RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 PGRMC1O00264 195 aaKnown RBP27.9■■■□□ 2.06
COL13A1-203ENST00000398969 CLIC2O15247 247 aa27.9■■■□□ 2.06
COL13A1-203ENST00000398969 GJB7Q6PEY0 223 aa27.9■■■□□ 2.06
COL13A1-203ENST00000398969 SLFN11Q7Z7L1 901 aa27.9■■■□□ 2.06
COL13A1-203ENST00000398969 VPS36Q86VN1 386 aa27.9■■■□□ 2.06
COL13A1-203ENST00000398969 SLC16A10Q8TF71 515 aa27.9■■■□□ 2.06
COL13A1-203ENST00000398969 POLR3CQ9BUI4 534 aaPredicted RBP27.9■■■□□ 2.06
COL13A1-203ENST00000398969 PI4KBQ9UBF8 816 aa27.9■■■□□ 2.06
COL13A1-203ENST00000398969 RABGAP1Q9Y3P9 1069 aa27.9■■■□□ 2.06
COL13A1-203ENST00000398969 YDJCA8MPS7 323 aa27.89■■■□□ 2.06
COL13A1-203ENST00000398969 EYA4O95677 639 aa27.89■■■□□ 2.06
COL13A1-203ENST00000398969 CUL1Q13616 776 aa27.89■■■□□ 2.06
COL13A1-203ENST00000398969 TADA2BQ86TJ2 420 aa27.89■■■□□ 2.06
COL13A1-203ENST00000398969 ATP6V1G3Q96LB4 118 aa27.89■■■□□ 2.06
COL13A1-203ENST00000398969 EIF2AK1Q9BQI3 630 aaKnown RBP27.89■■■□□ 2.06
COL13A1-203ENST00000398969 PLAAQ9Y263 795 aa27.89■■■□□ 2.06
COL13A1-203ENST00000398969 NOC2LQ9Y3T9 749 aaKnown RBP27.89■■■□□ 2.06
COL13A1-203ENST00000398969 GTPBP10A4D1E9 387 aaKnown RBP27.89■■■□□ 2.05
COL13A1-203ENST00000398969 H2AFZP0C0S5 128 aa27.89■■■□□ 2.05
COL13A1-203ENST00000398969 TAL1P17542 331 aaPredicted RBP27.89■■■□□ 2.05
COL13A1-203ENST00000398969 HLTFQ14527 1009 aaKnown RBP eCLIP27.89■■■□□ 2.05
COL13A1-203ENST00000398969 GRIPAP1Q4V328 841 aa27.89■■■□□ 2.05
COL13A1-203ENST00000398969 H2AFVQ71UI9 128 aa27.89■■■□□ 2.05
COL13A1-203ENST00000398969 CYP2W1Q8TAV3 490 aa27.89■■■□□ 2.05
COL13A1-203ENST00000398969 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.89■■■□□ 2.05
COL13A1-203ENST00000398969 AP1M1Q9BXS5 423 aa27.89■■■□□ 2.05
COL13A1-203ENST00000398969 OLFML3Q9NRN5 406 aa27.89■■■□□ 2.05
COL13A1-203ENST00000398969 STXBP5LQ9Y2K9 1186 aa27.89■■■□□ 2.05
COL13A1-203ENST00000398969 PCDHB13Q9Y5F0 798 aa27.89■■■□□ 2.05
COL13A1-203ENST00000398969 A0A0A6YYK5 440 aaPredicted RBP27.88■■■□□ 2.05
COL13A1-203ENST00000398969 BHMG1C9JSJ3 638 aaPredicted RBP27.88■■■□□ 2.05
COL13A1-203ENST00000398969 DDX3XO00571 662 aaKnown RBP eCLIP27.88■■■□□ 2.05
COL13A1-203ENST00000398969 TGFB1I1O43294 461 aa27.88■■■□□ 2.05
COL13A1-203ENST00000398969 CPP00450 1065 aa27.88■■■□□ 2.05
COL13A1-203ENST00000398969 NR1D1P20393 614 aa27.88■■■□□ 2.05
COL13A1-203ENST00000398969 TATDN1Q6P1N9 297 aa27.88■■■□□ 2.05
COL13A1-203ENST00000398969 SH3BP5LQ7L8J4 393 aa27.88■■■□□ 2.05
COL13A1-203ENST00000398969 PEX26Q7Z412 305 aa27.88■■■□□ 2.05
COL13A1-203ENST00000398969 GMCL1P1Q8NEA9 526 aa27.88■■■□□ 2.05
COL13A1-203ENST00000398969 BORCS6Q96GS4 357 aa27.88■■■□□ 2.05
COL13A1-203ENST00000398969 IDI2Q9BXS1 227 aa27.88■■■□□ 2.05
COL13A1-203ENST00000398969 FAM198AQ9UFP1 575 aa27.88■■■□□ 2.05
COL13A1-203ENST00000398969 EML1O00423 815 aa27.88■■■□□ 2.05
COL13A1-203ENST00000398969 OPLAHO14841 1288 aa27.88■■■□□ 2.05
COL13A1-203ENST00000398969 KCNA3P22001 575 aa27.88■■■□□ 2.05
COL13A1-203ENST00000398969 SYDE2Q5VT97 1194 aa27.88■■■□□ 2.05
COL13A1-203ENST00000398969 RGL1Q9NZL6 768 aa27.88■■■□□ 2.05
COL13A1-203ENST00000398969 INTUQ9ULD6 942 aa27.88■■■□□ 2.05
COL13A1-203ENST00000398969 TMCO5BA8MYB1 307 aa27.87■■■□□ 2.05
COL13A1-203ENST00000398969 NDUFB10O96000 172 aa27.87■■■□□ 2.05
COL13A1-203ENST00000398969 HOXA13P31271 388 aaPredicted RBP27.87■■■□□ 2.05
COL13A1-203ENST00000398969 TMEM179Q6ZVK1 233 aa27.87■■■□□ 2.05
COL13A1-203ENST00000398969 LMBR1Q8WVP7 490 aa27.87■■■□□ 2.05
COL13A1-203ENST00000398969 GMCL1Q96IK5 515 aa27.87■■■□□ 2.05
COL13A1-203ENST00000398969 SUCLA2Q9P2R7 463 aaPredicted RBP27.87■■■□□ 2.05
COL13A1-203ENST00000398969 ZMYM2Q9UBW7 1377 aa27.87■■■□□ 2.05
COL13A1-203ENST00000398969 HMGB1P1B2RPK0 211 aaPredicted RBP27.87■■■□□ 2.05
COL13A1-203ENST00000398969 NDUFAB1O14561 156 aa27.87■■■□□ 2.05
COL13A1-203ENST00000398969 SART1O43290 800 aaKnown RBP27.87■■■□□ 2.05
COL13A1-203ENST00000398969 DPEP1P16444 411 aa27.87■■■□□ 2.05
COL13A1-203ENST00000398969 FERP16591 822 aa27.87■■■□□ 2.05
COL13A1-203ENST00000398969 GAP43P17677 238 aa27.87■■■□□ 2.05
COL13A1-203ENST00000398969 IKQ13123 557 aaPredicted RBP27.87■■■□□ 2.05
COL13A1-203ENST00000398969 RINT1Q6NUQ1 792 aa27.87■■■□□ 2.05
COL13A1-203ENST00000398969 MAATS1Q7Z4T9 603 aa27.87■■■□□ 2.05
COL13A1-203ENST00000398969 RTKN2Q8IZC4 609 aa27.87■■■□□ 2.05
COL13A1-203ENST00000398969 SAMM50Q9Y512 469 aa27.87■■■□□ 2.05
COL13A1-203ENST00000398969 SFI1A8K8P3 1242 aa27.86■■■□□ 2.05
COL13A1-203ENST00000398969 VGLL3A8MV65 326 aa27.86■■■□□ 2.05
COL13A1-203ENST00000398969 POLD1P28340 1107 aa27.86■■■□□ 2.05
COL13A1-203ENST00000398969 CEP85LQ5SZL2 805 aa27.86■■■□□ 2.05
COL13A1-203ENST00000398969 RASGEF1CQ8N431 466 aa27.86■■■□□ 2.05
COL13A1-203ENST00000398969 U2AF1L4Q8WU68 220 aaKnown RBP27.86■■■□□ 2.05
COL13A1-203ENST00000398969 CCDC188H7C350 402 aa27.85■■■□□ 2.05
COL13A1-203ENST00000398969 ZEB2O60315 1214 aa27.85■■■□□ 2.05
COL13A1-203ENST00000398969 GFPT2O94808 682 aa27.85■■■□□ 2.05
COL13A1-203ENST00000398969 GDF11O95390 407 aa27.85■■■□□ 2.05
COL13A1-203ENST00000398969 LSP1P33241 339 aa27.85■■■□□ 2.05
COL13A1-203ENST00000398969 HSD17B3P37058 310 aa27.85■■■□□ 2.05
COL13A1-203ENST00000398969 GUCY1A3Q02108 690 aa27.85■■■□□ 2.05
COL13A1-203ENST00000398969 LRIG3Q6UXM1 1119 aa27.85■■■□□ 2.05
COL13A1-203ENST00000398969 DDX47Q9H0S4 455 aaKnown RBP27.85■■■□□ 2.05
COL13A1-203ENST00000398969 CYP3A4P08684 503 aa27.85■■■□□ 2.05
COL13A1-203ENST00000398969 NPEPPSP55786 919 aa27.85■■■□□ 2.05
COL13A1-203ENST00000398969 NT5DC3Q86UY8 548 aa27.85■■■□□ 2.05
COL13A1-203ENST00000398969 DDX42Q86XP3 938 aaKnown RBP eCLIP27.85■■■□□ 2.05
COL13A1-203ENST00000398969 SYCE1Q8N0S2 351 aa27.85■■■□□ 2.05
COL13A1-203ENST00000398969 OLIG1Q8TAK6 271 aa27.85■■■□□ 2.05
COL13A1-203ENST00000398969 IKZF4Q9H2S9 585 aa27.85■■■□□ 2.05
COL13A1-203ENST00000398969 KRIT1O00522 736 aa27.84■■■□□ 2.05
COL13A1-203ENST00000398969 EIF3DO15371 548 aaKnown RBP eCLIP27.84■■■□□ 2.05
COL13A1-203ENST00000398969 ZNF76P36508 570 aa27.84■■■□□ 2.05
COL13A1-203ENST00000398969 STAT1P42224 750 aa27.84■■■□□ 2.05
COL13A1-203ENST00000398969 DAAM2Q86T65 1068 aa27.84■■■□□ 2.05
COL13A1-203ENST00000398969 PSMD1Q99460 953 aa27.84■■■□□ 2.05
COL13A1-203ENST00000398969 TMBIM4Q9HC24 238 aa27.84■■■□□ 2.05
COL13A1-203ENST00000398969 NPM3O75607 178 aaKnown RBP27.84■■■□□ 2.05
COL13A1-203ENST00000398969 ITGB3BPQ13352 177 aaPredicted RBP27.84■■■□□ 2.05
COL13A1-203ENST00000398969 FAM186BQ8IYM0 893 aa27.84■■■□□ 2.05
COL13A1-203ENST00000398969 KCTD17Q8N5Z5 321 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms