RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 NUGGCQ68CJ6 796 aa20.47■□□□□ 0.87
HOXC6-202ENST00000394331 TXLNGYQ9BZA5 131 aa20.47■□□□□ 0.87
HOXC6-202ENST00000394331 NEUROG2Q9H2A3 272 aa20.47■□□□□ 0.87
HOXC6-202ENST00000394331 BUB1O43683 1085 aa20.47■□□□□ 0.87
HOXC6-202ENST00000394331 SNX3O60493 162 aa20.47■□□□□ 0.87
HOXC6-202ENST00000394331 KRT16P08779 473 aa20.47■□□□□ 0.87
HOXC6-202ENST00000394331 PDE6CP51160 858 aa20.47■□□□□ 0.87
HOXC6-202ENST00000394331 COBLL1Q53SF7 1204 aa20.47■□□□□ 0.87
HOXC6-202ENST00000394331 CROCCP2Q86T23 111 aa20.47■□□□□ 0.87
HOXC6-202ENST00000394331 MDM1Q8TC05 714 aa20.47■□□□□ 0.87
HOXC6-202ENST00000394331 RBM41Q96IZ5 413 aaKnown RBP20.47■□□□□ 0.87
HOXC6-202ENST00000394331 TRAPPC9Q96Q05 1148 aa20.47■□□□□ 0.87
HOXC6-202ENST00000394331 CD209Q9NNX6 404 aa20.47■□□□□ 0.87
HOXC6-202ENST00000394331 LMCD1Q9NZU5 365 aa20.47■□□□□ 0.87
HOXC6-202ENST00000394331 PYGLP06737 847 aa20.46■□□□□ 0.87
HOXC6-202ENST00000394331 GOLGA8HP0CJ92 632 aa20.46■□□□□ 0.87
HOXC6-202ENST00000394331 SETSIPP0DME0 302 aa20.46■□□□□ 0.87
HOXC6-202ENST00000394331 ATP2B4P23634 1241 aa20.46■□□□□ 0.87
HOXC6-202ENST00000394331 GBP1P32455 592 aa20.46■□□□□ 0.87
HOXC6-202ENST00000394331 SLC1A4P43007 532 aa20.46■□□□□ 0.87
HOXC6-202ENST00000394331 SOGA3Q5TF21 947 aa20.46■□□□□ 0.87
HOXC6-202ENST00000394331 CABP7Q86V35 215 aa20.46■□□□□ 0.87
HOXC6-202ENST00000394331 SLF2Q8IX21 1173 aa20.46■□□□□ 0.87
HOXC6-202ENST00000394331 CFAP61Q8NHU2 1237 aa20.46■□□□□ 0.87
HOXC6-202ENST00000394331 PRCCQ92733 491 aaPredicted RBP20.46■□□□□ 0.87
HOXC6-202ENST00000394331 RPGRQ92834 1020 aaKnown RBP20.46■□□□□ 0.87
HOXC6-202ENST00000394331 ADAM7Q9H2U9 754 aa20.46■□□□□ 0.87
HOXC6-202ENST00000394331 SLITRK6Q9H5Y7 841 aa20.46■□□□□ 0.87
HOXC6-202ENST00000394331 SEC63Q9UGP8 760 aaKnown RBP20.46■□□□□ 0.87
HOXC6-202ENST00000394331 MYH1P12882 1939 aa20.46■□□□□ 0.87
HOXC6-202ENST00000394331 BTNL10A8MVZ5 291 aa20.46■□□□□ 0.87
HOXC6-202ENST00000394331 ORC2Q13416 577 aaPredicted RBP20.46■□□□□ 0.87
HOXC6-202ENST00000394331 KLHL7Q8IXQ5 586 aa20.46■□□□□ 0.87
HOXC6-202ENST00000394331 BAP1Q92560 729 aa20.46■□□□□ 0.87
HOXC6-202ENST00000394331 SYN2Q92777 582 aaPredicted RBP20.46■□□□□ 0.87
HOXC6-202ENST00000394331 ELAC2Q9BQ52 826 aaKnown RBP20.46■□□□□ 0.87
HOXC6-202ENST00000394331 FAM114A2Q9NRY5 505 aa20.46■□□□□ 0.87
HOXC6-202ENST00000394331 SMCO2A6NFE2 343 aa20.45■□□□□ 0.86
HOXC6-202ENST00000394331 PPP1R15BQ5SWA1 713 aa20.45■□□□□ 0.86
HOXC6-202ENST00000394331 PNMA2Q9UL42 364 aa20.45■□□□□ 0.86
HOXC6-202ENST00000394331 C2CD2Q9Y426 696 aa20.45■□□□□ 0.86
HOXC6-202ENST00000394331 TOM1O60784 492 aa20.45■□□□□ 0.86
HOXC6-202ENST00000394331 HIP1RO75146 1068 aa20.45■□□□□ 0.86
HOXC6-202ENST00000394331 ACADSP16219 412 aa20.45■□□□□ 0.86
HOXC6-202ENST00000394331 NEK8Q86SG6 692 aa20.45■□□□□ 0.86
HOXC6-202ENST00000394331 USP15Q9Y4E8 981 aaPredicted RBP20.45■□□□□ 0.86
HOXC6-202ENST00000394331 TNRC6CQ9HCJ0 1690 aaKnown RBP20.45■□□□□ 0.86
HOXC6-202ENST00000394331 LRRC53A6NM62 1247 aa20.44■□□□□ 0.86
HOXC6-202ENST00000394331 KIF4AO95239 1232 aa20.44■□□□□ 0.86
HOXC6-202ENST00000394331 CCNB1P14635 433 aa20.44■□□□□ 0.86
HOXC6-202ENST00000394331 GPSM2P81274 684 aa20.44■□□□□ 0.86
HOXC6-202ENST00000394331 PLS1Q14651 629 aa20.44■□□□□ 0.86
HOXC6-202ENST00000394331 LETM2Q2VYF4 491 aa20.44■□□□□ 0.86
HOXC6-202ENST00000394331 PDXDC1Q6P996 788 aa20.44■□□□□ 0.86
HOXC6-202ENST00000394331 TAF4BQ92750 862 aa20.44■□□□□ 0.86
HOXC6-202ENST00000394331 FAM163AQ96GL9 167 aaPredicted RBP20.44■□□□□ 0.86
HOXC6-202ENST00000394331 PLIN2Q99541 437 aa20.44■□□□□ 0.86
HOXC6-202ENST00000394331 CCNT1O60563 726 aaKnown RBP20.44■□□□□ 0.86
HOXC6-202ENST00000394331 UFL1O94874 794 aa20.44■□□□□ 0.86
HOXC6-202ENST00000394331 IL1R1P14778 569 aa20.44■□□□□ 0.86
HOXC6-202ENST00000394331 PLCG1P19174 1290 aa20.44■□□□□ 0.86
HOXC6-202ENST00000394331 AMPD3Q01432 767 aa20.44■□□□□ 0.86
HOXC6-202ENST00000394331 HGSNATQ68CP4 663 aa20.44■□□□□ 0.86
HOXC6-202ENST00000394331 ANKRD13CQ8N6S4 541 aa20.44■□□□□ 0.86
HOXC6-202ENST00000394331 FBF1Q8TES7 1133 aa20.44■□□□□ 0.86
HOXC6-202ENST00000394331 RAB3IPQ96QF0 476 aaPredicted RBP20.44■□□□□ 0.86
HOXC6-202ENST00000394331 TRIM4Q9C037 500 aa20.44■□□□□ 0.86
HOXC6-202ENST00000394331 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.44■□□□□ 0.86
HOXC6-202ENST00000394331 FLT1P17948 1338 aa20.44■□□□□ 0.86
HOXC6-202ENST00000394331 GFPT1Q06210 699 aaPredicted RBP20.43■□□□□ 0.86
HOXC6-202ENST00000394331 ADAM9Q13443 819 aa20.43■□□□□ 0.86
HOXC6-202ENST00000394331 VWA3BQ502W6 1294 aa20.43■□□□□ 0.86
HOXC6-202ENST00000394331 SESTD1Q86VW0 696 aa20.43■□□□□ 0.86
HOXC6-202ENST00000394331 NCAPG2Q86XI2 1143 aa20.43■□□□□ 0.86
HOXC6-202ENST00000394331 IFT43Q96FT9 208 aa20.43■□□□□ 0.86
HOXC6-202ENST00000394331 GGA1Q9UJY5 639 aa20.43■□□□□ 0.86
HOXC6-202ENST00000394331 BTAF1O14981 1849 aa20.43■□□□□ 0.86
HOXC6-202ENST00000394331 TXNRD1Q16881 649 aa20.43■□□□□ 0.86
HOXC6-202ENST00000394331 LRRC23Q53EV4 343 aaPredicted RBP20.43■□□□□ 0.86
HOXC6-202ENST00000394331 GPR101Q96P66 508 aaPredicted RBP20.43■□□□□ 0.86
HOXC6-202ENST00000394331 C7orf25Q9BPX7 421 aa20.43■□□□□ 0.86
HOXC6-202ENST00000394331 ARHGEF10LQ9HCE6 1279 aa20.43■□□□□ 0.86
HOXC6-202ENST00000394331 SNED1Q8TER0 1413 aa20.43■□□□□ 0.86
HOXC6-202ENST00000394331 ESYT2A0FGR8 921 aa20.43■□□□□ 0.86
HOXC6-202ENST00000394331 FTCDO95954 541 aa20.43■□□□□ 0.86
HOXC6-202ENST00000394331 FLT3P36888 993 aa20.43■□□□□ 0.86
HOXC6-202ENST00000394331 TRIM9Q9C026 710 aa20.43■□□□□ 0.86
HOXC6-202ENST00000394331 INTS9Q9NV88 658 aaKnown RBP20.43■□□□□ 0.86
HOXC6-202ENST00000394331 NAV1Q8NEY1 1877 aa20.42■□□□□ 0.86
HOXC6-202ENST00000394331 SPDYE5A6NIY4 337 aa20.42■□□□□ 0.86
HOXC6-202ENST00000394331 CCDC169A6NNP5 214 aa20.42■□□□□ 0.86
HOXC6-202ENST00000394331 hCG_1984214I3L0E3 225 aa20.42■□□□□ 0.86
HOXC6-202ENST00000394331 SUN1O94901 812 aa20.42■□□□□ 0.86
HOXC6-202ENST00000394331 GJB6O95452 261 aa20.42■□□□□ 0.86
HOXC6-202ENST00000394331 KLC1Q07866 573 aa20.42■□□□□ 0.86
HOXC6-202ENST00000394331 DHX9Q08211 1270 aaKnown RBP20.42■□□□□ 0.86
HOXC6-202ENST00000394331 USP17L2Q6R6M4 530 aa20.42■□□□□ 0.86
HOXC6-202ENST00000394331 ZNF713Q8N859 430 aaPredicted RBP20.42■□□□□ 0.86
HOXC6-202ENST00000394331 CERKQ8TCT0 537 aa20.42■□□□□ 0.86
HOXC6-202ENST00000394331 SH3TC2Q8TF17 1288 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms