RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 CTNNA1P35221 906 aaKnown RBP10.14□□□□□ -0.79
NDE1-201ENST00000396354 EPHB4P54760 987 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 IFFO1Q0D2I5 559 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 HGSNATQ68CP4 663 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 CCDC174Q6PII3 467 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 GLYCTKQ8IVS8 523 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 CCDC65Q8IXS2 484 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 IFT20Q8IY31 132 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 GUF1Q8N442 669 aaKnown RBP10.14□□□□□ -0.79
NDE1-201ENST00000396354 ZNF713Q8N859 430 aaPredicted RBP10.14□□□□□ -0.79
NDE1-201ENST00000396354 CNKSR1Q969H4 720 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 PCIF1Q9H4Z3 704 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 KCNMB3Q9NPA1 279 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 ACP6Q9NPH0 428 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 ARMCX3Q9UH62 379 aaPredicted RBP10.14□□□□□ -0.79
NDE1-201ENST00000396354 ZC3H4Q9UPT8 1303 aaKnown RBP10.14□□□□□ -0.79
NDE1-201ENST00000396354 ANO9A1A5B4 782 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 ZNF233A6NK53 670 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 DCDC2CA8MYV0 355 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 NMT1P30419 496 aaKnown RBP10.14□□□□□ -0.79
NDE1-201ENST00000396354 INPP5BP32019 993 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 PPP1R18Q6NYC8 613 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 PEX26Q7Z412 305 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 LRRC4CQ9HCJ2 640 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 PSD3Q9NYI0 1048 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 AJAP1Q9UKB5 411 aaPredicted RBP10.14□□□□□ -0.79
NDE1-201ENST00000396354 ATP8A1Q9Y2Q0 1164 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 OPA1O60313 960 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 EGFRP00533 1210 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 MRPL12P52815 198 aaKnown RBP10.14□□□□□ -0.79
NDE1-201ENST00000396354 ARSHQ5FYA8 562 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 ALKBH5Q6P6C2 394 aaKnown RBP10.14□□□□□ -0.79
NDE1-201ENST00000396354 ZNF571Q7Z3V5 609 aaPredicted RBP10.14□□□□□ -0.79
NDE1-201ENST00000396354 OTUD6BQ8N6M0 293 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 NLGN2Q8NFZ4 835 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 ETNPPLQ8TBG4 499 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 MDM1Q8TC05 714 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 CCDC17Q96LX7 622 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 GMLQ99445 158 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 REEP2Q9BRK0 252 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 TMEM39BQ9GZU3 492 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 CUEDC2Q9H467 287 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 MLXIPLQ9NP71 852 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 TMOD4Q9NZQ9 345 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 GCNT4Q9P109 453 aa10.14□□□□□ -0.79
NDE1-201ENST00000396354 GRID2IPA4D2P6 1211 aa10.13□□□□□ -0.79
NDE1-201ENST00000396354 TISP43B9A030 160 aa10.13□□□□□ -0.79
NDE1-201ENST00000396354 TTI1O43156 1089 aa10.13□□□□□ -0.79
NDE1-201ENST00000396354 ATMINO43313 823 aaPredicted RBP10.13□□□□□ -0.79
NDE1-201ENST00000396354 XRCC5P13010 732 aaKnown RBP10.13□□□□□ -0.79
NDE1-201ENST00000396354 FKBP1AP62942 108 aaKnown RBP10.13□□□□□ -0.79
NDE1-201ENST00000396354 HDLBPQ00341 1268 aaKnown RBP10.13□□□□□ -0.79
NDE1-201ENST00000396354 PPFIA1Q13136 1202 aa10.13□□□□□ -0.79
NDE1-201ENST00000396354 EXOC3L4Q17RC7 722 aa10.13□□□□□ -0.79
NDE1-201ENST00000396354 MYCT1Q8N699 235 aa10.13□□□□□ -0.79
NDE1-201ENST00000396354 TTLL6Q8N841 843 aa10.13□□□□□ -0.79
NDE1-201ENST00000396354 KAT2BQ92831 832 aa10.13□□□□□ -0.79
NDE1-201ENST00000396354 MRIQ9BWK5 157 aa10.13□□□□□ -0.79
NDE1-201ENST00000396354 DHX36Q9H2U1 1008 aaKnown RBP10.13□□□□□ -0.79
NDE1-201ENST00000396354 PTPN22Q9Y2R2 807 aa10.13□□□□□ -0.79
NDE1-201ENST00000396354 PCDHA2Q9Y5H9 948 aa10.13□□□□□ -0.79
NDE1-201ENST00000396354 FER1L6Q2WGJ9 1857 aa10.13□□□□□ -0.79
NDE1-201ENST00000396354 TBCAO75347 108 aaKnown RBP10.13□□□□□ -0.79
NDE1-201ENST00000396354 MYL1P05976 194 aa10.13□□□□□ -0.79
NDE1-201ENST00000396354 NR1D1P20393 614 aa10.13□□□□□ -0.79
NDE1-201ENST00000396354 MAGEA9P43362 315 aa10.13□□□□□ -0.79
NDE1-201ENST00000396354 IFNAR2P48551 515 aa10.13□□□□□ -0.79
NDE1-201ENST00000396354 TMEM179Q6ZVK1 233 aa10.13□□□□□ -0.79
NDE1-201ENST00000396354 MIGA2Q7L4E1 593 aa10.13□□□□□ -0.79
NDE1-201ENST00000396354 TADA2BQ86TJ2 420 aa10.13□□□□□ -0.79
NDE1-201ENST00000396354 DCAF4Q8WV16 495 aa10.13□□□□□ -0.79
NDE1-201ENST00000396354 GLG1Q92896 1179 aa10.13□□□□□ -0.79
NDE1-201ENST00000396354 RPGRIP1Q96KN7 1286 aa10.13□□□□□ -0.79
NDE1-201ENST00000396354 NR2E1Q9Y466 385 aa10.13□□□□□ -0.79
NDE1-201ENST00000396354 KIF13BQ9NQT8 1826 aa10.13□□□□□ -0.79
NDE1-201ENST00000396354 SPDYE3A6NKU9 549 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 AKAP3O75969 853 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 CALCAP01258 141 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 SERPING1P05155 500 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 ARHGAP4P98171 946 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 SP4Q02446 784 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 CATSPER3Q86XQ3 398 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 MGARPQ8TDB4 240 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 PPM1EQ8WY54 764 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 MBOAT7Q96N66 472 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 SELENOSQ9BQE4 189 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 SPON1Q9HCB6 807 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 NOVA2Q9UNW9 492 aaKnown RBP10.12□□□□□ -0.79
NDE1-201ENST00000396354 TARSL2A2RTX5 802 aaKnown RBP10.12□□□□□ -0.79
NDE1-201ENST00000396354 EIF3HO15372 352 aaKnown RBP eCLIP10.12□□□□□ -0.79
NDE1-201ENST00000396354 TUBBP07437 444 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 CYP11B2P19099 503 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 SSTR3P32745 418 aaPredicted RBP10.12□□□□□ -0.79
NDE1-201ENST00000396354 VPS41P49754 854 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 ERVK-9P63128 1117 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 LRRC63Q05C16 580 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 PAK2Q13177 524 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 PDIA5Q14554 519 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 KRT71Q3SY84 523 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 CCDC38Q502W7 563 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms