RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 MTRQ99707 1265 aa13.7□□□□□ -0.22
LINC00339-201ENST00000404210 SH2D3AQ9BRG2 576 aa13.7□□□□□ -0.22
LINC00339-201ENST00000404210 TIPINQ9BVW5 301 aa13.7□□□□□ -0.22
LINC00339-201ENST00000404210 SETD4Q9NVD3 440 aa13.7□□□□□ -0.22
LINC00339-201ENST00000404210 GTF2IRD1Q9UHL9 959 aa13.7□□□□□ -0.22
LINC00339-201ENST00000404210 HOOK1Q9UJC3 728 aaKnown RBP13.7□□□□□ -0.22
LINC00339-201ENST00000404210 MBLAC1A4D2B0 266 aaPredicted RBP13.69□□□□□ -0.22
LINC00339-201ENST00000404210 MYMKA6NI61 221 aa13.69□□□□□ -0.22
LINC00339-201ENST00000404210 ARVCFO00192 962 aa13.69□□□□□ -0.22
LINC00339-201ENST00000404210 GAS2O43903 313 aaKnown RBP13.69□□□□□ -0.22
LINC00339-201ENST00000404210 COL6A1P12109 1028 aa13.69□□□□□ -0.22
LINC00339-201ENST00000404210 GUCY2CP25092 1073 aa13.69□□□□□ -0.22
LINC00339-201ENST00000404210 AFMP43652 599 aa13.69□□□□□ -0.22
LINC00339-201ENST00000404210 CDK7P50613 346 aa13.69□□□□□ -0.22
LINC00339-201ENST00000404210 TBC1D8BQ0IIM8 1120 aa13.69□□□□□ -0.22
LINC00339-201ENST00000404210 KLHL40Q2TBA0 621 aa13.69□□□□□ -0.22
LINC00339-201ENST00000404210 MARCH8Q5T0T0 291 aa13.69□□□□□ -0.22
LINC00339-201ENST00000404210 MTHFD1LQ6UB35 978 aa13.69□□□□□ -0.22
LINC00339-201ENST00000404210 GPBP1Q86WP2 473 aa13.69□□□□□ -0.22
LINC00339-201ENST00000404210 STAMQ92783 540 aa13.69□□□□□ -0.22
LINC00339-201ENST00000404210 SENP6Q9GZR1 1112 aaPredicted RBP13.69□□□□□ -0.22
LINC00339-201ENST00000404210 ARID2Q68CP9 1835 aa13.69□□□□□ -0.22
LINC00339-201ENST00000404210 EVPLQ92817 2033 aa13.68□□□□□ -0.22
LINC00339-201ENST00000404210 GTPBP6O43824 516 aaPredicted RBP13.68□□□□□ -0.22
LINC00339-201ENST00000404210 C22orf31O95567 290 aa13.68□□□□□ -0.22
LINC00339-201ENST00000404210 POLGP54098 1239 aaPredicted RBP13.68□□□□□ -0.22
LINC00339-201ENST00000404210 IGBP1P78318 339 aa13.68□□□□□ -0.22
LINC00339-201ENST00000404210 GIT2Q14161 759 aa13.68□□□□□ -0.22
LINC00339-201ENST00000404210 C1orf53Q5VUE5 145 aa13.68□□□□□ -0.22
LINC00339-201ENST00000404210 IER5Q5VY09 327 aa13.68□□□□□ -0.22
LINC00339-201ENST00000404210 SLC39A5Q6ZMH5 540 aa13.68□□□□□ -0.22
LINC00339-201ENST00000404210 RETREG2Q8NC44 543 aa13.68□□□□□ -0.22
LINC00339-201ENST00000404210 MCPH1Q8NEM0 835 aa13.68□□□□□ -0.22
LINC00339-201ENST00000404210 LMBR1Q8WVP7 490 aa13.68□□□□□ -0.22
LINC00339-201ENST00000404210 TRAPPC12Q8WVT3 735 aa13.68□□□□□ -0.22
LINC00339-201ENST00000404210 TCP11Q8WWU5 503 aa13.68□□□□□ -0.22
LINC00339-201ENST00000404210 SLC7A3Q8WY07 619 aa13.68□□□□□ -0.22
LINC00339-201ENST00000404210 DDX12PQ92771 950 aa13.68□□□□□ -0.22
LINC00339-201ENST00000404210 RUSC1Q9BVN2 902 aa13.68□□□□□ -0.22
LINC00339-201ENST00000404210 TRIM9Q9C026 710 aa13.68□□□□□ -0.22
LINC00339-201ENST00000404210 CLSTN2Q9H4D0 955 aa13.68□□□□□ -0.22
LINC00339-201ENST00000404210 C11orf49Q9H6J7 331 aa13.68□□□□□ -0.22
LINC00339-201ENST00000404210 ATP6V0A4Q9HBG4 840 aa13.68□□□□□ -0.22
LINC00339-201ENST00000404210 PCDHA2Q9Y5H9 948 aa13.68□□□□□ -0.22
LINC00339-201ENST00000404210 TRIP12Q14669 1992 aaPredicted RBP13.68□□□□□ -0.22
LINC00339-201ENST00000404210 SMIM35A0A1B0GVV1 85 aa13.67□□□□□ -0.22
LINC00339-201ENST00000404210 PVALEFA0A1B0GWK0 134 aa13.67□□□□□ -0.22
LINC00339-201ENST00000404210 TRAK2O60296 914 aa13.67□□□□□ -0.22
LINC00339-201ENST00000404210 USO1O60763 962 aaKnown RBP13.67□□□□□ -0.22
LINC00339-201ENST00000404210 KRT18P05783 430 aaKnown RBP13.67□□□□□ -0.22
LINC00339-201ENST00000404210 EN2P19622 333 aaPredicted RBP13.67□□□□□ -0.22
LINC00339-201ENST00000404210 TMOD1P28289 359 aa13.67□□□□□ -0.22
LINC00339-201ENST00000404210 DNM2P50570 870 aa13.67□□□□□ -0.22
LINC00339-201ENST00000404210 DPYDQ12882 1025 aa13.67□□□□□ -0.22
LINC00339-201ENST00000404210 HIC1Q14526 733 aa13.67□□□□□ -0.22
LINC00339-201ENST00000404210 POSTNQ15063 836 aa13.67□□□□□ -0.22
LINC00339-201ENST00000404210 FAM47CQ5HY64 1035 aa13.67□□□□□ -0.22
LINC00339-201ENST00000404210 GDF6Q6KF10 455 aaPredicted RBP13.67□□□□□ -0.22
LINC00339-201ENST00000404210 EFCAB12Q6NXP0 572 aa13.67□□□□□ -0.22
LINC00339-201ENST00000404210 NECAB2Q7Z6G3 386 aa13.67□□□□□ -0.22
LINC00339-201ENST00000404210 LINC01465Q8N7H1 131 aa13.67□□□□□ -0.22
LINC00339-201ENST00000404210 DNAJC19Q96DA6 116 aa13.67□□□□□ -0.22
LINC00339-201ENST00000404210 ABHD8Q96I13 439 aa13.67□□□□□ -0.22
LINC00339-201ENST00000404210 PAWRQ96IZ0 340 aaKnown RBP13.67□□□□□ -0.22
LINC00339-201ENST00000404210 XPNPEP1Q9NQW7 623 aa13.67□□□□□ -0.22
LINC00339-201ENST00000404210 KCNG1Q9UIX4 513 aa13.67□□□□□ -0.22
LINC00339-201ENST00000404210 TUBE1Q9UJT0 475 aa13.67□□□□□ -0.22
LINC00339-201ENST00000404210 ODF2LQ9ULJ1 636 aa13.67□□□□□ -0.22
LINC00339-201ENST00000404210 ASAP2O43150 1006 aa13.66□□□□□ -0.22
LINC00339-201ENST00000404210 TREHO43280 583 aa13.66□□□□□ -0.22
LINC00339-201ENST00000404210 RPLP2P05387 115 aaKnown RBP13.66□□□□□ -0.22
LINC00339-201ENST00000404210 CYP2C9P11712 490 aa13.66□□□□□ -0.22
LINC00339-201ENST00000404210 ARL2P36404 184 aa13.66□□□□□ -0.22
LINC00339-201ENST00000404210 RTP1P59025 263 aa13.66□□□□□ -0.22
LINC00339-201ENST00000404210 ZNF200P98182 395 aaPredicted RBP13.66□□□□□ -0.22
LINC00339-201ENST00000404210 CDC42EP1Q00587 391 aa13.66□□□□□ -0.22
LINC00339-201ENST00000404210 CUL4BQ13620 913 aa13.66□□□□□ -0.22
LINC00339-201ENST00000404210 EMC2Q15006 297 aa13.66□□□□□ -0.22
LINC00339-201ENST00000404210 SNX17Q15036 470 aa13.66□□□□□ -0.22
LINC00339-201ENST00000404210 DYMQ7RTS9 669 aa13.66□□□□□ -0.22
LINC00339-201ENST00000404210 GRAMD1CQ8IYS0 662 aa13.66□□□□□ -0.22
LINC00339-201ENST00000404210 NME8Q8N427 588 aa13.66□□□□□ -0.22
LINC00339-201ENST00000404210 DIS3LQ8TF46 1054 aaKnown RBP13.66□□□□□ -0.22
LINC00339-201ENST00000404210 PPP1R13LQ8WUF5 828 aa13.66□□□□□ -0.22
LINC00339-201ENST00000404210 KIFAP3Q92845 792 aa13.66□□□□□ -0.22
LINC00339-201ENST00000404210 SYAP1Q96A49 352 aaPredicted RBP13.66□□□□□ -0.22
LINC00339-201ENST00000404210 NUP62CLQ9H1M0 184 aa13.66□□□□□ -0.22
LINC00339-201ENST00000404210 SUGCTQ9HAC7 445 aa13.66□□□□□ -0.22
LINC00339-201ENST00000404210 C17orf75Q9HAS0 396 aa13.66□□□□□ -0.22
LINC00339-201ENST00000404210 KIAA0100Q14667 2235 aaKnown RBP13.66□□□□□ -0.22
LINC00339-201ENST00000404210 MROH7Q68CQ1 1323 aa13.65□□□□□ -0.22
LINC00339-201ENST00000404210 NPHP3-ACAD11A0A0J9YXS1 232 aa13.65□□□□□ -0.22
LINC00339-201ENST00000404210 FRMD3A2A2Y4 597 aa13.65□□□□□ -0.22
LINC00339-201ENST00000404210 HIP1RO75146 1068 aa13.65□□□□□ -0.22
LINC00339-201ENST00000404210 SMC2O95347 1197 aa13.65□□□□□ -0.22
LINC00339-201ENST00000404210 PRR29P0C7W0 189 aa13.65□□□□□ -0.22
LINC00339-201ENST00000404210 SARSP49591 514 aaKnown RBP13.65□□□□□ -0.22
LINC00339-201ENST00000404210 ZNF131P52739 623 aa13.65□□□□□ -0.22
LINC00339-201ENST00000404210 PTK7Q13308 1070 aa13.65□□□□□ -0.22
LINC00339-201ENST00000404210 MKRN4PQ13434 485 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms