 897 aa17.66■□□□□ 0.42
LSP1-204ENST00000406638 PARD3BQ8TEW8 1205 aa17.66■□□□□ 0.42
LSP1-204ENST00000406638 P3H4Q92791 437 aa17.66■□□□□ 0.42
LSP1-204ENST00000406638 ZBTB10Q96DT7 871 aa17.66■□□□□ 0.42
LSP1-204ENST00000406638 UIMC1Q96RL1 719 aa17.66■□□□□ 0.42
LSP1-204ENST00000406638 SEC63Q9UGP8 760 aaKnown RBP17.66■□□□□ 0.42
LSP1-204ENST00000406638 FER1L6Q2WGJ9 1857 aa17.66■□□□□ 0.42
LSP1-204ENST00000406638 EIF4E1BA6NMX2 242 aaKnown RBP17.66■□□□□ 0.42
LSP1-204ENST00000406638 DIAPH2O60879 1101 aa17.66■□□□□ 0.42
LSP1-204ENST00000406638 UBE2SQ16763 222 aa17.66■□□□□ 0.42
LSP1-204ENST00000406638 CAPRIN2Q6IMN6 1127 aaKnown RBP17.66■□□□□ 0.42
LSP1-204ENST00000406638 MICALL2Q8IY33 904 aa17.66■□□□□ 0.42
LSP1-204ENST00000406638 FAM151AQ8WW52 585 aa17.66■□□□□ 0.42
LSP1-204ENST00000406638 ZBED3Q96IU2 234 aaPredicted RBP17.66■□□□□ 0.42
LSP1-204ENST00000406638 ZNF570Q96NI8 536 aa17.66■□□□□ 0.42
LSP1-204ENST00000406638 XPO6Q96QU8 1125 aaKnown RBP17.66■□□□□ 0.42
LSP1-204ENST00000406638 PACSIN1Q9BY11 444 aa17.66■□□□□ 0.42
LSP1-204ENST00000406638 KANSL2Q9H9L4 492 aa17.66■□□□□ 0.42
LSP1-204ENST00000406638 BATF3Q9NR55 127 aa17.66■□□□□ 0.42
LSP1-204ENST00000406638 NT5C2P49902 561 aa17.65■□□□□ 0.42
LSP1-204ENST00000406638 DGKZQ13574 1117 aa17.65■□□□□ 0.42
LSP1-204ENST00000406638 SAMD1Q6SPF0 538 aaPredicted RBP17.65■□□□□ 0.42
LSP1-204ENST00000406638 TAX1BP1Q86VP1 789 aa17.65■□□□□ 0.42
LSP1-204ENST00000406638 SAAL1Q96ER3 474 aa17.65■□□□□ 0.42
LSP1-204ENST00000406638 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.65■□□□□ 0.42
LSP1-204ENST00000406638 DDX47Q9H0S4 455 aaKnown RBP17.65■□□□□ 0.42
LSP1-204ENST00000406638 GGT7Q9UJ14 662 aa17.65■□□□□ 0.42
LSP1-204ENST00000406638 F5H6K3 240 aa17.65■□□□□ 0.42
LSP1-204ENST00000406638 DAPK3O43293 454 aa17.65■□□□□ 0.42
LSP1-204ENST00000406638 NPM3O75607 178 aaKnown RBP17.65■□□□□ 0.42
LSP1-204ENST00000406638 NDUFB10O96000 172 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms