RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 PASD1Q8IV76 773 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 SH3GLB2Q9NR46 395 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 ASAP1Q9ULH1 1129 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 BCS1LQ9Y276 419 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 WDR17Q8IZU2 1322 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 NPR1P16066 1061 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 OCA2Q04671 838 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 NAA30Q147X3 362 aaPredicted RBP12.62□□□□□ -0.39
TMF1-201ENST00000398559 ACAD11Q709F0 780 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 SULF1Q8IWU6 871 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 LRRC37BQ96QE4 947 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 KIFC3Q9BVG8 833 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 L3MBTL1Q9Y468 752 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 MRFAP1Q9Y605 127 aa12.62□□□□□ -0.39
TMF1-201ENST00000398559 ADAMTS12P58397 1594 aa12.61□□□□□ -0.39
TMF1-201ENST00000398559 HAUS5O94927 633 aa12.61□□□□□ -0.39
TMF1-201ENST00000398559 ARPP19P56211 112 aa12.61□□□□□ -0.39
TMF1-201ENST00000398559 GPC5P78333 572 aa12.61□□□□□ -0.39
TMF1-201ENST00000398559 ABI1Q8IZP0 508 aa12.61□□□□□ -0.39
TMF1-201ENST00000398559 WARS2Q9UGM6 360 aaKnown RBP12.61□□□□□ -0.39
TMF1-201ENST00000398559 ESYT3A0FGR9 886 aa12.61□□□□□ -0.39
TMF1-201ENST00000398559 HNRNPCL2B2RXH8 293 aa12.61□□□□□ -0.39
TMF1-201ENST00000398559 HNRNPCL1O60812 293 aaKnown RBP12.61□□□□□ -0.39
TMF1-201ENST00000398559 NSUN2Q08J23 767 aaKnown RBP eCLIP12.61□□□□□ -0.39
TMF1-201ENST00000398559 SURF1Q15526 300 aa12.61□□□□□ -0.39
TMF1-201ENST00000398559 BZW1Q7L1Q6 419 aaKnown RBP12.61□□□□□ -0.39
TMF1-201ENST00000398559 DHX40Q8IX18 779 aaKnown RBP12.61□□□□□ -0.39
TMF1-201ENST00000398559 PIGOQ8TEQ8 1089 aa12.61□□□□□ -0.39
TMF1-201ENST00000398559 ZCCHC17Q9NP64 241 aaKnown RBP12.61□□□□□ -0.39
TMF1-201ENST00000398559 GTSE1Q9NYZ3 720 aa12.61□□□□□ -0.39
TMF1-201ENST00000398559 STOML1Q9UBI4 398 aa12.61□□□□□ -0.39
TMF1-201ENST00000398559 TTC7AQ9ULT0 858 aaPredicted RBP12.61□□□□□ -0.39
TMF1-201ENST00000398559 ANO9A1A5B4 782 aa12.61□□□□□ -0.39
TMF1-201ENST00000398559 SYCE1LA8MT33 242 aa12.61□□□□□ -0.39
TMF1-201ENST00000398559 MIF4GDA9UHW6 222 aaKnown RBP12.61□□□□□ -0.39
TMF1-201ENST00000398559 SASH1O94885 1247 aa12.61□□□□□ -0.39
TMF1-201ENST00000398559 EPHB1P54762 984 aa12.61□□□□□ -0.39
TMF1-201ENST00000398559 AP2B1P63010 937 aa12.61□□□□□ -0.39
TMF1-201ENST00000398559 MECOMQ03112 1051 aa12.61□□□□□ -0.39
TMF1-201ENST00000398559 ZNF211Q13398 564 aaPredicted RBP12.61□□□□□ -0.39
TMF1-201ENST00000398559 ARL13BQ3SXY8 428 aa12.61□□□□□ -0.39
TMF1-201ENST00000398559 RWDD4Q6NW29 188 aaKnown RBP12.61□□□□□ -0.39
TMF1-201ENST00000398559 DCPSQ96C86 337 aaKnown RBP12.61□□□□□ -0.39
TMF1-201ENST00000398559 RBM41Q96IZ5 413 aaKnown RBP12.61□□□□□ -0.39
TMF1-201ENST00000398559 ATG3Q9NT62 314 aa12.61□□□□□ -0.39
TMF1-201ENST00000398559 ADAM22Q9P0K1 906 aa12.61□□□□□ -0.39
TMF1-201ENST00000398559 PAMP19021 973 aa12.61□□□□□ -0.39
TMF1-201ENST00000398559 PPP6R3Q5H9R7 873 aaPredicted RBP12.61□□□□□ -0.39
TMF1-201ENST00000398559 ZMAT2Q96NC0 199 aaKnown RBP12.61□□□□□ -0.39
TMF1-201ENST00000398559 USP14P54578 494 aa12.61□□□□□ -0.39
TMF1-201ENST00000398559 NR1H3Q13133 447 aa12.61□□□□□ -0.39
TMF1-201ENST00000398559 KRT39Q6A163 491 aa12.61□□□□□ -0.39
TMF1-201ENST00000398559 KRT27Q7Z3Y8 459 aa12.61□□□□□ -0.39
TMF1-201ENST00000398559 NGRNQ9NPE2 291 aaKnown RBP12.61□□□□□ -0.39
TMF1-201ENST00000398559 SUN2Q9UH99 717 aa12.61□□□□□ -0.39
TMF1-201ENST00000398559 ATP8B3O60423 1300 aa12.61□□□□□ -0.39
TMF1-201ENST00000398559 CLASP1Q7Z460 1538 aa12.6□□□□□ -0.39
TMF1-201ENST00000398559 LOC102724428A0A0B4J2F2 783 aa12.6□□□□□ -0.39
TMF1-201ENST00000398559 E2F6O75461 281 aa12.6□□□□□ -0.39
TMF1-201ENST00000398559 SIK1P57059 783 aa12.6□□□□□ -0.39
TMF1-201ENST00000398559 CAV1Q03135 178 aa12.6□□□□□ -0.39
TMF1-201ENST00000398559 ZBTB18Q99592 522 aa12.6□□□□□ -0.39
TMF1-201ENST00000398559 ING2Q9H160 280 aa12.6□□□□□ -0.39
TMF1-201ENST00000398559 LRRC14Q15048 493 aa12.6□□□□□ -0.39
TMF1-201ENST00000398559 KLHL38Q2WGJ6 581 aa12.6□□□□□ -0.39
TMF1-201ENST00000398559 ZNF394Q53GI3 561 aa12.6□□□□□ -0.39
TMF1-201ENST00000398559 NBPF10Q6P3W6 841 aaKnown RBP12.6□□□□□ -0.39
TMF1-201ENST00000398559 CDHR1Q96JP9 859 aa12.6□□□□□ -0.39
TMF1-201ENST00000398559 FAM161BQ96MY7 647 aa12.6□□□□□ -0.39
TMF1-201ENST00000398559 TTC25Q96NG3 672 aa12.6□□□□□ -0.39
TMF1-201ENST00000398559 ADD3Q9UEY8 706 aaKnown RBP12.6□□□□□ -0.39
TMF1-201ENST00000398559 ZRANB2O95218 330 aaKnown RBP eCLIP12.6□□□□□ -0.39
TMF1-201ENST00000398559 CDK8P49336 464 aa12.6□□□□□ -0.39
TMF1-201ENST00000398559 HACD3Q9P035 362 aa12.6□□□□□ -0.39
TMF1-201ENST00000398559 KDM5CP41229 1560 aa12.6□□□□□ -0.39
TMF1-201ENST00000398559 COPS2P61201 443 aa12.6□□□□□ -0.39
TMF1-201ENST00000398559 EP400NLQ6ZTU2 488 aa12.6□□□□□ -0.39
TMF1-201ENST00000398559 EEPD1Q7L9B9 569 aa12.6□□□□□ -0.39
TMF1-201ENST00000398559 RNF139Q8WU17 664 aa12.6□□□□□ -0.39
TMF1-201ENST00000398559 VPS11Q9H270 941 aa12.6□□□□□ -0.39
TMF1-201ENST00000398559 KRT38O76015 456 aa12.6□□□□□ -0.39
TMF1-201ENST00000398559 MARK3P27448 753 aa12.6□□□□□ -0.39
TMF1-201ENST00000398559 NUDCD3Q8IVD9 361 aa12.6□□□□□ -0.39
TMF1-201ENST00000398559 ZNF579Q8NAF0 562 aaKnown RBP12.6□□□□□ -0.39
TMF1-201ENST00000398559 TTLL11Q8NHH1 800 aa12.6□□□□□ -0.39
TMF1-201ENST00000398559 OSBPL5Q9H0X9 879 aaPredicted RBP12.6□□□□□ -0.39
TMF1-201ENST00000398559 ZBTB1Q9Y2K1 713 aa12.6□□□□□ -0.39
TMF1-201ENST00000398559 GRID2IPA4D2P6 1211 aa12.59□□□□□ -0.39
TMF1-201ENST00000398559 KPNA7A9QM74 516 aa12.59□□□□□ -0.39
TMF1-201ENST00000398559 PDXDC2PQ6P474 469 aa12.59□□□□□ -0.39
TMF1-201ENST00000398559 FMR1NBQ8N0W7 255 aaPredicted RBP12.59□□□□□ -0.39
TMF1-201ENST00000398559 NUP85Q9BW27 656 aa12.59□□□□□ -0.39
TMF1-201ENST00000398559 OSBPL1AQ9BXW6 950 aa12.59□□□□□ -0.39
TMF1-201ENST00000398559 DBNDD1Q9H9R9 158 aa12.59□□□□□ -0.39
TMF1-201ENST00000398559 SLC13A4Q9UKG4 626 aa12.59□□□□□ -0.39
TMF1-201ENST00000398559 TRIM33Q9UPN9 1127 aa12.59□□□□□ -0.39
TMF1-201ENST00000398559 K7ERI5 159 aa12.59□□□□□ -0.39
TMF1-201ENST00000398559 ATP6V1G3Q96LB4 118 aa12.59□□□□□ -0.39
TMF1-201ENST00000398559 TAF1DQ9H5J8 278 aaPredicted RBP12.59□□□□□ -0.39
TMF1-201ENST00000398559 NEDD4P46934 1319 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms