RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 TRIB2Q92519 343 aa21.56■■□□□ 1.04
PDLIM2-205ENST00000397761 DRC1Q96MC2 740 aa21.56■■□□□ 1.04
PDLIM2-205ENST00000397761 DHX33Q9H6R0 707 aaKnown RBP21.56■■□□□ 1.04
PDLIM2-205ENST00000397761 Q9Y3F1 56 aa21.56■■□□□ 1.04
PDLIM2-205ENST00000397761 BICDL2A1A5D9 508 aa21.55■■□□□ 1.04
PDLIM2-205ENST00000397761 KIF20AO95235 890 aa21.55■■□□□ 1.04
PDLIM2-205ENST00000397761 GNRH1P01148 92 aa21.55■■□□□ 1.04
PDLIM2-205ENST00000397761 LGALS2P05162 132 aa21.55■■□□□ 1.04
PDLIM2-205ENST00000397761 PMS1P54277 932 aaKnown RBP21.55■■□□□ 1.04
PDLIM2-205ENST00000397761 RTP1P59025 263 aa21.55■■□□□ 1.04
PDLIM2-205ENST00000397761 ZCWPW2Q504Y3 356 aa21.55■■□□□ 1.04
PDLIM2-205ENST00000397761 TRIM50Q86XT4 487 aa21.55■■□□□ 1.04
PDLIM2-205ENST00000397761 MYCT1Q8N699 235 aa21.55■■□□□ 1.04
PDLIM2-205ENST00000397761 GLG1Q92896 1179 aa21.55■■□□□ 1.04
PDLIM2-205ENST00000397761 STRA6Q9BX79 667 aa21.55■■□□□ 1.04
PDLIM2-205ENST00000397761 SEMA6BQ9H3T3 888 aa21.55■■□□□ 1.04
PDLIM2-205ENST00000397761 ZHX3Q9H4I2 956 aa21.55■■□□□ 1.04
PDLIM2-205ENST00000397761 XPNPEP1Q9NQW7 623 aa21.55■■□□□ 1.04
PDLIM2-205ENST00000397761 TBC1D7Q9P0N9 293 aa21.55■■□□□ 1.04
PDLIM2-205ENST00000397761 A6NJR5 290 aa21.54■■□□□ 1.04
PDLIM2-205ENST00000397761 SFI1A8K8P3 1242 aa21.54■■□□□ 1.04
PDLIM2-205ENST00000397761 EIF3DO15371 548 aaKnown RBP eCLIP21.54■■□□□ 1.04
PDLIM2-205ENST00000397761 MMP3P08254 477 aa21.54■■□□□ 1.04
PDLIM2-205ENST00000397761 CYBAP13498 195 aa21.54■■□□□ 1.04
PDLIM2-205ENST00000397761 CTCFP49711 727 aaPredicted RBP21.54■■□□□ 1.04
PDLIM2-205ENST00000397761 CASP5P51878 434 aa21.54■■□□□ 1.04
PDLIM2-205ENST00000397761 PLCB4Q15147 1175 aa21.54■■□□□ 1.04
PDLIM2-205ENST00000397761 LRRC41Q15345 812 aa21.54■■□□□ 1.04
PDLIM2-205ENST00000397761 OR6J1Q8NGC5 347 aa21.54■■□□□ 1.04
PDLIM2-205ENST00000397761 ZNF507Q8TCN5 953 aa21.54■■□□□ 1.04
PDLIM2-205ENST00000397761 ANP32BQ92688 251 aaKnown RBP21.54■■□□□ 1.04
PDLIM2-205ENST00000397761 DUSP9Q99956 384 aaKnown RBP21.54■■□□□ 1.04
PDLIM2-205ENST00000397761 C17orf75Q9HAS0 396 aa21.54■■□□□ 1.04
PDLIM2-205ENST00000397761 ATP6V0A4Q9HBG4 840 aa21.54■■□□□ 1.04
PDLIM2-205ENST00000397761 POLD4Q9HCU8 107 aa21.54■■□□□ 1.04
PDLIM2-205ENST00000397761 ERAP1Q9NZ08 941 aa21.54■■□□□ 1.04
PDLIM2-205ENST00000397761 LARSQ9P2J5 1176 aaKnown RBP21.54■■□□□ 1.04
PDLIM2-205ENST00000397761 SRRDQ9UH36 339 aa21.54■■□□□ 1.04
PDLIM2-205ENST00000397761 UBE4BO95155 1302 aa21.54■■□□□ 1.04
PDLIM2-205ENST00000397761 TRIM49BA6NDI0 452 aa21.53■■□□□ 1.04
PDLIM2-205ENST00000397761 ZBTB42B2RXF5 422 aa21.53■■□□□ 1.04
PDLIM2-205ENST00000397761 PPP1R37O75864 691 aa21.53■■□□□ 1.04
PDLIM2-205ENST00000397761 PLS3P13797 630 aa21.53■■□□□ 1.04
PDLIM2-205ENST00000397761 RFC5P40937 340 aa21.53■■□□□ 1.04
PDLIM2-205ENST00000397761 LRRC63Q05C16 580 aa21.53■■□□□ 1.04
PDLIM2-205ENST00000397761 MTERF2Q49AM1 385 aa21.53■■□□□ 1.04
PDLIM2-205ENST00000397761 COL13A1Q5TAT6 717 aaPredicted RBP21.53■■□□□ 1.04
PDLIM2-205ENST00000397761 MFSD14CQ5VZR4 134 aa21.53■■□□□ 1.04
PDLIM2-205ENST00000397761 ANKRD40Q6AI12 368 aa21.53■■□□□ 1.04
PDLIM2-205ENST00000397761 ZNF720Q7Z2F6 126 aa21.53■■□□□ 1.04
PDLIM2-205ENST00000397761 TRMT1LQ7Z2T5 733 aaKnown RBP21.53■■□□□ 1.04
PDLIM2-205ENST00000397761 TRPV1Q8NER1 839 aa21.53■■□□□ 1.04
PDLIM2-205ENST00000397761 KIFAP3Q92845 792 aa21.53■■□□□ 1.04
PDLIM2-205ENST00000397761 PPP1R9BQ96SB3 815 aa21.53■■□□□ 1.04
PDLIM2-205ENST00000397761 C16orf70Q9BSU1 422 aa21.53■■□□□ 1.04
PDLIM2-205ENST00000397761 KCTD10Q9H3F6 313 aa21.53■■□□□ 1.04
PDLIM2-205ENST00000397761 ST6GALNAC4Q9H4F1 302 aa21.53■■□□□ 1.04
PDLIM2-205ENST00000397761 MRPL44Q9H9J2 332 aaKnown RBP21.53■■□□□ 1.04
PDLIM2-205ENST00000397761 SAMSN1Q9NSI8 373 aaKnown RBP21.53■■□□□ 1.04
PDLIM2-205ENST00000397761 FAM184BQ9ULE4 1060 aa21.53■■□□□ 1.04
PDLIM2-205ENST00000397761 ADCY5O95622 1261 aa21.52■■□□□ 1.04
PDLIM2-205ENST00000397761 ATP1A3P13637 1013 aa21.52■■□□□ 1.04
PDLIM2-205ENST00000397761 HOXD13P35453 343 aa21.52■■□□□ 1.04
PDLIM2-205ENST00000397761 EMC2Q15006 297 aa21.52■■□□□ 1.04
PDLIM2-205ENST00000397761 ODR4Q5SWX8 454 aa21.52■■□□□ 1.04
PDLIM2-205ENST00000397761 FAM178BQ8IXR5 827 aa21.52■■□□□ 1.04
PDLIM2-205ENST00000397761 CD99L2Q8TCZ2 262 aa21.52■■□□□ 1.04
PDLIM2-205ENST00000397761 BEGAINQ9BUH8 593 aa21.52■■□□□ 1.04
PDLIM2-205ENST00000397761 HBP1O60381 514 aa21.52■■□□□ 1.03
PDLIM2-205ENST00000397761 HSPA8P11142 646 aaKnown RBP21.52■■□□□ 1.03
PDLIM2-205ENST00000397761 AKR1A1P14550 325 aa21.52■■□□□ 1.03
PDLIM2-205ENST00000397761 HOXD10P28358 340 aa21.52■■□□□ 1.03
PDLIM2-205ENST00000397761 SLC17A8Q8NDX2 589 aa21.52■■□□□ 1.03
PDLIM2-205ENST00000397761 NOC3LQ8WTT2 800 aaKnown RBP21.52■■□□□ 1.03
PDLIM2-205ENST00000397761 NTPCRQ9BSD7 190 aaKnown RBP21.52■■□□□ 1.03
PDLIM2-205ENST00000397761 GPRC5CQ9NQ84 441 aa21.52■■□□□ 1.03
PDLIM2-205ENST00000397761 MAFO75444 373 aaPredicted RBP21.51■■□□□ 1.03
PDLIM2-205ENST00000397761 MYBP10242 640 aa21.51■■□□□ 1.03
PDLIM2-205ENST00000397761 NMT1P30419 496 aaKnown RBP21.51■■□□□ 1.03
PDLIM2-205ENST00000397761 ZNF75DP51815 510 aa21.51■■□□□ 1.03
PDLIM2-205ENST00000397761 CCDC173Q0VFZ6 552 aa21.51■■□□□ 1.03
PDLIM2-205ENST00000397761 ALCAMQ13740 583 aa21.51■■□□□ 1.03
PDLIM2-205ENST00000397761 DGKDQ16760 1214 aa21.51■■□□□ 1.03
PDLIM2-205ENST00000397761 TLK2Q86UE8 772 aa21.51■■□□□ 1.03
PDLIM2-205ENST00000397761 IRF2BP1Q8IU81 584 aa21.51■■□□□ 1.03
PDLIM2-205ENST00000397761 SPIRE2Q8WWL2 714 aa21.51■■□□□ 1.03
PDLIM2-205ENST00000397761 KCNN1Q92952 543 aa21.51■■□□□ 1.03
PDLIM2-205ENST00000397761 ERO1AQ96HE7 468 aa21.51■■□□□ 1.03
PDLIM2-205ENST00000397761 MRFAP1L1Q96HT8 127 aa21.51■■□□□ 1.03
PDLIM2-205ENST00000397761 THAP9Q9H5L6 903 aa21.51■■□□□ 1.03
PDLIM2-205ENST00000397761 PRDM10Q9NQV6 1147 aa21.51■■□□□ 1.03
PDLIM2-205ENST00000397761 FRMPD3Q5JV73 1810 aa21.5■■□□□ 1.03
PDLIM2-205ENST00000397761 IGKV6-21A0A0C4DH24 114 aa21.5■■□□□ 1.03
PDLIM2-205ENST00000397761 FKTNO75072 461 aa21.5■■□□□ 1.03
PDLIM2-205ENST00000397761 GCNT3O95395 438 aa21.5■■□□□ 1.03
PDLIM2-205ENST00000397761 POLGP54098 1239 aaPredicted RBP21.5■■□□□ 1.03
PDLIM2-205ENST00000397761 NCKAP1LP55160 1127 aa21.5■■□□□ 1.03
PDLIM2-205ENST00000397761 KNOP1Q1ED39 458 aaKnown RBP21.5■■□□□ 1.03
PDLIM2-205ENST00000397761 FAM102BQ5T8I3 360 aa21.5■■□□□ 1.03
PDLIM2-205ENST00000397761 PPP4R3CPQ6ZMV5 832 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms