RNA–Protein interactions for RNA: ENST00000393888.1

CNP-201, Transcript of 2',3'-cyclic nucleotide 3' phosphodiesterase, humanhuman

TSL 1 (best) BASIC

Gene CNP, Length 2,583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNP-201ENST00000393888 HES6Q96HZ4 224 aa17.84■□□□□ 0.45
CNP-201ENST00000393888 NLRP3Q96P20 1036 aa17.84■□□□□ 0.45
CNP-201ENST00000393888 LRRC27Q9C0I9 530 aa17.84■□□□□ 0.45
CNP-201ENST00000393888 ZDHHC18Q9NUE0 388 aa17.84■□□□□ 0.45
CNP-201ENST00000393888 DBR1Q9UK59 544 aaKnown RBP17.84■□□□□ 0.45
CNP-201ENST00000393888 AMFRQ9UKV5 643 aa17.84■□□□□ 0.45
CNP-201ENST00000393888 NRAPQ86VF7 1730 aa17.83■□□□□ 0.44
CNP-201ENST00000393888 EIF4E1BA6NMX2 242 aaKnown RBP17.83■□□□□ 0.44
CNP-201ENST00000393888 PLA2G4BP0C869 781 aa17.83■□□□□ 0.44
CNP-201ENST00000393888 MMP13P45452 471 aa17.83■□□□□ 0.44
CNP-201ENST00000393888 ADCY7P51828 1080 aa17.83■□□□□ 0.44
CNP-201ENST00000393888 CCNHP51946 323 aaPredicted RBP17.83■□□□□ 0.44
CNP-201ENST00000393888 CCDC65Q8IXS2 484 aa17.83■□□□□ 0.44
CNP-201ENST00000393888 SEMA4AQ9H3S1 761 aa17.83■□□□□ 0.44
CNP-201ENST00000393888 DDX25Q9UHL0 483 aaKnown RBP17.83■□□□□ 0.44
CNP-201ENST00000393888 RTCBQ9Y3I0 505 aaKnown RBP17.83■□□□□ 0.44
CNP-201ENST00000393888 DAAM1Q9Y4D1 1078 aa17.83■□□□□ 0.44
CNP-201ENST00000393888 ASAP2O43150 1006 aa17.83■□□□□ 0.44
CNP-201ENST00000393888 EIF3BP55884 814 aaKnown RBP17.83■□□□□ 0.44
CNP-201ENST00000393888 MARSP56192 900 aaKnown RBP17.83■□□□□ 0.44
CNP-201ENST00000393888 EIF6P56537 245 aaKnown RBP17.83■□□□□ 0.44
CNP-201ENST00000393888 FAM98CQ17RN3 349 aaKnown RBP17.83■□□□□ 0.44
CNP-201ENST00000393888 NEK9Q8TD19 979 aa17.83■□□□□ 0.44
CNP-201ENST00000393888 LMBR1Q8WVP7 490 aa17.83■□□□□ 0.44
CNP-201ENST00000393888 CEP95Q96GE4 821 aa17.83■□□□□ 0.44
CNP-201ENST00000393888 BCAS3Q9H6U6 928 aa17.83■□□□□ 0.44
CNP-201ENST00000393888 SPATA31A5Q5VU36 1347 aa17.82■□□□□ 0.44
CNP-201ENST00000393888 SPATA31A7Q8IWB4 1347 aa17.82■□□□□ 0.44
CNP-201ENST00000393888 IGSF9BQ9UPX0 1349 aa17.82■□□□□ 0.44
CNP-201ENST00000393888 KRT13P13646 458 aa17.82■□□□□ 0.44
CNP-201ENST00000393888 FGFR4P22455 802 aa17.82■□□□□ 0.44
CNP-201ENST00000393888 SPICE1Q8N0Z3 855 aa17.82■□□□□ 0.44
CNP-201ENST00000393888 SLC35G2Q8TBE7 412 aa17.82■□□□□ 0.44
CNP-201ENST00000393888 ERP44Q9BS26 406 aa17.82■□□□□ 0.44
CNP-201ENST00000393888 PABPC3Q9H361 631 aaKnown RBP17.82■□□□□ 0.44
CNP-201ENST00000393888 EBF2Q9HAK2 575 aa17.82■□□□□ 0.44
CNP-201ENST00000393888 MLXIPLQ9NP71 852 aa17.82■□□□□ 0.44
CNP-201ENST00000393888 TMOD4Q9NZQ9 345 aa17.82■□□□□ 0.44
CNP-201ENST00000393888 ARMCX3Q9UH62 379 aaPredicted RBP17.82■□□□□ 0.44
CNP-201ENST00000393888 C15orf41Q9Y2V0 281 aa17.82■□□□□ 0.44
CNP-201ENST00000393888 DIAPH2O60879 1101 aa17.82■□□□□ 0.44
CNP-201ENST00000393888 AFPP02771 609 aaKnown RBP17.82■□□□□ 0.44
CNP-201ENST00000393888 STAT3P40763 770 aa17.82■□□□□ 0.44
CNP-201ENST00000393888 KLRC3Q07444 240 aa17.82■□□□□ 0.44
CNP-201ENST00000393888 MKRN4PQ13434 485 aaPredicted RBP17.82■□□□□ 0.44
CNP-201ENST00000393888 ITPK1Q13572 414 aa17.82■□□□□ 0.44
CNP-201ENST00000393888 SPTY2D1Q68D10 685 aaPredicted RBP17.82■□□□□ 0.44
CNP-201ENST00000393888 DUPD1Q68J44 220 aa17.82■□□□□ 0.44
CNP-201ENST00000393888 GLYCTKQ8IVS8 523 aa17.82■□□□□ 0.44
CNP-201ENST00000393888 LNX1Q8TBB1 728 aaPredicted RBP17.82■□□□□ 0.44
CNP-201ENST00000393888 GPCPD1Q9NPB8 672 aa17.82■□□□□ 0.44
CNP-201ENST00000393888 PCDHA12Q9UN75 941 aa17.82■□□□□ 0.44
CNP-201ENST00000393888 STK38LQ9Y2H1 464 aa17.82■□□□□ 0.44
CNP-201ENST00000393888 FOXO6A8MYZ6 492 aa17.81■□□□□ 0.44
CNP-201ENST00000393888 CDK8P49336 464 aa17.81■□□□□ 0.44
CNP-201ENST00000393888 CASP4P49662 377 aa17.81■□□□□ 0.44
CNP-201ENST00000393888 ALDH5A1P51649 535 aaPredicted RBP17.81■□□□□ 0.44
CNP-201ENST00000393888 ITIH4Q14624 930 aa17.81■□□□□ 0.44
CNP-201ENST00000393888 OTUD6AQ7L8S5 288 aa17.81■□□□□ 0.44
CNP-201ENST00000393888 TAX1BP1Q86VP1 789 aa17.81■□□□□ 0.44
CNP-201ENST00000393888 FMNL3Q8IVF7 1028 aa17.81■□□□□ 0.44
CNP-201ENST00000393888 ZNF622Q969S3 477 aaKnown RBP eCLIP17.81■□□□□ 0.44
CNP-201ENST00000393888 C18orf8Q96DM3 657 aa17.81■□□□□ 0.44
CNP-201ENST00000393888 RAB17Q9H0T7 212 aa17.81■□□□□ 0.44
CNP-201ENST00000393888 BZW2Q9Y6E2 419 aaKnown RBP17.81■□□□□ 0.44
CNP-201ENST00000393888 DDX3YO15523 660 aaKnown RBP17.81■□□□□ 0.44
CNP-201ENST00000393888 SATB1Q01826 763 aa17.81■□□□□ 0.44
CNP-201ENST00000393888 ZDHHC24Q6UX98 284 aa17.81■□□□□ 0.44
CNP-201ENST00000393888 CLEC10AQ8IUN9 316 aa17.81■□□□□ 0.44
CNP-201ENST00000393888 SPDL1Q96EA4 605 aa17.81■□□□□ 0.44
CNP-201ENST00000393888 HOOK2Q96ED9 719 aa17.81■□□□□ 0.44
CNP-201ENST00000393888 IKZF4Q9H2S9 585 aa17.81■□□□□ 0.44
CNP-201ENST00000393888 ECT2Q9H8V3 914 aa17.81■□□□□ 0.44
CNP-201ENST00000393888 IGF2BP3O00425 579 aaKnown RBP eCLIP17.8■□□□□ 0.442e-6■□□□□ 10.1
CNP-201ENST00000393888 CLIC2O15247 247 aa17.8■□□□□ 0.44
CNP-201ENST00000393888 RARAP10276 462 aa17.8■□□□□ 0.44
CNP-201ENST00000393888 NQO1P15559 274 aaKnown RBP17.8■□□□□ 0.44
CNP-201ENST00000393888 CYP11B2P19099 503 aa17.8■□□□□ 0.44
CNP-201ENST00000393888 PEX19P40855 299 aa17.8■□□□□ 0.44
CNP-201ENST00000393888 PTENP60484 403 aa17.8■□□□□ 0.44
CNP-201ENST00000393888 ARSHQ5FYA8 562 aa17.8■□□□□ 0.44
CNP-201ENST00000393888 BZW1Q7L1Q6 419 aaKnown RBP17.8■□□□□ 0.44
CNP-201ENST00000393888 JAMLQ86YT9 394 aa17.8■□□□□ 0.44
CNP-201ENST00000393888 SYCE1Q8N0S2 351 aa17.8■□□□□ 0.44
CNP-201ENST00000393888 ZNF570Q96NI8 536 aa17.8■□□□□ 0.44
CNP-201ENST00000393888 SIX2Q9NPC8 291 aa17.8■□□□□ 0.44
CNP-201ENST00000393888 TRIM33Q9UPN9 1127 aa17.8■□□□□ 0.44
CNP-201ENST00000393888 TRPC6Q9Y210 931 aa17.8■□□□□ 0.44
CNP-201ENST00000393888 THRAP3Q9Y2W1 955 aaKnown RBP17.8■□□□□ 0.44
CNP-201ENST00000393888 RPTORQ8N122 1335 aa17.8■□□□□ 0.44
CNP-201ENST00000393888 AKAP3O75969 853 aa17.8■□□□□ 0.44
CNP-201ENST00000393888 LDHBP07195 334 aaKnown RBP17.8■□□□□ 0.44
CNP-201ENST00000393888 XRCC5P13010 732 aaKnown RBP17.8■□□□□ 0.44
CNP-201ENST00000393888 NCALDP61601 193 aa17.8■□□□□ 0.44
CNP-201ENST00000393888 KIAA1755Q5JYT7 1200 aa17.8■□□□□ 0.44
CNP-201ENST00000393888 LRRC47Q8N1G4 583 aaKnown RBP17.8■□□□□ 0.44
CNP-201ENST00000393888 SEPT11Q9NVA2 429 aaKnown RBP17.8■□□□□ 0.44
CNP-201ENST00000393888 GCNT4Q9P109 453 aa17.8■□□□□ 0.44
CNP-201ENST00000393888 POTEFA5A3E0 1075 aa17.79■□□□□ 0.44
CNP-201ENST00000393888 CCDC169A6NNP5 214 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms