RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 CETN3O15182 167 aa28.24■■■□□ 2.11
CPNE1-205ENST00000401607 FAM110CQ1W6H9 321 aa28.24■■■□□ 2.11
CPNE1-205ENST00000401607 CCDC40Q4G0X9 1142 aa28.24■■■□□ 2.11
CPNE1-205ENST00000401607 XKR3Q5GH77 459 aa28.24■■■□□ 2.11
CPNE1-205ENST00000401607 KCNV1Q6PIU1 500 aa28.24■■■□□ 2.11
CPNE1-205ENST00000401607 STXBP4Q6ZWJ1 553 aa28.24■■■□□ 2.11
CPNE1-205ENST00000401607 PCYT2Q99447 389 aa28.24■■■□□ 2.11
CPNE1-205ENST00000401607 NDST4Q9H3R1 872 aa28.24■■■□□ 2.11
CPNE1-205ENST00000401607 ASB14A6NK59 587 aa28.23■■■□□ 2.11
CPNE1-205ENST00000401607 NRDCO43847 1150 aa28.23■■■□□ 2.11
CPNE1-205ENST00000401607 TRIM14Q14142 442 aa28.23■■■□□ 2.11
CPNE1-205ENST00000401607 PCDHB13Q9Y5F0 798 aa28.23■■■□□ 2.11
CPNE1-205ENST00000401607 K7ENM7 598 aa28.22■■■□□ 2.11
CPNE1-205ENST00000401607 RNF225M0QZC1 329 aaPredicted RBP28.22■■■□□ 2.11
CPNE1-205ENST00000401607 NR3C1P04150 777 aa28.22■■■□□ 2.11
CPNE1-205ENST00000401607 CCDC62Q6P9F0 684 aa28.22■■■□□ 2.11
CPNE1-205ENST00000401607 ARMCX2Q7L311 632 aa28.22■■■□□ 2.11
CPNE1-205ENST00000401607 SAPCD2Q86UD0 394 aa28.22■■■□□ 2.11
CPNE1-205ENST00000401607 PANX2Q96RD6 677 aa28.22■■■□□ 2.11
CPNE1-205ENST00000401607 ERGIC2Q96RQ1 377 aa28.22■■■□□ 2.11
CPNE1-205ENST00000401607 PDLIM7Q9NR12 457 aa28.22■■■□□ 2.11
CPNE1-205ENST00000401607 IGF2BP3O00425 579 aaKnown RBP eCLIP28.22■■■□□ 2.112e-7■■■■□ 20.3
CPNE1-205ENST00000401607 STRNO43815 780 aa28.22■■■□□ 2.11
CPNE1-205ENST00000401607 KCNJ6P48051 423 aa28.22■■■□□ 2.11
CPNE1-205ENST00000401607 SYCP1Q15431 976 aa28.22■■■□□ 2.11
CPNE1-205ENST00000401607 FAM102BQ5T8I3 360 aa28.22■■■□□ 2.11
CPNE1-205ENST00000401607 GPR142Q7Z601 462 aa28.22■■■□□ 2.11
CPNE1-205ENST00000401607 TRIM59Q8IWR1 403 aa28.22■■■□□ 2.11
CPNE1-205ENST00000401607 BAG1Q99933 345 aaPredicted RBP28.22■■■□□ 2.11
CPNE1-205ENST00000401607 CYP26B1Q9NR63 512 aa28.22■■■□□ 2.11
CPNE1-205ENST00000401607 PASKQ96RG2 1323 aa28.21■■■□□ 2.11
CPNE1-205ENST00000401607 MYH9P35579 1960 aaKnown RBP28.21■■■□□ 2.11
CPNE1-205ENST00000401607 NFIL3Q16649 462 aa28.21■■■□□ 2.11
CPNE1-205ENST00000401607 CELF3Q5SZQ8 465 aaKnown RBP28.21■■■□□ 2.11
CPNE1-205ENST00000401607 FKBP15Q5T1M5 1219 aa28.21■■■□□ 2.11
CPNE1-205ENST00000401607 ADGRA2Q96PE1 1338 aa28.21■■■□□ 2.11
CPNE1-205ENST00000401607 MLXIPQ9HAP2 919 aa28.21■■■□□ 2.11
CPNE1-205ENST00000401607 IVNS1ABPQ9Y6Y0 642 aa28.21■■■□□ 2.11
CPNE1-205ENST00000401607 RASSF10A6NK89 507 aa28.2■■■□□ 2.11
CPNE1-205ENST00000401607 OATP04181 439 aa28.2■■■□□ 2.11
CPNE1-205ENST00000401607 KLK7P49862 253 aa28.2■■■□□ 2.11
CPNE1-205ENST00000401607 RGMBQ6NW40 437 aa28.2■■■□□ 2.11
CPNE1-205ENST00000401607 CNGA4Q8IV77 575 aa28.2■■■□□ 2.11
CPNE1-205ENST00000401607 SEPT1Q8WYJ6 367 aa28.2■■■□□ 2.11
CPNE1-205ENST00000401607 XPNPEP1Q9NQW7 623 aa28.2■■■□□ 2.11
CPNE1-205ENST00000401607 PDGFCQ9NRA1 345 aa28.2■■■□□ 2.11
CPNE1-205ENST00000401607 MANSC4A6NHS7 340 aaPredicted RBP28.19■■■□□ 2.1
CPNE1-205ENST00000401607 CLIC2O15247 247 aa28.19■■■□□ 2.1
CPNE1-205ENST00000401607 DGAT1O75907 488 aa28.19■■■□□ 2.1
CPNE1-205ENST00000401607 TPM1P09493 284 aa28.19■■■□□ 2.1
CPNE1-205ENST00000401607 NCKAP1LP55160 1127 aa28.19■■■□□ 2.1
CPNE1-205ENST00000401607 ALCAMQ13740 583 aa28.19■■■□□ 2.1
CPNE1-205ENST00000401607 GRB14Q14449 540 aa28.19■■■□□ 2.1
CPNE1-205ENST00000401607 E4F1Q66K89 784 aaPredicted RBP28.19■■■□□ 2.1
CPNE1-205ENST00000401607 TTYH3Q9C0H2 523 aa28.19■■■□□ 2.1
CPNE1-205ENST00000401607 ST6GALNAC4Q9H4F1 302 aa28.19■■■□□ 2.1
CPNE1-205ENST00000401607 KCND1Q9NSA2 647 aa28.19■■■□□ 2.1
CPNE1-205ENST00000401607 USP27XA6NNY8 438 aa28.19■■■□□ 2.1
CPNE1-205ENST00000401607 STX10O60499 249 aa28.19■■■□□ 2.1
CPNE1-205ENST00000401607 RPL13P26373 211 aaKnown RBP28.19■■■□□ 2.1
CPNE1-205ENST00000401607 TCF7P36402 384 aaPredicted RBP28.19■■■□□ 2.1
CPNE1-205ENST00000401607 PEX3P56589 373 aa28.19■■■□□ 2.1
CPNE1-205ENST00000401607 MTERF2Q49AM1 385 aa28.19■■■□□ 2.1
CPNE1-205ENST00000401607 TMEM63BQ5T3F8 832 aa28.19■■■□□ 2.1
CPNE1-205ENST00000401607 AFAP1L1Q8TED9 768 aa28.19■■■□□ 2.1
CPNE1-205ENST00000401607 CCDC51Q96ER9 411 aa28.19■■■□□ 2.1
CPNE1-205ENST00000401607 GPR20Q99678 358 aa28.19■■■□□ 2.1
CPNE1-205ENST00000401607 AKAP3O75969 853 aa28.18■■■□□ 2.1
CPNE1-205ENST00000401607 SOX10P56693 466 aa28.18■■■□□ 2.1
CPNE1-205ENST00000401607 ZNF467Q7Z7K2 595 aaPredicted RBP28.18■■■□□ 2.1
CPNE1-205ENST00000401607 GBP3Q9H0R5 595 aa28.18■■■□□ 2.1
CPNE1-205ENST00000401607 SIK3Q9Y2K2 1263 aa28.18■■■□□ 2.1
CPNE1-205ENST00000401607 TTC26A0AVF1 554 aa28.17■■■□□ 2.1
CPNE1-205ENST00000401607 ARHGAP6O43182 974 aa28.17■■■□□ 2.1
CPNE1-205ENST00000401607 FECHP22830 423 aa28.17■■■□□ 2.1
CPNE1-205ENST00000401607 GTF2BQ00403 316 aa28.17■■■□□ 2.1
CPNE1-205ENST00000401607 HSDL1Q3SXM5 330 aa28.17■■■□□ 2.1
CPNE1-205ENST00000401607 HAUS6Q7Z4H7 955 aa28.17■■■□□ 2.1
CPNE1-205ENST00000401607 FRMD5Q7Z6J6 570 aa28.17■■■□□ 2.1
CPNE1-205ENST00000401607 CCAR2Q8N163 923 aaKnown RBP28.17■■■□□ 2.1
CPNE1-205ENST00000401607 MCPH1Q8NEM0 835 aa28.17■■■□□ 2.1
CPNE1-205ENST00000401607 BSNDQ8WZ55 320 aa28.17■■■□□ 2.1
CPNE1-205ENST00000401607 KIFAP3Q92845 792 aa28.17■■■□□ 2.1
CPNE1-205ENST00000401607 COPS5Q92905 334 aa28.17■■■□□ 2.1
CPNE1-205ENST00000401607 ATP6V0A4Q9HBG4 840 aa28.17■■■□□ 2.1
CPNE1-205ENST00000401607 AGPAT3Q9NRZ7 376 aa28.17■■■□□ 2.1
CPNE1-205ENST00000401607 CPA4Q9UI42 421 aa28.17■■■□□ 2.1
CPNE1-205ENST00000401607 SLC16A3O15427 465 aaKnown RBP28.16■■■□□ 2.1
CPNE1-205ENST00000401607 SLC10A3P09131 477 aa28.16■■■□□ 2.1
CPNE1-205ENST00000401607 TXNP10599 105 aaKnown RBP28.16■■■□□ 2.1
CPNE1-205ENST00000401607 MAPK4P31152 587 aa28.16■■■□□ 2.1
CPNE1-205ENST00000401607 CASP4P49662 377 aa28.16■■■□□ 2.1
CPNE1-205ENST00000401607 STAT5BP51692 787 aa28.16■■■□□ 2.1
CPNE1-205ENST00000401607 FAM160B1Q5W0V3 765 aa28.16■■■□□ 2.1
CPNE1-205ENST00000401607 PLEKHH3Q7Z736 793 aa28.16■■■□□ 2.1
CPNE1-205ENST00000401607 CEP89Q96ST8 783 aa28.16■■■□□ 2.1
CPNE1-205ENST00000401607 NIFKQ9BYG3 293 aaKnown RBP28.16■■■□□ 2.1
CPNE1-205ENST00000401607 ZCCHC17Q9NP64 241 aaKnown RBP28.16■■■□□ 2.1
CPNE1-205ENST00000401607 ABHD10Q9NUJ1 306 aa28.16■■■□□ 2.1
CPNE1-205ENST00000401607 CAPN11Q9UMQ6 739 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms