RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 MRPS27Q92552 414 aaKnown RBP18.35■□□□□ 0.53
CUX2-202ENST00000397643 OSMRQ99650 979 aa18.35■□□□□ 0.53
CUX2-202ENST00000397643 TCF25Q9BQ70 676 aa18.35■□□□□ 0.53
CUX2-202ENST00000397643 ELAC1Q9H777 363 aaKnown RBP18.35■□□□□ 0.53
CUX2-202ENST00000397643 GPR182O15218 404 aa18.34■□□□□ 0.53
CUX2-202ENST00000397643 GPR32O75388 356 aa18.34■□□□□ 0.53
CUX2-202ENST00000397643 C22orf31O95567 290 aa18.34■□□□□ 0.53
CUX2-202ENST00000397643 SP100P23497 879 aaPredicted RBP18.34■□□□□ 0.53
CUX2-202ENST00000397643 KIZQ2M2Z5 673 aa18.34■□□□□ 0.53
CUX2-202ENST00000397643 LLGL2Q6P1M3 1020 aa18.34■□□□□ 0.53
CUX2-202ENST00000397643 FANCBQ8NB91 859 aa18.34■□□□□ 0.53
CUX2-202ENST00000397643 RIPOR3Q96MK2 946 aa18.34■□□□□ 0.53
CUX2-202ENST00000397643 PPP1R16BQ96T49 567 aa18.34■□□□□ 0.53
CUX2-202ENST00000397643 APOL5Q9BWW9 433 aa18.34■□□□□ 0.53
CUX2-202ENST00000397643 ANO3Q9BYT9 981 aa18.34■□□□□ 0.53
CUX2-202ENST00000397643 RIC8AQ9NPQ8 531 aa18.34■□□□□ 0.53
CUX2-202ENST00000397643 RNF216Q9NWF9 866 aaPredicted RBP18.34■□□□□ 0.53
CUX2-202ENST00000397643 FAM186AA6NE01 2351 aa18.33■□□□□ 0.53
CUX2-202ENST00000397643 PROB1E7EW31 1015 aa18.33■□□□□ 0.52
CUX2-202ENST00000397643 DDX39AO00148 427 aaKnown RBP18.33■□□□□ 0.52
CUX2-202ENST00000397643 DHX15O43143 795 aaKnown RBP18.33■□□□□ 0.52
CUX2-202ENST00000397643 SRGAP2BP0DMP2 458 aa18.33■□□□□ 0.52
CUX2-202ENST00000397643 SREBF1P36956 1147 aa18.33■□□□□ 0.52
CUX2-202ENST00000397643 PBX3P40426 434 aa18.33■□□□□ 0.52
CUX2-202ENST00000397643 CRYBB1P53674 252 aaPredicted RBP18.33■□□□□ 0.52
CUX2-202ENST00000397643 MICU3Q86XE3 530 aa18.33■□□□□ 0.52
CUX2-202ENST00000397643 TEX2Q8IWB9 1127 aa18.33■□□□□ 0.52
CUX2-202ENST00000397643 ATOH1Q92858 354 aaPredicted RBP18.33■□□□□ 0.52
CUX2-202ENST00000397643 CASD1Q96PB1 797 aa18.33■□□□□ 0.52
CUX2-202ENST00000397643 LRRC2Q9BYS8 371 aa18.33■□□□□ 0.52
CUX2-202ENST00000397643 TMEM117Q9H0C3 514 aa18.33■□□□□ 0.52
CUX2-202ENST00000397643 ATP6V0A4Q9HBG4 840 aa18.33■□□□□ 0.52
CUX2-202ENST00000397643 ENTPD7Q9NQZ7 604 aa18.33■□□□□ 0.52
CUX2-202ENST00000397643 SLC12A7Q9Y666 1083 aa18.33■□□□□ 0.52
CUX2-202ENST00000397643 VPS13AQ96RL7 3174 aa18.32■□□□□ 0.52
CUX2-202ENST00000397643 H0Y858 1186 aa18.32■□□□□ 0.52
CUX2-202ENST00000397643 BACH1O14867 736 aa18.32■□□□□ 0.52
CUX2-202ENST00000397643 HOXB8P17481 243 aaPredicted RBP18.32■□□□□ 0.52
CUX2-202ENST00000397643 CLK2P49760 499 aaKnown RBP18.32■□□□□ 0.52
CUX2-202ENST00000397643 NUBP1P53384 320 aa18.32■□□□□ 0.52
CUX2-202ENST00000397643 FUT2Q10981 343 aa18.32■□□□□ 0.52
CUX2-202ENST00000397643 ZNF484Q5JVG2 852 aa18.32■□□□□ 0.52
CUX2-202ENST00000397643 ODR4Q5SWX8 454 aa18.32■□□□□ 0.52
CUX2-202ENST00000397643 FAM160B1Q5W0V3 765 aa18.32■□□□□ 0.52
CUX2-202ENST00000397643 PPP1R18Q6NYC8 613 aa18.32■□□□□ 0.52
CUX2-202ENST00000397643 KCNT2Q6UVM3 1135 aa18.32■□□□□ 0.52
CUX2-202ENST00000397643 SGMS1Q86VZ5 419 aa18.32■□□□□ 0.52
CUX2-202ENST00000397643 KREMEN2Q8NCW0 462 aa18.32■□□□□ 0.52
CUX2-202ENST00000397643 LSG1Q9H089 658 aaKnown RBP18.32■□□□□ 0.52
CUX2-202ENST00000397643 IRF2BPLQ9H1B7 796 aa18.32■□□□□ 0.52
CUX2-202ENST00000397643 NGRNQ9NPE2 291 aaKnown RBP18.32■□□□□ 0.52
CUX2-202ENST00000397643 ZNF302Q9NR11 478 aa18.32■□□□□ 0.52
CUX2-202ENST00000397643 MYO10Q9HD67 2058 aa18.32■□□□□ 0.52
CUX2-202ENST00000397643 IGLV3-22A0A075B6J6 115 aa18.31■□□□□ 0.52
CUX2-202ENST00000397643 FAM86B1E9PN63 330 aa18.31■□□□□ 0.52
CUX2-202ENST00000397643 GALR2O43603 387 aaPredicted RBP18.31■□□□□ 0.52
CUX2-202ENST00000397643 BRD1O95696 1058 aa18.31■□□□□ 0.52
CUX2-202ENST00000397643 FOSP01100 380 aaPredicted RBP18.31■□□□□ 0.52
CUX2-202ENST00000397643 VTNP04004 478 aa18.31■□□□□ 0.52
CUX2-202ENST00000397643 FAM86B2P0C5J1 330 aa18.31■□□□□ 0.52
CUX2-202ENST00000397643 NAPAP54920 295 aa18.31■□□□□ 0.52
CUX2-202ENST00000397643 PDXDC2PQ6P474 469 aa18.31■□□□□ 0.52
CUX2-202ENST00000397643 NIPA1Q7RTP0 329 aa18.31■□□□□ 0.52
CUX2-202ENST00000397643 CRYGNQ8WXF5 182 aa18.31■□□□□ 0.52
CUX2-202ENST00000397643 SMOC2Q9H3U7 446 aa18.31■□□□□ 0.52
CUX2-202ENST00000397643 POMKQ9H5K3 350 aa18.31■□□□□ 0.52
CUX2-202ENST00000397643 HCFC2Q9Y5Z7 792 aa18.31■□□□□ 0.52
CUX2-202ENST00000397643 GVINP1Q7Z2Y8 2422 aa18.3■□□□□ 0.52
CUX2-202ENST00000397643 C2CD4DB7Z1M9 353 aa18.3■□□□□ 0.52
CUX2-202ENST00000397643 SLC27A2O14975 620 aa18.3■□□□□ 0.52
CUX2-202ENST00000397643 ADCY7P51828 1080 aa18.3■□□□□ 0.52
CUX2-202ENST00000397643 BMP2KLQ5H9B9 411 aa18.3■□□□□ 0.52
CUX2-202ENST00000397643 SWSAP1Q6NVH7 229 aa18.3■□□□□ 0.52
CUX2-202ENST00000397643 ASCL5Q7RTU5 278 aa18.3■□□□□ 0.52
CUX2-202ENST00000397643 ZBTB33Q86T24 672 aa18.3■□□□□ 0.52
CUX2-202ENST00000397643 LRRC43Q8N309 656 aa18.3■□□□□ 0.52
CUX2-202ENST00000397643 LINC01465Q8N7H1 131 aa18.3■□□□□ 0.52
CUX2-202ENST00000397643 TMEM105Q8N8V8 129 aa18.3■□□□□ 0.52
CUX2-202ENST00000397643 ZNF558Q96NG5 402 aa18.3■□□□□ 0.52
CUX2-202ENST00000397643 PUF60Q9UHX1 559 aaKnown RBP18.3■□□□□ 0.52
CUX2-202ENST00000397643 SORCS3Q9UPU3 1222 aa18.3■□□□□ 0.52
CUX2-202ENST00000397643 NR2E1Q9Y466 385 aa18.3■□□□□ 0.52
CUX2-202ENST00000397643 DCHS1Q96JQ0 3298 aa18.29■□□□□ 0.52
CUX2-202ENST00000397643 C2orf71A6NGG8 1288 aa18.29■□□□□ 0.52
CUX2-202ENST00000397643 PPM1AP35813 382 aa18.29■□□□□ 0.52
CUX2-202ENST00000397643 AP3B2Q13367 1082 aa18.29■□□□□ 0.52
CUX2-202ENST00000397643 MTMR3Q13615 1198 aa18.29■□□□□ 0.52
CUX2-202ENST00000397643 CLLU1OSQ5K130 101 aa18.29■□□□□ 0.52
CUX2-202ENST00000397643 APOA5Q6Q788 366 aa18.29■□□□□ 0.52
CUX2-202ENST00000397643 UBALD2Q8IYN6 164 aa18.29■□□□□ 0.52
CUX2-202ENST00000397643 SLC39A11Q8N1S5 342 aa18.29■□□□□ 0.52
CUX2-202ENST00000397643 BBXQ8WY36 941 aaPredicted RBP18.29■□□□□ 0.52
CUX2-202ENST00000397643 CASP10Q92851 521 aa18.29■□□□□ 0.52
CUX2-202ENST00000397643 ADAM7Q9H2U9 754 aa18.29■□□□□ 0.52
CUX2-202ENST00000397643 TSHZ2Q9NRE2 1034 aa18.29■□□□□ 0.52
CUX2-202ENST00000397643 MAFBQ9Y5Q3 323 aaPredicted RBP18.29■□□□□ 0.52
CUX2-202ENST00000397643 MYH9P35579 1960 aaKnown RBP18.28■□□□□ 0.52
CUX2-202ENST00000397643 HOXA2O43364 376 aa18.28■□□□□ 0.52
CUX2-202ENST00000397643 CLASP2O75122 1294 aaKnown RBP18.28■□□□□ 0.52
CUX2-202ENST00000397643 CLCN3P51790 818 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms