RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 PLCB4Q15147 1175 aa11.19□□□□□ -0.62
NIFKP1-201ENST00000398317 QPCTQ16769 361 aa11.19□□□□□ -0.62
NIFKP1-201ENST00000398317 ADCK5Q3MIX3 580 aa11.19□□□□□ -0.62
NIFKP1-201ENST00000398317 TIGD5Q53EQ6 642 aa11.19□□□□□ -0.62
NIFKP1-201ENST00000398317 RNF20Q5VTR2 975 aa11.19□□□□□ -0.62
NIFKP1-201ENST00000398317 PTCRAQ6ISU1 281 aaPredicted RBP11.19□□□□□ -0.62
NIFKP1-201ENST00000398317 PRR7Q8TB68 274 aa11.19□□□□□ -0.62
NIFKP1-201ENST00000398317 LINC01599Q8WXQ3 324 aa11.19□□□□□ -0.62
NIFKP1-201ENST00000398317 UIMC1Q96RL1 719 aa11.19□□□□□ -0.62
NIFKP1-201ENST00000398317 SDF4Q9BRK5 362 aa11.19□□□□□ -0.62
NIFKP1-201ENST00000398317 ANO3Q9BYT9 981 aa11.19□□□□□ -0.62
NIFKP1-201ENST00000398317 IRX2Q9BZI1 471 aaPredicted RBP11.19□□□□□ -0.62
NIFKP1-201ENST00000398317 AZI2Q9H6S1 392 aa11.19□□□□□ -0.62
NIFKP1-201ENST00000398317 RBM28Q9NW13 759 aaKnown RBP11.19□□□□□ -0.62
NIFKP1-201ENST00000398317 NAP1L2Q9ULW6 460 aaPredicted RBP11.19□□□□□ -0.62
NIFKP1-201ENST00000398317 COL4A6Q14031 1691 aa11.19□□□□□ -0.62
NIFKP1-201ENST00000398317 WDR81Q562E7 1941 aa11.19□□□□□ -0.62
NIFKP1-201ENST00000398317 NFASCO94856 1347 aa11.18□□□□□ -0.62
NIFKP1-201ENST00000398317 ADGRA3Q8IWK6 1321 aa11.18□□□□□ -0.62
NIFKP1-201ENST00000398317 SMCO2A6NFE2 343 aa11.18□□□□□ -0.62
NIFKP1-201ENST00000398317 RRN3P2A6NIE6 340 aa11.18□□□□□ -0.62
NIFKP1-201ENST00000398317 GOLGA8AA7E2F4 631 aa11.18□□□□□ -0.62
NIFKP1-201ENST00000398317 GOLGA8BA8MQT2 603 aa11.18□□□□□ -0.62
NIFKP1-201ENST00000398317 DDX39AO00148 427 aaKnown RBP11.18□□□□□ -0.62
NIFKP1-201ENST00000398317 STXBP3O00186 592 aa11.18□□□□□ -0.62
NIFKP1-201ENST00000398317 GRM6O15303 877 aa11.18□□□□□ -0.62
NIFKP1-201ENST00000398317 LINC00271P0C7V0 271 aa11.18□□□□□ -0.62
NIFKP1-201ENST00000398317 CDC27P30260 824 aa11.18□□□□□ -0.62
NIFKP1-201ENST00000398317 BMPR1AP36894 532 aa11.18□□□□□ -0.62
NIFKP1-201ENST00000398317 CLK2P49760 499 aaKnown RBP11.18□□□□□ -0.62
NIFKP1-201ENST00000398317 STAT5BP51692 787 aa11.18□□□□□ -0.62
NIFKP1-201ENST00000398317 CEP55Q53EZ4 464 aa11.18□□□□□ -0.62
NIFKP1-201ENST00000398317 BMP2KLQ5H9B9 411 aa11.18□□□□□ -0.62
NIFKP1-201ENST00000398317 TSHZ1Q6ZSZ6 1077 aa11.18□□□□□ -0.62
NIFKP1-201ENST00000398317 DHX32Q7L7V1 743 aaKnown RBP11.18□□□□□ -0.62
NIFKP1-201ENST00000398317 RTN4RL1Q86UN2 441 aaPredicted RBP11.18□□□□□ -0.62
NIFKP1-201ENST00000398317 FAM178BQ8IXR5 827 aa11.18□□□□□ -0.62
NIFKP1-201ENST00000398317 NEK9Q8TD19 979 aa11.18□□□□□ -0.62
NIFKP1-201ENST00000398317 NSUN3Q9H649 340 aaKnown RBP11.18□□□□□ -0.62
NIFKP1-201ENST00000398317 RC3H2Q9HBD1 1191 aaKnown RBP11.18□□□□□ -0.62
NIFKP1-201ENST00000398317 AGO4Q9HCK5 861 aaKnown RBP11.18□□□□□ -0.62
NIFKP1-201ENST00000398317 KLF18A0A0U1RQI7 1052 aa11.17□□□□□ -0.62
NIFKP1-201ENST00000398317 FOSP01100 380 aaPredicted RBP11.17□□□□□ -0.62
NIFKP1-201ENST00000398317 CPA1P15085 419 aa11.17□□□□□ -0.62
NIFKP1-201ENST00000398317 IBSPP21815 317 aaPredicted RBP11.17□□□□□ -0.62
NIFKP1-201ENST00000398317 ZNF76P36508 570 aa11.17□□□□□ -0.62
NIFKP1-201ENST00000398317 BTG3Q14201 252 aaPredicted RBP11.17□□□□□ -0.62
NIFKP1-201ENST00000398317 TMEM31Q5JXX7 168 aa11.17□□□□□ -0.62
NIFKP1-201ENST00000398317 IER5Q5VY09 327 aa11.17□□□□□ -0.62
NIFKP1-201ENST00000398317 JAKMIP3Q5VZ66 844 aa11.17□□□□□ -0.62
NIFKP1-201ENST00000398317 PLPPR4Q7Z2D5 763 aa11.17□□□□□ -0.62
NIFKP1-201ENST00000398317 GJD3Q8N144 294 aa11.17□□□□□ -0.62
NIFKP1-201ENST00000398317 TSC1Q92574 1164 aa11.17□□□□□ -0.62
NIFKP1-201ENST00000398317 ZNF689Q96CS4 500 aaPredicted RBP11.17□□□□□ -0.62
NIFKP1-201ENST00000398317 PABPC5Q96DU9 382 aaKnown RBP11.17□□□□□ -0.62
NIFKP1-201ENST00000398317 C11orf16Q9NQ32 467 aa11.17□□□□□ -0.62
NIFKP1-201ENST00000398317 CLDND1Q9NY35 253 aa11.17□□□□□ -0.62
NIFKP1-201ENST00000398317 BARHL2Q9NY43 387 aa11.17□□□□□ -0.62
NIFKP1-201ENST00000398317 PCDHA2Q9Y5H9 948 aa11.17□□□□□ -0.62
NIFKP1-201ENST00000398317 TRPV2Q9Y5S1 764 aa11.17□□□□□ -0.62
NIFKP1-201ENST00000398317 CFAP99D6REC4 459 aa11.16□□□□□ -0.62
NIFKP1-201ENST00000398317 C5orf67F2Z3F1 127 aa11.16□□□□□ -0.62
NIFKP1-201ENST00000398317 PI4K2BG5E9Z4 385 aa11.16□□□□□ -0.62
NIFKP1-201ENST00000398317 M0QZ92 97 aa11.16□□□□□ -0.62
NIFKP1-201ENST00000398317 MEIS1O00470 390 aa11.16□□□□□ -0.62
NIFKP1-201ENST00000398317 BACH1O14867 736 aa11.16□□□□□ -0.62
NIFKP1-201ENST00000398317 ADAMTS3O15072 1205 aa11.16□□□□□ -0.62
NIFKP1-201ENST00000398317 DGKIO75912 1065 aa11.16□□□□□ -0.62
NIFKP1-201ENST00000398317 ATG7O95352 703 aa11.16□□□□□ -0.62
NIFKP1-201ENST00000398317 CCNE2O96020 404 aa11.16□□□□□ -0.62
NIFKP1-201ENST00000398317 RB1P06400 928 aa11.16□□□□□ -0.62
NIFKP1-201ENST00000398317 GTF2F1P35269 517 aaKnown RBP eCLIP11.16□□□□□ -0.62
NIFKP1-201ENST00000398317 ADD1P35611 737 aaKnown RBP11.16□□□□□ -0.62
NIFKP1-201ENST00000398317 SREBF1P36956 1147 aa11.16□□□□□ -0.62
NIFKP1-201ENST00000398317 CLUL1Q15846 466 aa11.16□□□□□ -0.62
NIFKP1-201ENST00000398317 TMEM266Q2M3C6 531 aa11.16□□□□□ -0.62
NIFKP1-201ENST00000398317 TSGA10IPQ3SY00 556 aa11.16□□□□□ -0.62
NIFKP1-201ENST00000398317 PAN2Q504Q3 1202 aaKnown RBP11.16□□□□□ -0.62
NIFKP1-201ENST00000398317 MTHFD1LQ6UB35 978 aa11.16□□□□□ -0.62
NIFKP1-201ENST00000398317 CLP1Q92989 425 aaKnown RBP11.16□□□□□ -0.62
NIFKP1-201ENST00000398317 C11orf84Q9BUA3 381 aaPredicted RBP11.16□□□□□ -0.62
NIFKP1-201ENST00000398317 CELF4Q9BZC1 486 aaKnown RBP11.16□□□□□ -0.62
NIFKP1-201ENST00000398317 IGFLR1Q9H665 355 aa11.16□□□□□ -0.62
NIFKP1-201ENST00000398317 ALG13Q9NP73 1137 aaKnown RBP11.16□□□□□ -0.62
NIFKP1-201ENST00000398317 PADI3Q9ULW8 664 aa11.16□□□□□ -0.62
NIFKP1-201ENST00000398317 RWDD3Q9Y3V2 267 aa11.16□□□□□ -0.62
NIFKP1-201ENST00000398317 MRPL42Q9Y6G3 142 aaKnown RBP11.16□□□□□ -0.62
NIFKP1-201ENST00000398317 FNDC1Q4ZHG4 1894 aaPredicted RBP11.16□□□□□ -0.62
NIFKP1-201ENST00000398317 PLXNA4Q9HCM2 1894 aa11.15□□□□□ -0.62
NIFKP1-201ENST00000398317 WDFY4Q6ZS81 3184 aa11.15□□□□□ -0.62
NIFKP1-201ENST00000398317 MUC6Q6W4X9 2439 aa11.15□□□□□ -0.62
NIFKP1-201ENST00000398317 FAM86B1E9PN63 330 aa11.15□□□□□ -0.62
NIFKP1-201ENST00000398317 GPR37L1O60883 481 aa11.15□□□□□ -0.62
NIFKP1-201ENST00000398317 FAM86B2P0C5J1 330 aa11.15□□□□□ -0.62
NIFKP1-201ENST00000398317 KLRC1P26715 233 aa11.15□□□□□ -0.62
NIFKP1-201ENST00000398317 LTBRP36941 435 aa11.15□□□□□ -0.62
NIFKP1-201ENST00000398317 PLA2G5P39877 138 aa11.15□□□□□ -0.62
NIFKP1-201ENST00000398317 GATMP50440 423 aa11.15□□□□□ -0.62
NIFKP1-201ENST00000398317 FGD1P98174 961 aa11.15□□□□□ -0.62
NIFKP1-201ENST00000398317 KRT76Q01546 638 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms