RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, human

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1E-205	ENST00000405675	FSTL1	Q12841	308 aa		31.85	■■■□□ 2.69
CSNK1E-205	ENST00000405675	NAA30	Q147X3	362 aa	Predicted RBP	31.85	■■■□□ 2.69
CSNK1E-205	ENST00000405675	ZNF746	Q6NUN9	644 aa	Predicted RBP	31.85	■■■□□ 2.69
CSNK1E-205	ENST00000405675	NEK11	Q8NG66	645 aa		31.85	■■■□□ 2.69
CSNK1E-205	ENST00000405675	STRA6	Q9BX79	667 aa		31.85	■■■□□ 2.69
CSNK1E-205	ENST00000405675	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	31.85	■■■□□ 2.69
CSNK1E-205	ENST00000405675	MAFG	O15525	162 aa		31.84	■■■□□ 2.69
CSNK1E-205	ENST00000405675	NOL4	O94818	638 aa		31.84	■■■□□ 2.69
CSNK1E-205	ENST00000405675	APBA1	Q02410	837 aa		31.84	■■■□□ 2.69
CSNK1E-205	ENST00000405675	PLA2G4F	Q68DD2	849 aa		31.84	■■■□□ 2.69
CSNK1E-205	ENST00000405675	ZNF710	Q8N1W2	664 aa		31.84	■■■□□ 2.69
CSNK1E-205	ENST00000405675	SENP7	Q9BQF6	1050 aa		31.84	■■■□□ 2.69
CSNK1E-205	ENST00000405675	LSM14B	Q9BX40	385 aa	Known RBP	31.84	■■■□□ 2.69
CSNK1E-205	ENST00000405675	PNMA3	Q9UL41	463 aa		31.84	■■■□□ 2.69
CSNK1E-205	ENST00000405675	ZBTB48	P10074	688 aa	Predicted RBP	31.84	■■■□□ 2.69
CSNK1E-205	ENST00000405675	RPL13	P26373	211 aa	Known RBP	31.84	■■■□□ 2.69
CSNK1E-205	ENST00000405675	CASQ1	P31415	396 aa		31.84	■■■□□ 2.69
CSNK1E-205	ENST00000405675	HNRNPH3	P31942	346 aa	Known RBP	31.84	■■■□□ 2.69
CSNK1E-205	ENST00000405675	UBE4B	O95155	1302 aa		31.84	■■■□□ 2.69
CSNK1E-205	ENST00000405675	KIAA1217	Q5T5P2	1943 aa		31.83	■■■□□ 2.69
CSNK1E-205	ENST00000405675	PPP1R37	O75864	691 aa		31.83	■■■□□ 2.69
CSNK1E-205	ENST00000405675	CDK17	Q00537	523 aa		31.83	■■■□□ 2.69
CSNK1E-205	ENST00000405675	RRAGA	Q7L523	313 aa		31.83	■■■□□ 2.69
CSNK1E-205	ENST00000405675	GPIHBP1	Q8IV16	184 aa		31.83	■■■□□ 2.69
CSNK1E-205	ENST00000405675	PLAGL2	Q9UPG8	496 aa		31.83	■■■□□ 2.69
CSNK1E-205	ENST00000405675	LRRC53	A6NM62	1247 aa		31.82	■■■□□ 2.69
CSNK1E-205	ENST00000405675	PLEK	P08567	350 aa	Predicted RBP	31.82	■■■□□ 2.69
CSNK1E-205	ENST00000405675	NPEPPS	P55786	919 aa		31.82	■■■□□ 2.69
CSNK1E-205	ENST00000405675	PCDHA10	Q9Y5I2	948 aa		31.82	■■■□□ 2.69
CSNK1E-205	ENST00000405675	PFAS	O15067	1338 aa		31.82	■■■□□ 2.68
CSNK1E-205	ENST00000405675	SLC16A3	O15427	465 aa	Known RBP	31.82	■■■□□ 2.68
CSNK1E-205	ENST00000405675	SORBS3	O60504	671 aa		31.82	■■■□□ 2.68
CSNK1E-205	ENST00000405675	SLC25A27	O95847	323 aa		31.82	■■■□□ 2.68
CSNK1E-205	ENST00000405675	RDM1	Q8NG50	284 aa		31.82	■■■□□ 2.68
CSNK1E-205	ENST00000405675	MYH11	P35749	1972 aa		31.81	■■■□□ 2.68
CSNK1E-205	ENST00000405675	SPATA31C2	B4DYI2	1134 aa		31.81	■■■□□ 2.68
CSNK1E-205	ENST00000405675	URI1	O94763	535 aa	Predicted RBP	31.81	■■■□□ 2.68
CSNK1E-205	ENST00000405675	ARHGAP29	Q52LW3	1261 aa		31.81	■■■□□ 2.68
CSNK1E-205	ENST00000405675	PDXDC1	Q6P996	788 aa		31.81	■■■□□ 2.68
CSNK1E-205	ENST00000405675	LRRN4CL	Q8ND94	238 aa		31.81	■■■□□ 2.68
CSNK1E-205	ENST00000405675	PCDHB13	Q9Y5F0	798 aa		31.81	■■■□□ 2.68
CSNK1E-205	ENST00000405675	SLU7	O95391	586 aa	Known RBP	31.81	■■■□□ 2.68
CSNK1E-205	ENST00000405675	NFIL3	Q16649	462 aa		31.81	■■■□□ 2.68
CSNK1E-205	ENST00000405675	STXBP4	Q6ZWJ1	553 aa		31.81	■■■□□ 2.68
CSNK1E-205	ENST00000405675	ANKRD23	Q86SG2	305 aa		31.81	■■■□□ 2.68
CSNK1E-205	ENST00000405675	GPRC5C	Q9NQ84	441 aa		31.81	■■■□□ 2.68
CSNK1E-205	ENST00000405675	SLC45A1	Q9Y2W3	748 aa		31.81	■■■□□ 2.68
CSNK1E-205	ENST00000405675	EPB41	P11171	864 aa	Known RBP	31.8	■■■□□ 2.68
CSNK1E-205	ENST00000405675	ERVK-9	P63128	1117 aa		31.8	■■■□□ 2.68
CSNK1E-205	ENST00000405675	XKR9	Q5GH70	373 aa		31.8	■■■□□ 2.68
CSNK1E-205	ENST00000405675	ANO5	Q75V66	913 aa		31.8	■■■□□ 2.68
CSNK1E-205	ENST00000405675	BORCS6	Q96GS4	357 aa		31.8	■■■□□ 2.68
CSNK1E-205	ENST00000405675	CCDC43	Q96MW1	224 aa	Known RBP	31.8	■■■□□ 2.68
CSNK1E-205	ENST00000405675	PTPN18	Q99952	460 aa		31.8	■■■□□ 2.68
CSNK1E-205	ENST00000405675	EDEM3	Q9BZQ6	932 aa		31.8	■■■□□ 2.68
CSNK1E-205	ENST00000405675	NLRC4	Q9NPP4	1024 aa		31.8	■■■□□ 2.68
CSNK1E-205	ENST00000405675	ARHGAP20	Q9P2F6	1191 aa		31.8	■■■□□ 2.68
CSNK1E-205	ENST00000405675	GABBR1	Q9UBS5	961 aa		31.8	■■■□□ 2.68
CSNK1E-205	ENST00000405675	TFR2	Q9UP52	801 aa		31.8	■■■□□ 2.68
CSNK1E-205	ENST00000405675		K7ENM7	598 aa		31.79	■■■□□ 2.68
CSNK1E-205	ENST00000405675	KIF5C	O60282	957 aa		31.79	■■■□□ 2.68
CSNK1E-205	ENST00000405675	SP4	Q02446	784 aa		31.79	■■■□□ 2.68
CSNK1E-205	ENST00000405675	NCBP1	Q09161	790 aa	Known RBP	31.79	■■■□□ 2.68
CSNK1E-205	ENST00000405675	JPH1	Q9HDC5	661 aa	Predicted RBP	31.79	■■■□□ 2.68
CSNK1E-205	ENST00000405675	AGPAT3	Q9NRZ7	376 aa		31.79	■■■□□ 2.68
CSNK1E-205	ENST00000405675	ANKEF1	Q9NU02	776 aa		31.79	■■■□□ 2.68
CSNK1E-205	ENST00000405675	TRIM10	Q9UDY6	481 aa		31.79	■■■□□ 2.68
CSNK1E-205	ENST00000405675	TRPM7	Q96QT4	1865 aa		31.79	■■■□□ 2.68
CSNK1E-205	ENST00000405675	NFASC	O94856	1347 aa		31.79	■■■□□ 2.68
CSNK1E-205	ENST00000405675	ZNF862	O60290	1169 aa		31.79	■■■□□ 2.68
CSNK1E-205	ENST00000405675	STAM2	O75886	525 aa		31.79	■■■□□ 2.68
CSNK1E-205	ENST00000405675	SP2	Q02086	613 aa		31.79	■■■□□ 2.68
CSNK1E-205	ENST00000405675	CCDC170	Q8IYT3	715 aa		31.79	■■■□□ 2.68
CSNK1E-205	ENST00000405675	IWS1	Q96ST2	819 aa		31.79	■■■□□ 2.68
CSNK1E-205	ENST00000405675	CEP72	Q9P209	647 aa		31.79	■■■□□ 2.68
CSNK1E-205	ENST00000405675	DOCK5	Q9H7D0	1870 aa		31.79	■■■□□ 2.68
CSNK1E-205	ENST00000405675	STBD1	O95210	358 aa		31.78	■■■□□ 2.68
CSNK1E-205	ENST00000405675	AFP	P02771	609 aa	Known RBP	31.78	■■■□□ 2.68
CSNK1E-205	ENST00000405675	XRCC5	P13010	732 aa	Known RBP	31.78	■■■□□ 2.68
CSNK1E-205	ENST00000405675	PLS3	P13797	630 aa		31.78	■■■□□ 2.68
CSNK1E-205	ENST00000405675	CYLC1	P35663	651 aa	Predicted RBP	31.78	■■■□□ 2.68
CSNK1E-205	ENST00000405675	DCAF17	Q5H9S7	520 aa	Predicted RBP	31.78	■■■□□ 2.68
CSNK1E-205	ENST00000405675	ZNF569	Q5MCW4	686 aa		31.78	■■■□□ 2.68
CSNK1E-205	ENST00000405675	CACNA2D4	Q7Z3S7	1137 aa		31.78	■■■□□ 2.68
CSNK1E-205	ENST00000405675	DNER	Q8NFT8	737 aa		31.78	■■■□□ 2.68
CSNK1E-205	ENST00000405675	CDHR1	Q96JP9	859 aa		31.78	■■■□□ 2.68
CSNK1E-205	ENST00000405675	GBP3	Q9H0R5	595 aa		31.78	■■■□□ 2.68
CSNK1E-205	ENST00000405675	METTL14	Q9HCE5	456 aa	Known RBP	31.78	■■■□□ 2.68
CSNK1E-205	ENST00000405675	LARS	Q9P2J5	1176 aa	Known RBP	31.78	■■■□□ 2.68
CSNK1E-205	ENST00000405675	POTEB2	H3BUK9	544 aa		31.78	■■■□□ 2.68
CSNK1E-205	ENST00000405675	GNPTAB	Q3T906	1256 aa		31.78	■■■□□ 2.68
CSNK1E-205	ENST00000405675	DPY19L2P1	Q6NXN4	242 aa		31.78	■■■□□ 2.68
CSNK1E-205	ENST00000405675	SMAP1	Q8IYB5	467 aa	Predicted RBP	31.78	■■■□□ 2.68
CSNK1E-205	ENST00000405675	SLC35C1	Q96A29	364 aa		31.78	■■■□□ 2.68
CSNK1E-205	ENST00000405675	DMAC2	Q9NW81	257 aa		31.78	■■■□□ 2.68
CSNK1E-205	ENST00000405675	SLC9A2	Q9UBY0	812 aa		31.78	■■■□□ 2.68
CSNK1E-205	ENST00000405675	EIF3CL	B5ME19	914 aa	Known RBP	31.77	■■■□□ 2.68
CSNK1E-205	ENST00000405675	ZNF157	P51786	506 aa	Predicted RBP	31.77	■■■□□ 2.68
CSNK1E-205	ENST00000405675	POLR2F	P61218	127 aa	Known RBP	31.77	■■■□□ 2.68
CSNK1E-205	ENST00000405675	STXBP2	Q15833	593 aa		31.77	■■■□□ 2.68

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms