RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 DGAT1O75907 488 aa24.4■■□□□ 1.5
EPCAM-202ENST00000405271 NPEPPSP55786 919 aa24.4■■□□□ 1.5
EPCAM-202ENST00000405271 MTERF2Q49AM1 385 aa24.4■■□□□ 1.5
EPCAM-202ENST00000405271 TRMT1LQ7Z2T5 733 aaKnown RBP24.4■■□□□ 1.5
EPCAM-202ENST00000405271 CCDC65Q8IXS2 484 aa24.4■■□□□ 1.5
EPCAM-202ENST00000405271 REEP2Q9BRK0 252 aa24.4■■□□□ 1.5
EPCAM-202ENST00000405271 KATNAL1Q9BW62 490 aa24.4■■□□□ 1.5
EPCAM-202ENST00000405271 TRPC6Q9Y210 931 aa24.4■■□□□ 1.5
EPCAM-202ENST00000405271 USO1O60763 962 aaKnown RBP24.39■■□□□ 1.49
EPCAM-202ENST00000405271 RFC5P40937 340 aa24.39■■□□□ 1.49
EPCAM-202ENST00000405271 BEX3Q00994 111 aa24.39■■□□□ 1.49
EPCAM-202ENST00000405271 GIT2Q14161 759 aa24.39■■□□□ 1.49
EPCAM-202ENST00000405271 TARBP2Q15633 366 aaKnown RBP24.39■■□□□ 1.49
EPCAM-202ENST00000405271 STX1AQ16623 288 aa24.39■■□□□ 1.49
EPCAM-202ENST00000405271 GTPBP4Q9BZE4 634 aaKnown RBP24.39■■□□□ 1.49
EPCAM-202ENST00000405271 EXOC1Q9NV70 894 aa24.39■■□□□ 1.49
EPCAM-202ENST00000405271 DNAH12Q6ZR08 3092 aa24.39■■□□□ 1.49
EPCAM-202ENST00000405271 CEP290O15078 2479 aa24.38■■□□□ 1.49
EPCAM-202ENST00000405271 FRMD3A2A2Y4 597 aa24.38■■□□□ 1.49
EPCAM-202ENST00000405271 TBCAO75347 108 aaKnown RBP24.38■■□□□ 1.49
EPCAM-202ENST00000405271 RHOBTB3O94955 611 aa24.38■■□□□ 1.49
EPCAM-202ENST00000405271 PGK1P00558 417 aa24.38■■□□□ 1.49
EPCAM-202ENST00000405271 MYL3P08590 195 aa24.38■■□□□ 1.49
EPCAM-202ENST00000405271 TYRO3Q06418 890 aa24.38■■□□□ 1.49
EPCAM-202ENST00000405271 KMT5BQ4FZB7 885 aa24.38■■□□□ 1.49
EPCAM-202ENST00000405271 EXOC8Q8IYI6 725 aa24.38■■□□□ 1.49
EPCAM-202ENST00000405271 MCPH1Q8NEM0 835 aa24.38■■□□□ 1.49
EPCAM-202ENST00000405271 C11orf49Q9H6J7 331 aa24.38■■□□□ 1.49
EPCAM-202ENST00000405271 ATP6V0A4Q9HBG4 840 aa24.38■■□□□ 1.49
EPCAM-202ENST00000405271 MYADML2A6NDP7 307 aa24.37■■□□□ 1.49
EPCAM-202ENST00000405271 COL6A1P12109 1028 aa24.37■■□□□ 1.49
EPCAM-202ENST00000405271 IDEP14735 1019 aa24.37■■□□□ 1.49
EPCAM-202ENST00000405271 NLRP12P59046 1061 aa24.37■■□□□ 1.49
EPCAM-202ENST00000405271 PURAQ00577 322 aaKnown RBP24.37■■□□□ 1.49
EPCAM-202ENST00000405271 MORC3Q14149 939 aa24.37■■□□□ 1.49
EPCAM-202ENST00000405271 ZNF484Q5JVG2 852 aa24.37■■□□□ 1.49
EPCAM-202ENST00000405271 GNASQ5JWF2 1037 aa24.37■■□□□ 1.49
EPCAM-202ENST00000405271 KLHDC9Q8NEP7 349 aa24.37■■□□□ 1.49
EPCAM-202ENST00000405271 PANK4Q9NVE7 773 aa24.37■■□□□ 1.49
EPCAM-202ENST00000405271 ANO10Q9NW15 660 aa24.37■■□□□ 1.49
EPCAM-202ENST00000405271 NPHP3-ACAD11A0A0J9YXS1 232 aa24.36■■□□□ 1.49
EPCAM-202ENST00000405271 BIN1O00499 593 aa24.36■■□□□ 1.49
EPCAM-202ENST00000405271 GAP43P17677 238 aa24.36■■□□□ 1.49
EPCAM-202ENST00000405271 POLGP54098 1239 aaPredicted RBP24.36■■□□□ 1.49
EPCAM-202ENST00000405271 IRX5P78411 483 aaPredicted RBP24.36■■□□□ 1.49
EPCAM-202ENST00000405271 COASYQ13057 564 aa24.36■■□□□ 1.49
EPCAM-202ENST00000405271 PCSK9Q8NBP7 692 aaKnown RBP24.36■■□□□ 1.49
EPCAM-202ENST00000405271 CEP89Q96ST8 783 aa24.36■■□□□ 1.49
EPCAM-202ENST00000405271 SH2D3AQ9BRG2 576 aa24.36■■□□□ 1.49
EPCAM-202ENST00000405271 RNPEPQ9H4A4 650 aa24.36■■□□□ 1.49
EPCAM-202ENST00000405271 DHX33Q9H6R0 707 aaKnown RBP24.36■■□□□ 1.49
EPCAM-202ENST00000405271 H0YGN5 161 aa24.35■■□□□ 1.49
EPCAM-202ENST00000405271 HAS3O00219 553 aa24.35■■□□□ 1.49
EPCAM-202ENST00000405271 GAS2O43903 313 aaKnown RBP24.35■■□□□ 1.49
EPCAM-202ENST00000405271 EHHADHQ08426 723 aa24.35■■□□□ 1.49
EPCAM-202ENST00000405271 RAD51AP2Q09MP3 1159 aa24.35■■□□□ 1.49
EPCAM-202ENST00000405271 EMC2Q15006 297 aa24.35■■□□□ 1.49
EPCAM-202ENST00000405271 RNF180Q86T96 592 aa24.35■■□□□ 1.49
EPCAM-202ENST00000405271 SLC7A3Q8WY07 619 aa24.35■■□□□ 1.49
EPCAM-202ENST00000405271 KAT2BQ92831 832 aa24.35■■□□□ 1.49
EPCAM-202ENST00000405271 DRC1Q96MC2 740 aa24.35■■□□□ 1.49
EPCAM-202ENST00000405271 JPH2Q9BR39 696 aaPredicted RBP24.35■■□□□ 1.49
EPCAM-202ENST00000405271 MTG1Q9BT17 334 aaPredicted RBP24.35■■□□□ 1.49
EPCAM-202ENST00000405271 COL4A3BPQ9Y5P4 624 aa24.35■■□□□ 1.49
EPCAM-202ENST00000405271 HIP1RO75146 1068 aa24.35■■□□□ 1.49
EPCAM-202ENST00000405271 FAM13AO94988 1023 aa24.35■■□□□ 1.49
EPCAM-202ENST00000405271 PSEN2P49810 448 aa24.35■■□□□ 1.49
EPCAM-202ENST00000405271 ZNF131P52739 623 aa24.35■■□□□ 1.49
EPCAM-202ENST00000405271 CACNB1Q02641 598 aaPredicted RBP24.35■■□□□ 1.49
EPCAM-202ENST00000405271 PSMD2Q13200 908 aa24.35■■□□□ 1.49
EPCAM-202ENST00000405271 MFSD10Q14728 455 aa24.35■■□□□ 1.49
EPCAM-202ENST00000405271 ZNF658Q5TYW1 1059 aaPredicted RBP24.35■■□□□ 1.49
EPCAM-202ENST00000405271 ARRDC4Q8NCT1 418 aa24.35■■□□□ 1.49
EPCAM-202ENST00000405271 TSPY26PQ9H489 355 aa24.35■■□□□ 1.49
EPCAM-202ENST00000405271 PDLIM7Q9NR12 457 aa24.35■■□□□ 1.49
EPCAM-202ENST00000405271 SEL1LQ9UBV2 794 aa24.35■■□□□ 1.49
EPCAM-202ENST00000405271 ZBTB42B2RXF5 422 aa24.34■■□□□ 1.49
EPCAM-202ENST00000405271 DNM1LO00429 736 aa24.34■■□□□ 1.49
EPCAM-202ENST00000405271 EVI5O60447 810 aa24.34■■□□□ 1.49
EPCAM-202ENST00000405271 TBC1D8BQ0IIM8 1120 aa24.34■■□□□ 1.49
EPCAM-202ENST00000405271 MAPK7Q13164 816 aa24.34■■□□□ 1.49
EPCAM-202ENST00000405271 KIAA0753Q2KHM9 967 aa24.34■■□□□ 1.49
EPCAM-202ENST00000405271 PARVGQ9HBI0 331 aa24.34■■□□□ 1.49
EPCAM-202ENST00000405271 MAFO75444 373 aaPredicted RBP24.33■■□□□ 1.49
EPCAM-202ENST00000405271 INSRRP14616 1297 aa24.33■■□□□ 1.49
EPCAM-202ENST00000405271 KIFAP3Q92845 792 aa24.33■■□□□ 1.49
EPCAM-202ENST00000405271 XPNPEP1Q9NQW7 623 aa24.33■■□□□ 1.49
EPCAM-202ENST00000405271 DACH1Q9UI36 760 aa24.33■■□□□ 1.49
EPCAM-202ENST00000405271 NR2E3Q9Y5X4 410 aa24.33■■□□□ 1.49
EPCAM-202ENST00000405271 RANBP2P49792 3224 aaKnown RBP24.32■■□□□ 1.48
EPCAM-202ENST00000405271 RSPH10B2B2RC85 870 aa24.32■■□□□ 1.48
EPCAM-202ENST00000405271 RSPH10BP0C881 870 aa24.32■■□□□ 1.48
EPCAM-202ENST00000405271 PPFIA1Q13136 1202 aa24.32■■□□□ 1.48
EPCAM-202ENST00000405271 DPCR1Q3MIW9 517 aa24.32■■□□□ 1.48
EPCAM-202ENST00000405271 FAM26FQ5R3K3 315 aa24.32■■□□□ 1.48
EPCAM-202ENST00000405271 ISM2Q6H9L7 571 aa24.32■■□□□ 1.48
EPCAM-202ENST00000405271 CCSAPQ6IQ19 270 aaPredicted RBP24.32■■□□□ 1.48
EPCAM-202ENST00000405271 MLKLQ8NB16 471 aa24.32■■□□□ 1.48
EPCAM-202ENST00000405271 TSEN34Q9BSV6 310 aaKnown RBP24.32■■□□□ 1.48
EPCAM-202ENST00000405271 ZHX3Q9H4I2 956 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms