RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 RARRES1P49788 294 aa21.41■■□□□ 1.02
HOXA9-202ENST00000396345 CLCN3P51790 818 aa21.41■■□□□ 1.02
HOXA9-202ENST00000396345 POLGP54098 1239 aaPredicted RBP21.41■■□□□ 1.02
HOXA9-202ENST00000396345 TRAF7Q6Q0C0 670 aa21.41■■□□□ 1.02
HOXA9-202ENST00000396345 LRRC71Q8N4P6 559 aa21.41■■□□□ 1.02
HOXA9-202ENST00000396345 LINC01465Q8N7H1 131 aa21.41■■□□□ 1.02
HOXA9-202ENST00000396345 SLC7A3Q8WY07 619 aa21.41■■□□□ 1.02
HOXA9-202ENST00000396345 CALML4Q96GE6 196 aa21.41■■□□□ 1.02
HOXA9-202ENST00000396345 IPO9Q96P70 1041 aaKnown RBP21.41■■□□□ 1.02
HOXA9-202ENST00000396345 PNMA5Q96PV4 448 aa21.41■■□□□ 1.02
HOXA9-202ENST00000396345 NT5C3AQ9H0P0 336 aa21.41■■□□□ 1.02
HOXA9-202ENST00000396345 DNM3Q9UQ16 869 aa21.41■■□□□ 1.02
HOXA9-202ENST00000396345 TANC1Q9C0D5 1861 aa21.41■■□□□ 1.02
HOXA9-202ENST00000396345 CUTAO60888 179 aa21.4■■□□□ 1.02
HOXA9-202ENST00000396345 RFC2P35250 354 aa21.4■■□□□ 1.02
HOXA9-202ENST00000396345 ME1P48163 572 aa21.4■■□□□ 1.02
HOXA9-202ENST00000396345 DNM2P50570 870 aa21.4■■□□□ 1.02
HOXA9-202ENST00000396345 MRPS6P82932 125 aaKnown RBP21.4■■□□□ 1.02
HOXA9-202ENST00000396345 GRB10Q13322 594 aa21.4■■□□□ 1.02
HOXA9-202ENST00000396345 PPIGQ13427 754 aaKnown RBP eCLIP21.4■■□□□ 1.02
HOXA9-202ENST00000396345 FAM26DQ5JW98 314 aa21.4■■□□□ 1.02
HOXA9-202ENST00000396345 IER5Q5VY09 327 aa21.4■■□□□ 1.02
HOXA9-202ENST00000396345 KCTD17Q8N5Z5 321 aa21.4■■□□□ 1.02
HOXA9-202ENST00000396345 RASSF8Q8NHQ8 419 aa21.4■■□□□ 1.02
HOXA9-202ENST00000396345 SYMPKQ92797 1274 aaKnown RBP21.4■■□□□ 1.02
HOXA9-202ENST00000396345 EPSTI1Q96J88 318 aa21.4■■□□□ 1.02
HOXA9-202ENST00000396345 MAP7D2Q96T17 732 aa21.4■■□□□ 1.02
HOXA9-202ENST00000396345 PLIN2Q99541 437 aa21.4■■□□□ 1.02
HOXA9-202ENST00000396345 CCSER1Q9C0I3 900 aa21.4■■□□□ 1.02
HOXA9-202ENST00000396345 DHX33Q9H6R0 707 aaKnown RBP21.4■■□□□ 1.02
HOXA9-202ENST00000396345 CHMP5Q9NZZ3 219 aa21.4■■□□□ 1.02
HOXA9-202ENST00000396345 AKT3Q9Y243 479 aa21.4■■□□□ 1.02
HOXA9-202ENST00000396345 TCHHQ07283 1943 aa21.39■■□□□ 1.02
HOXA9-202ENST00000396345 ARHGEF35A5YM69 484 aa21.39■■□□□ 1.01
HOXA9-202ENST00000396345 E9PMD0 336 aa21.39■■□□□ 1.01
HOXA9-202ENST00000396345 PARNO95453 639 aaKnown RBP21.39■■□□□ 1.01
HOXA9-202ENST00000396345 TXLNAP40222 546 aa21.39■■□□□ 1.01
HOXA9-202ENST00000396345 TMEM62Q0P6H9 643 aa21.39■■□□□ 1.01
HOXA9-202ENST00000396345 EMC2Q15006 297 aa21.39■■□□□ 1.01
HOXA9-202ENST00000396345 TMEM119Q4V9L6 283 aa21.39■■□□□ 1.01
HOXA9-202ENST00000396345 USP49Q70CQ1 688 aa21.39■■□□□ 1.01
HOXA9-202ENST00000396345 LEO1Q8WVC0 666 aaPredicted RBP21.39■■□□□ 1.01
HOXA9-202ENST00000396345 SPATA32Q96LK8 384 aa21.39■■□□□ 1.01
HOXA9-202ENST00000396345 GDF15Q99988 308 aa21.39■■□□□ 1.01
HOXA9-202ENST00000396345 BHMT2Q9H2M3 363 aa21.39■■□□□ 1.01
HOXA9-202ENST00000396345 BMP2KQ9NSY1 1161 aaPredicted RBP21.39■■□□□ 1.01
HOXA9-202ENST00000396345 SCN5AQ14524 2016 aa21.38■■□□□ 1.01
HOXA9-202ENST00000396345 M0QZ92 97 aa21.38■■□□□ 1.01
HOXA9-202ENST00000396345 DGAT1O75907 488 aa21.38■■□□□ 1.01
HOXA9-202ENST00000396345 EYA4O95677 639 aa21.38■■□□□ 1.01
HOXA9-202ENST00000396345 CHRNA1P02708 482 aa21.38■■□□□ 1.01
HOXA9-202ENST00000396345 VTNP04004 478 aa21.38■■□□□ 1.01
HOXA9-202ENST00000396345 MGAT3Q09327 533 aa21.38■■□□□ 1.01
HOXA9-202ENST00000396345 MKRN4PQ13434 485 aaPredicted RBP21.38■■□□□ 1.01
HOXA9-202ENST00000396345 KARSQ15046 597 aaKnown RBP21.38■■□□□ 1.01
HOXA9-202ENST00000396345 KCNK18Q7Z418 384 aa21.38■■□□□ 1.01
HOXA9-202ENST00000396345 MTRQ99707 1265 aa21.38■■□□□ 1.01
HOXA9-202ENST00000396345 SCAND2PQ9GZW5 306 aaPredicted RBP21.38■■□□□ 1.01
HOXA9-202ENST00000396345 ATP6V0A4Q9HBG4 840 aa21.38■■□□□ 1.01
HOXA9-202ENST00000396345 IL23AQ9NPF7 189 aa21.38■■□□□ 1.01
HOXA9-202ENST00000396345 CCDC39Q9UFE4 941 aa21.38■■□□□ 1.01
HOXA9-202ENST00000396345 PCDHA7Q9UN72 937 aa21.38■■□□□ 1.01
HOXA9-202ENST00000396345 TRPV2Q9Y5S1 764 aa21.38■■□□□ 1.01
HOXA9-202ENST00000396345 CDY2AQ9Y6F7 541 aa21.38■■□□□ 1.01
HOXA9-202ENST00000396345 LOXHD1Q8IVV2 1947 aa21.37■■□□□ 1.01
HOXA9-202ENST00000396345 GAS2O43903 313 aaKnown RBP21.37■■□□□ 1.01
HOXA9-202ENST00000396345 USO1O60763 962 aaKnown RBP21.37■■□□□ 1.01
HOXA9-202ENST00000396345 DRP2Q13474 957 aa21.37■■□□□ 1.01
HOXA9-202ENST00000396345 MBTPS1Q14703 1052 aa21.37■■□□□ 1.01
HOXA9-202ENST00000396345 HABP4Q5JVS0 413 aaKnown RBP21.37■■□□□ 1.01
HOXA9-202ENST00000396345 AXDND1Q5T1B0 1012 aaPredicted RBP21.37■■□□□ 1.01
HOXA9-202ENST00000396345 PADI6Q6TGC4 694 aa21.37■■□□□ 1.01
HOXA9-202ENST00000396345 DEFB128Q7Z7B8 93 aa21.37■■□□□ 1.01
HOXA9-202ENST00000396345 RPUSD2Q8IZ73 545 aaKnown RBP21.37■■□□□ 1.01
HOXA9-202ENST00000396345 TMEM143Q96AN5 459 aa21.37■■□□□ 1.01
HOXA9-202ENST00000396345 CELF4Q9BZC1 486 aaKnown RBP21.37■■□□□ 1.01
HOXA9-202ENST00000396345 UBE2OQ9C0C9 1292 aaKnown RBP21.37■■□□□ 1.01
HOXA9-202ENST00000396345 SUCLA2Q9P2R7 463 aaPredicted RBP21.37■■□□□ 1.01
HOXA9-202ENST00000396345 NBNO60934 754 aa21.36■■□□□ 1.01
HOXA9-202ENST00000396345 ACRP10323 421 aa21.36■■□□□ 1.01
HOXA9-202ENST00000396345 PLCG1P19174 1290 aa21.36■■□□□ 1.01
HOXA9-202ENST00000396345 GPNMBQ14956 572 aa21.36■■□□□ 1.01
HOXA9-202ENST00000396345 TCP11Q8WWU5 503 aa21.36■■□□□ 1.01
HOXA9-202ENST00000396345 PPP1R16BQ96T49 567 aa21.36■■□□□ 1.01
HOXA9-202ENST00000396345 XPNPEP1Q9NQW7 623 aa21.36■■□□□ 1.01
HOXA9-202ENST00000396345 EPHB4P54760 987 aa21.35■■□□□ 1.01
HOXA9-202ENST00000396345 NLRP11P59045 1033 aaKnown RBP21.35■■□□□ 1.01
HOXA9-202ENST00000396345 CDC42EP1Q00587 391 aa21.35■■□□□ 1.01
HOXA9-202ENST00000396345 KIZQ2M2Z5 673 aa21.35■■□□□ 1.01
HOXA9-202ENST00000396345 CHRDL2Q6WN34 429 aa21.35■■□□□ 1.01
HOXA9-202ENST00000396345 ZNF710Q8N1W2 664 aa21.35■■□□□ 1.01
HOXA9-202ENST00000396345 GINS2Q9Y248 185 aa21.35■■□□□ 1.01
HOXA9-202ENST00000396345 GPR32O75388 356 aa21.34■■□□□ 1.01
HOXA9-202ENST00000396345 CXCL10P02778 98 aa21.34■■□□□ 1.01
HOXA9-202ENST00000396345 SSBP05455 408 aaKnown RBP eCLIP21.34■■□□□ 1.01
HOXA9-202ENST00000396345 PFKMP08237 780 aa21.34■■□□□ 1.01
HOXA9-202ENST00000396345 PLA2G4BP0C869 781 aa21.34■■□□□ 1.01
HOXA9-202ENST00000396345 CYP11B2P19099 503 aa21.34■■□□□ 1.01
HOXA9-202ENST00000396345 BMP8BP34820 402 aa21.34■■□□□ 1.01
HOXA9-202ENST00000396345 RRAGBQ5VZM2 374 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms