RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 CCDC43Q96MW1 224 aaKnown RBP16.47■□□□□ 0.23
MKS1-202ENST00000393119 PANX2Q96RD6 677 aa16.47■□□□□ 0.23
MKS1-202ENST00000393119 SEPT9Q9UHD8 586 aaPredicted RBP16.47■□□□□ 0.23
MKS1-202ENST00000393119 TRAF3IP3Q9Y228 551 aa16.47■□□□□ 0.23
MKS1-202ENST00000393119 PFASO15067 1338 aa16.47■□□□□ 0.23
MKS1-202ENST00000393119 A0A1W2PQC6 194 aa16.46■□□□□ 0.23
MKS1-202ENST00000393119 ARHGAP6O43182 974 aa16.46■□□□□ 0.23
MKS1-202ENST00000393119 PRKCEQ02156 737 aa16.46■□□□□ 0.23
MKS1-202ENST00000393119 TRIM50Q86XT4 487 aa16.46■□□□□ 0.23
MKS1-202ENST00000393119 IWS1Q96ST2 819 aa16.46■□□□□ 0.23
MKS1-202ENST00000393119 PCYT2Q99447 389 aa16.46■□□□□ 0.23
MKS1-202ENST00000393119 FBXO40Q9UH90 709 aa16.46■□□□□ 0.23
MKS1-202ENST00000393119 DBR1Q9UK59 544 aaKnown RBP16.46■□□□□ 0.23
MKS1-202ENST00000393119 SCN4AP35499 1836 aa16.46■□□□□ 0.23
MKS1-202ENST00000393119 PLEKP08567 350 aaPredicted RBP16.46■□□□□ 0.23
MKS1-202ENST00000393119 ACTN1P12814 892 aa16.46■□□□□ 0.23
MKS1-202ENST00000393119 GAP43P17677 238 aa16.46■□□□□ 0.23
MKS1-202ENST00000393119 MUTP22033 750 aa16.46■□□□□ 0.23
MKS1-202ENST00000393119 EDNRBP24530 442 aa16.46■□□□□ 0.23
MKS1-202ENST00000393119 SFNP31947 248 aa16.46■□□□□ 0.23
MKS1-202ENST00000393119 PTPN14Q15678 1187 aa16.46■□□□□ 0.23
MKS1-202ENST00000393119 MTERF2Q49AM1 385 aa16.46■□□□□ 0.23
MKS1-202ENST00000393119 TRIM59Q8IWR1 403 aa16.46■□□□□ 0.23
MKS1-202ENST00000393119 CCDC112Q8NEF3 446 aa16.46■□□□□ 0.23
MKS1-202ENST00000393119 ZBTB10Q96DT7 871 aa16.46■□□□□ 0.23
MKS1-202ENST00000393119 A0A0G2JMZ2 1700 aa16.46■□□□□ 0.23
MKS1-202ENST00000393119 SYNGAP1Q96PV0 1343 aa16.46■□□□□ 0.23
MKS1-202ENST00000393119 CETN3O15182 167 aa16.45■□□□□ 0.22
MKS1-202ENST00000393119 MAFGO15525 162 aa16.45■□□□□ 0.22
MKS1-202ENST00000393119 LYPLA2O95372 231 aa16.45■□□□□ 0.22
MKS1-202ENST00000393119 BMT2Q1RMZ1 405 aa16.45■□□□□ 0.22
MKS1-202ENST00000393119 DCAF17Q5H9S7 520 aaPredicted RBP16.45■□□□□ 0.22
MKS1-202ENST00000393119 SYT10Q6XYQ8 523 aa16.45■□□□□ 0.22
MKS1-202ENST00000393119 TYW1Q9NV66 732 aaKnown RBP16.45■□□□□ 0.22
MKS1-202ENST00000393119 CAPN11Q9UMQ6 739 aa16.45■□□□□ 0.22
MKS1-202ENST00000393119 LUC7L2Q9Y383 392 aaKnown RBP16.45■□□□□ 0.22
MKS1-202ENST00000393119 DNAH12Q6ZR08 3092 aa16.45■□□□□ 0.22
MKS1-202ENST00000393119 GSTTP1A0A1W2PQM5 241 aa16.45■□□□□ 0.22
MKS1-202ENST00000393119 PDXKO00764 312 aa16.45■□□□□ 0.22
MKS1-202ENST00000393119 FARP2O94887 1054 aaPredicted RBP16.45■□□□□ 0.22
MKS1-202ENST00000393119 PSAPP07602 524 aa16.45■□□□□ 0.22
MKS1-202ENST00000393119 GABPB1Q06547 395 aaPredicted RBP16.45■□□□□ 0.22
MKS1-202ENST00000393119 KCTD2Q14681 263 aa16.45■□□□□ 0.22
MKS1-202ENST00000393119 HSDL1Q3SXM5 330 aa16.45■□□□□ 0.22
MKS1-202ENST00000393119 FKBP15Q5T1M5 1219 aa16.45■□□□□ 0.22
MKS1-202ENST00000393119 TAF3Q5VWG9 929 aa16.45■□□□□ 0.22
MKS1-202ENST00000393119 CNGA4Q8IV77 575 aa16.45■□□□□ 0.22
MKS1-202ENST00000393119 ZC3H3Q8IXZ2 948 aaKnown RBP16.45■□□□□ 0.22
MKS1-202ENST00000393119 ERGIC2Q96RQ1 377 aa16.45■□□□□ 0.22
MKS1-202ENST00000393119 SENP7Q9BQF6 1050 aa16.45■□□□□ 0.22
MKS1-202ENST00000393119 NLRC4Q9NPP4 1024 aa16.45■□□□□ 0.22
MKS1-202ENST00000393119 XPNPEP1Q9NQW7 623 aa16.45■□□□□ 0.22
MKS1-202ENST00000393119 ODF2LQ9ULJ1 636 aa16.45■□□□□ 0.22
MKS1-202ENST00000393119 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.45■□□□□ 0.22
MKS1-202ENST00000393119 GGPS1O95749 300 aa16.44■□□□□ 0.22
MKS1-202ENST00000393119 SUPT20HL2P0C7V6 817 aa16.44■□□□□ 0.22
MKS1-202ENST00000393119 MARK3P27448 753 aa16.44■□□□□ 0.22
MKS1-202ENST00000393119 KCNH2Q12809 1159 aa16.44■□□□□ 0.22
MKS1-202ENST00000393119 STRA6Q9BX79 667 aa16.44■□□□□ 0.22
MKS1-202ENST00000393119 LZTFL1Q9NQ48 299 aa16.44■□□□□ 0.22
MKS1-202ENST00000393119 DNAJC25-GNG10A0A024R161 153 aa16.44■□□□□ 0.22
MKS1-202ENST00000393119 CCDC169A6NNP5 214 aa16.44■□□□□ 0.22
MKS1-202ENST00000393119 PPP1R37O75864 691 aa16.44■□□□□ 0.22
MKS1-202ENST00000393119 NOL4O94818 638 aa16.44■□□□□ 0.22
MKS1-202ENST00000393119 FGFR1OPO95684 399 aaKnown RBP16.44■□□□□ 0.22
MKS1-202ENST00000393119 EDRF1Q3B7T1 1238 aa16.44■□□□□ 0.22
MKS1-202ENST00000393119 TCERG1LQ5VWI1 586 aa16.44■□□□□ 0.22
MKS1-202ENST00000393119 TMEM143Q96AN5 459 aa16.44■□□□□ 0.22
MKS1-202ENST00000393119 CEP63Q96MT8 703 aa16.44■□□□□ 0.22
MKS1-202ENST00000393119 CBWD1Q9BRT8 395 aa16.44■□□□□ 0.22
MKS1-202ENST00000393119 AGPAT3Q9NRZ7 376 aa16.44■□□□□ 0.22
MKS1-202ENST00000393119 DDX41Q9UJV9 622 aaKnown RBP16.44■□□□□ 0.22
MKS1-202ENST00000393119 NFASCO94856 1347 aa16.44■□□□□ 0.22
MKS1-202ENST00000393119 ADGRA3Q8IWK6 1321 aa16.44■□□□□ 0.22
MKS1-202ENST00000393119 LRRN2O75325 713 aa16.43■□□□□ 0.22
MKS1-202ENST00000393119 SLC25A27O95847 323 aa16.43■□□□□ 0.22
MKS1-202ENST00000393119 PLS3P13797 630 aa16.43■□□□□ 0.22
MKS1-202ENST00000393119 SLC9A1P19634 815 aa16.43■□□□□ 0.22
MKS1-202ENST00000393119 ICAM3P32942 547 aa16.43■□□□□ 0.22
MKS1-202ENST00000393119 SYCP3Q8IZU3 236 aa16.43■□□□□ 0.22
MKS1-202ENST00000393119 FAM84AQ96KN4 292 aa16.43■□□□□ 0.22
MKS1-202ENST00000393119 TRIM10Q9UDY6 481 aa16.43■□□□□ 0.22
MKS1-202ENST00000393119 ADGRG1Q9Y653 693 aa16.43■□□□□ 0.22
MKS1-202ENST00000393119 FAM170AA1A519 330 aa16.43■□□□□ 0.22
MKS1-202ENST00000393119 CALUO43852 315 aaPredicted RBP16.43■□□□□ 0.22
MKS1-202ENST00000393119 TRIM49P0CI25 452 aa16.43■□□□□ 0.22
MKS1-202ENST00000393119 TRIM49CP0CI26 452 aa16.43■□□□□ 0.22
MKS1-202ENST00000393119 SPRYD7Q5W111 196 aa16.43■□□□□ 0.22
MKS1-202ENST00000393119 TRIM65Q6PJ69 517 aa16.43■□□□□ 0.22
MKS1-202ENST00000393119 HAUS6Q7Z4H7 955 aa16.43■□□□□ 0.22
MKS1-202ENST00000393119 KCTD17Q8N5Z5 321 aa16.43■□□□□ 0.22
MKS1-202ENST00000393119 C2orf69Q8N8R5 385 aa16.43■□□□□ 0.22
MKS1-202ENST00000393119 OR8K1Q8NGG5 319 aa16.43■□□□□ 0.22
MKS1-202ENST00000393119 ZNF302Q9NR11 478 aa16.43■□□□□ 0.22
MKS1-202ENST00000393119 REXO2Q9Y3B8 237 aaKnown RBP16.43■□□□□ 0.22
MKS1-202ENST00000393119 GOLGA8IPA6NC78 632 aa16.42■□□□□ 0.22
MKS1-202ENST00000393119 GOLGA8JA6NMD2 632 aa16.42■□□□□ 0.22
MKS1-202ENST00000393119 ANKRD63C9JTQ0 380 aa16.42■□□□□ 0.22
MKS1-202ENST00000393119 NRDCO43847 1150 aa16.42■□□□□ 0.22
MKS1-202ENST00000393119 ITGBL1O95965 494 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms