RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 UBE2SQ16763 222 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 C11orf57Q6ZUT1 292 aaPredicted RBP5.84□□□□□ -1.47
VPS13C-204ENST00000395898 ZBTB33Q86T24 672 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 PIGBQ92521 554 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 MTRQ99707 1265 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 ADAMTS1Q9UHI8 967 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 ANGPTL2Q9UKU9 493 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 CD58P19256 250 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 PRELPP51888 382 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 ZBTB17Q13105 803 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 TTLL4Q14679 1199 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 NAALADL2Q58DX5 795 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 MINPP1Q9UNW1 487 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 SKIP12755 728 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 MARK3P27448 753 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 CDR2Q01850 454 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 OCRLQ01968 901 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 DHX9Q08211 1270 aaKnown RBP5.84□□□□□ -1.47
VPS13C-204ENST00000395898 TMEM35BQ8NCS4 154 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 UHMK1Q8TAS1 419 aaKnown RBP5.84□□□□□ -1.47
VPS13C-204ENST00000395898 HERC5Q9UII4 1024 aaKnown RBP5.84□□□□□ -1.47
VPS13C-204ENST00000395898 H7C1W4 665 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 PRKAB2O43741 272 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 KRT7P08729 469 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 GCKP35557 465 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 CRKP46108 304 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 OR6B2Q6IFH4 312 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 MIGA2Q7L4E1 593 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 BARHL2Q9NY43 387 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 ALKQ9UM73 1620 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 E9PCH4 1651 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 OSTNP61366 133 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 ZNF699Q32M78 642 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 C2orf69Q8N8R5 385 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 HSPH1Q92598 858 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 TRAIPQ9BWF2 469 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 SLC13A4Q9UKG4 626 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 USP17L5A8MUK1 530 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 USP17L10C9JJH3 530 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 GSTA4O15217 222 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 GGPS1O95749 300 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 NCF2P19878 526 aaPredicted RBP5.84□□□□□ -1.47
VPS13C-204ENST00000395898 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.84□□□□□ -1.47
VPS13C-204ENST00000395898 GIPC2Q8TF65 315 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 ATP6V0A4Q9HBG4 840 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 ARHGEF40Q8TER5 1519 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 AP3B1O00203 1094 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 KRT38O76015 456 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 FTCDO95954 541 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 HOXA13P31271 388 aaPredicted RBP5.84□□□□□ -1.47
VPS13C-204ENST00000395898 NNMTP40261 264 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 USP11P51784 963 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 CASP8Q14790 479 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 FSCBQ5H9T9 825 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 SUSD4Q5VX71 490 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 RNF219Q5W0B1 726 aaPredicted RBP5.84□□□□□ -1.47
VPS13C-204ENST00000395898 OR6B3Q8NGW1 331 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 URGCPQ8TCY9 931 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 MRPL46Q9H2W6 279 aaKnown RBP5.84□□□□□ -1.47
VPS13C-204ENST00000395898 SPTLC3Q9NUV7 552 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 PFASO15067 1338 aa5.84□□□□□ -1.48
VPS13C-204ENST00000395898 FAM170AA1A519 330 aa5.84□□□□□ -1.48
VPS13C-204ENST00000395898 TOM1L1O75674 476 aa5.84□□□□□ -1.48
VPS13C-204ENST00000395898 ZFXP17010 805 aaPredicted RBP5.84□□□□□ -1.48
VPS13C-204ENST00000395898 EIF2AK2P19525 551 aaKnown RBP5.84□□□□□ -1.48
VPS13C-204ENST00000395898 TSPY1Q01534 308 aa5.84□□□□□ -1.48
VPS13C-204ENST00000395898 KNOP1Q1ED39 458 aaKnown RBP5.84□□□□□ -1.48
VPS13C-204ENST00000395898 RCSD1Q6JBY9 416 aa5.84□□□□□ -1.48
VPS13C-204ENST00000395898 BEST2Q8NFU1 509 aa5.84□□□□□ -1.48
VPS13C-204ENST00000395898 DACT3Q96B18 629 aaPredicted RBP5.84□□□□□ -1.48
VPS13C-204ENST00000395898 FAF2Q96CS3 445 aa5.84□□□□□ -1.48
VPS13C-204ENST00000395898 TIPINQ9BVW5 301 aa5.84□□□□□ -1.48
VPS13C-204ENST00000395898 MRPL4Q9BYD3 311 aaKnown RBP5.84□□□□□ -1.48
VPS13C-204ENST00000395898 ADAM22Q9P0K1 906 aa5.84□□□□□ -1.48
VPS13C-204ENST00000395898 AP3M2P53677 418 aa5.84□□□□□ -1.48
VPS13C-204ENST00000395898 CDC42EP1Q00587 391 aa5.84□□□□□ -1.48
VPS13C-204ENST00000395898 KRT31Q15323 416 aa5.84□□□□□ -1.48
VPS13C-204ENST00000395898 TRIM67Q6ZTA4 783 aa5.84□□□□□ -1.48
VPS13C-204ENST00000395898 NSUN6Q8TEA1 469 aaKnown RBP5.84□□□□□ -1.48
VPS13C-204ENST00000395898 SUN2Q9UH99 717 aa5.84□□□□□ -1.48
VPS13C-204ENST00000395898 ZC3H13Q5T200 1668 aaKnown RBP5.83□□□□□ -1.48
VPS13C-204ENST00000395898 KPNA7A9QM74 516 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 RPS6KA4O75676 772 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 PLS3P13797 630 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 LIG3P49916 1009 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 IL1RL1Q01638 556 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 TAF11Q15544 211 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 CDO1Q16878 200 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 KIAA1755Q5JYT7 1200 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 GRAMD1CQ8IYS0 662 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 PDCD7Q8N8D1 485 aaKnown RBP5.83□□□□□ -1.48
VPS13C-204ENST00000395898 KLHL8Q9P2G9 620 aaPredicted RBP5.83□□□□□ -1.48
VPS13C-204ENST00000395898 SCOCQ9UIL1 159 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.83□□□□□ -1.48
VPS13C-204ENST00000395898 BCORL1Q5H9F3 1711 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 CDC25AP30304 524 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 QARSP47897 775 aaKnown RBP5.83□□□□□ -1.48
VPS13C-204ENST00000395898 KRT80Q6KB66 452 aa5.83□□□□□ -1.48
VPS13C-204ENST00000395898 RWDD4Q6NW29 188 aaKnown RBP5.83□□□□□ -1.48
VPS13C-204ENST00000395898 PIGOQ8TEQ8 1089 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms