RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 KRT26Q7Z3Y9 468 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 RASSF3Q86WH2 238 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 SYNE4Q8N205 404 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 MB21D1Q8N884 522 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 RAPGEF5Q92565 580 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 CNOT6LQ96LI5 555 aaKnown RBP6.31□□□□□ -1.4
HDAC9-203ENST00000406072 TUBB6Q9BUF5 446 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 LSM14BQ9BX40 385 aaKnown RBP6.31□□□□□ -1.4
HDAC9-203ENST00000406072 MOV10L1Q9BXT6 1211 aaKnown RBP6.31□□□□□ -1.4
HDAC9-203ENST00000406072 CUEDC2Q9H467 287 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 MKNK2Q9HBH9 465 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 UTP6Q9NYH9 597 aaKnown RBP6.31□□□□□ -1.4
HDAC9-203ENST00000406072 VPS54Q9P1Q0 977 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 SNX24Q9Y343 169 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 MCF2LO15068 1137 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 ATP6V1G1O75348 118 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 PYGLP06737 847 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 RFC5P40937 340 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 MCAMP43121 646 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 COPS2P61201 443 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 ELF3P78545 371 aaPredicted RBP6.31□□□□□ -1.4
HDAC9-203ENST00000406072 MRPS9P82933 396 aaKnown RBP6.31□□□□□ -1.4
HDAC9-203ENST00000406072 BYSLQ13895 437 aaKnown RBP6.31□□□□□ -1.4
HDAC9-203ENST00000406072 KRT79Q5XKE5 535 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 CMTR1Q8N1G2 835 aaKnown RBP6.31□□□□□ -1.4
HDAC9-203ENST00000406072 SYT2Q8N9I0 419 aaPredicted RBP6.31□□□□□ -1.4
HDAC9-203ENST00000406072 SLC17A8Q8NDX2 589 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 APPBP2Q92624 585 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 GORASP1Q9BQQ3 440 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 KDM4CQ9H3R0 1056 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 NDE1Q9NXR1 346 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 TFR2Q9UP52 801 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 A0A0G2JND7 137 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 MAGEA13PA6NCF6 341 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 TSPY2A6NKD2 308 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 KDM1AO60341 852 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 PALMO75781 387 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 S100BP04271 92 aaPredicted RBP6.31□□□□□ -1.4
HDAC9-203ENST00000406072 ATICP31939 592 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 RCAN1P53805 252 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 MED21Q13503 144 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 RBM26Q5T8P6 1007 aaKnown RBP6.31□□□□□ -1.4
HDAC9-203ENST00000406072 KRT80Q6KB66 452 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 CYP4F22Q6NT55 531 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 HEATR3Q7Z4Q2 680 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 YTHDF3Q7Z739 585 aaKnown RBP6.31□□□□□ -1.4
HDAC9-203ENST00000406072 AGAP11Q8TF27 550 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 GFM2Q969S9 779 aaKnown RBP6.31□□□□□ -1.4
HDAC9-203ENST00000406072 MS4A14Q96JA4 679 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 ZNF594Q96JF6 807 aaPredicted RBP6.31□□□□□ -1.4
HDAC9-203ENST00000406072 TGS1Q96RS0 853 aaKnown RBP6.31□□□□□ -1.4
HDAC9-203ENST00000406072 DRC3Q9H069 523 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 FGFR1OP2Q9NVK5 253 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 ZFP69BQ9UJL9 534 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 TRAF3IP3Q9Y228 551 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 IRF6O14896 467 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 GAKO14976 1311 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 DAPK3O43293 454 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 HSPD1P10809 573 aaKnown RBP6.31□□□□□ -1.4
HDAC9-203ENST00000406072 CA4P22748 312 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 ZNF76P36508 570 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 CACNA2D1P54289 1103 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 FMR1Q06787 632 aaKnown RBP eCLIP6.31□□□□□ -1.4
HDAC9-203ENST00000406072 ZCWPW2Q504Y3 356 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 TRMT1LQ7Z2T5 733 aaKnown RBP6.31□□□□□ -1.4
HDAC9-203ENST00000406072 WDR75Q8IWA0 830 aaKnown RBP6.31□□□□□ -1.4
HDAC9-203ENST00000406072 AGGF1Q8N302 714 aaeCLIP6.31□□□□□ -1.4
HDAC9-203ENST00000406072 PAF1Q8N7H5 531 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 SPATA5Q8NB90 893 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 SUPT20HQ8NEM7 779 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 SREK1Q8WXA9 508 aaKnown RBP6.31□□□□□ -1.4
HDAC9-203ENST00000406072 CELF1Q92879 486 aaKnown RBP6.31□□□□□ -1.4
HDAC9-203ENST00000406072 NMD3Q96D46 503 aaKnown RBP6.31□□□□□ -1.4
HDAC9-203ENST00000406072 PBKQ96KB5 322 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 FAM161BQ96MY7 647 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 MTFR1LQ9H019 292 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 SEC31BQ9NQW1 1179 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 RBM12Q9NTZ6 932 aaKnown RBP6.31□□□□□ -1.4
HDAC9-203ENST00000406072 ADAMTS1Q9UHI8 967 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 DCTN4Q9UJW0 460 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 NUB1Q9Y5A7 615 aa6.31□□□□□ -1.4
HDAC9-203ENST00000406072 CFAP69A5D8W1 941 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 SART1O43290 800 aaKnown RBP6.3□□□□□ -1.4
HDAC9-203ENST00000406072 UBOX5O94941 541 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 UPP2O95045 317 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 BRAFP15056 766 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 SFSWAPQ12872 951 aaKnown RBP6.3□□□□□ -1.4
HDAC9-203ENST00000406072 NR1I3Q14994 352 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 TMED2Q15363 201 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 FAM182BQ5T319 152 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 C1orf146Q5VVC0 180 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 SRRM1Q8IYB3 904 aaKnown RBP6.3□□□□□ -1.4
HDAC9-203ENST00000406072 LRRC34Q8IZ02 419 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 ENGASEQ8NFI3 743 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 CNKSR1Q969H4 720 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 ERP27Q96DN0 273 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 EPSTI1Q96J88 318 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 FAM84BQ96KN1 310 aaPredicted RBP6.3□□□□□ -1.4
HDAC9-203ENST00000406072 NR1H4Q96RI1 486 aaPredicted RBP6.3□□□□□ -1.4
HDAC9-203ENST00000406072 NDEL1Q9GZM8 345 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms