RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 SLC18A3Q16572 532 aa11.43□□□□□ -0.58
CALD1-203ENST00000393118 KRT71Q3SY84 523 aa11.43□□□□□ -0.58
CALD1-203ENST00000393118 NAIF1Q69YI7 327 aaPredicted RBP11.43□□□□□ -0.58
CALD1-203ENST00000393118 ZNF746Q6NUN9 644 aaPredicted RBP11.43□□□□□ -0.58
CALD1-203ENST00000393118 PHLDB2Q86SQ0 1253 aa11.43□□□□□ -0.58
CALD1-203ENST00000393118 TACO1Q9BSH4 297 aaKnown RBP11.43□□□□□ -0.58
CALD1-203ENST00000393118 RBM12Q9NTZ6 932 aaKnown RBP11.43□□□□□ -0.58
CALD1-203ENST00000393118 FAM86B1E9PN63 330 aa11.43□□□□□ -0.58
CALD1-203ENST00000393118 ZRANB2O95218 330 aaKnown RBP eCLIP11.43□□□□□ -0.58
CALD1-203ENST00000393118 FAM86B2P0C5J1 330 aa11.43□□□□□ -0.58
CALD1-203ENST00000393118 CETN2P41208 172 aa11.43□□□□□ -0.58
CALD1-203ENST00000393118 PTK2Q05397 1052 aa11.43□□□□□ -0.58
CALD1-203ENST00000393118 POMGNT1Q8WZA1 660 aa11.43□□□□□ -0.58
CALD1-203ENST00000393118 DDX47Q9H0S4 455 aaKnown RBP11.43□□□□□ -0.58
CALD1-203ENST00000393118 L1RE1Q9UN81 338 aa11.43□□□□□ -0.58
CALD1-203ENST00000393118 ROBO1Q9Y6N7 1651 aa11.43□□□□□ -0.58
CALD1-203ENST00000393118 PGRMC1O00264 195 aaKnown RBP11.43□□□□□ -0.58
CALD1-203ENST00000393118 ZBTB39O15060 712 aa11.43□□□□□ -0.58
CALD1-203ENST00000393118 HNRNPH1P31943 449 aaKnown RBP11.43□□□□□ -0.58
CALD1-203ENST00000393118 DRAP1Q14919 205 aaPredicted RBP11.43□□□□□ -0.58
CALD1-203ENST00000393118 RBBP5Q15291 538 aaKnown RBP11.43□□□□□ -0.58
CALD1-203ENST00000393118 UBL4BQ8N7F7 174 aa11.43□□□□□ -0.58
CALD1-203ENST00000393118 LRRC45Q96CN5 670 aa11.43□□□□□ -0.58
CALD1-203ENST00000393118 IFT74Q96LB3 600 aa11.43□□□□□ -0.58
CALD1-203ENST00000393118 DMGDHQ9UI17 866 aaKnown RBP11.43□□□□□ -0.58
CALD1-203ENST00000393118 EXOC7Q9UPT5 735 aa11.43□□□□□ -0.58
CALD1-203ENST00000393118 SSU72P8A0A1W2PR75 194 aa11.42□□□□□ -0.58
CALD1-203ENST00000393118 LRRIQ3A6PVS8 624 aaPredicted RBP11.42□□□□□ -0.58
CALD1-203ENST00000393118 MYZAPP0CAP1 466 aa11.42□□□□□ -0.58
CALD1-203ENST00000393118 RXRBP28702 533 aa11.42□□□□□ -0.58
CALD1-203ENST00000393118 MCF2L2Q86YR7 1114 aa11.42□□□□□ -0.58
CALD1-203ENST00000393118 CCDC105Q8IYK2 499 aa11.42□□□□□ -0.58
CALD1-203ENST00000393118 RNF10Q8N5U6 811 aaKnown RBP11.42□□□□□ -0.58
CALD1-203ENST00000393118 PAIP2Q9BPZ3 127 aaKnown RBP11.42□□□□□ -0.58
CALD1-203ENST00000393118 PLVAPQ9BX97 442 aa11.42□□□□□ -0.58
CALD1-203ENST00000393118 FGFBP2Q9BYJ0 223 aa11.42□□□□□ -0.58
CALD1-203ENST00000393118 PPANQ9NQ55 473 aaKnown RBP11.42□□□□□ -0.58
CALD1-203ENST00000393118 DUOX1Q9NRD9 1551 aa11.42□□□□□ -0.58
CALD1-203ENST00000393118 PDXKO00764 312 aa11.42□□□□□ -0.58
CALD1-203ENST00000393118 HNRNPDLO14979 420 aaKnown RBP11.42□□□□□ -0.58
CALD1-203ENST00000393118 DPH6Q7L8W6 267 aa11.42□□□□□ -0.58
CALD1-203ENST00000393118 KIRREL3Q8IZU9 778 aa11.42□□□□□ -0.58
CALD1-203ENST00000393118 MTMR8Q96EF0 704 aa11.42□□□□□ -0.58
CALD1-203ENST00000393118 SERPINA10Q9UK55 444 aa11.42□□□□□ -0.58
CALD1-203ENST00000393118 USTQ9Y2C2 406 aa11.42□□□□□ -0.58
CALD1-203ENST00000393118 MYO5AQ9Y4I1 1855 aaKnown RBP11.42□□□□□ -0.58
CALD1-203ENST00000393118 LMNB1P20700 586 aa11.42□□□□□ -0.58
CALD1-203ENST00000393118 ELF1P32519 619 aa11.42□□□□□ -0.58
CALD1-203ENST00000393118 VPS41P49754 854 aa11.42□□□□□ -0.58
CALD1-203ENST00000393118 CASP5P51878 434 aa11.42□□□□□ -0.58
CALD1-203ENST00000393118 GIT2Q14161 759 aa11.42□□□□□ -0.58
CALD1-203ENST00000393118 FAM160B2Q86V87 743 aa11.42□□□□□ -0.58
CALD1-203ENST00000393118 LRRC15Q8TF66 581 aa11.42□□□□□ -0.58
CALD1-203ENST00000393118 AGBL1Q96MI9 1066 aa11.42□□□□□ -0.58
CALD1-203ENST00000393118 NAP1L3Q99457 506 aaPredicted RBP11.42□□□□□ -0.58
CALD1-203ENST00000393118 FAM198AQ9UFP1 575 aa11.42□□□□□ -0.58
CALD1-203ENST00000393118 HERC5Q9UII4 1024 aaKnown RBP11.42□□□□□ -0.58
CALD1-203ENST00000393118 KCNG1Q9UIX4 513 aa11.42□□□□□ -0.58
CALD1-203ENST00000393118 MTUS1Q9ULD2 1270 aa11.42□□□□□ -0.58
CALD1-203ENST00000393118 SLC16A4O15374 487 aa11.41□□□□□ -0.58
CALD1-203ENST00000393118 HIP1RO75146 1068 aa11.41□□□□□ -0.58
CALD1-203ENST00000393118 MXI1P50539 228 aa11.41□□□□□ -0.58
CALD1-203ENST00000393118 IFT88Q13099 833 aa11.41□□□□□ -0.58
CALD1-203ENST00000393118 ZNF211Q13398 564 aaPredicted RBP11.41□□□□□ -0.58
CALD1-203ENST00000393118 MTMR1Q13613 665 aa11.41□□□□□ -0.58
CALD1-203ENST00000393118 TNFAIP1Q13829 316 aa11.41□□□□□ -0.58
CALD1-203ENST00000393118 TMEM119Q4V9L6 283 aa11.41□□□□□ -0.58
CALD1-203ENST00000393118 WDR44Q5JSH3 913 aa11.41□□□□□ -0.58
CALD1-203ENST00000393118 CCNI2Q6ZMN8 369 aaPredicted RBP11.41□□□□□ -0.58
CALD1-203ENST00000393118 FRMD5Q7Z6J6 570 aa11.41□□□□□ -0.58
CALD1-203ENST00000393118 SYT2Q8N9I0 419 aaPredicted RBP11.41□□□□□ -0.58
CALD1-203ENST00000393118 MSANTD4Q8NCY6 345 aa11.41□□□□□ -0.58
CALD1-203ENST00000393118 CEP170P1Q96L14 293 aa11.41□□□□□ -0.58
CALD1-203ENST00000393118 EDEM3Q9BZQ6 932 aa11.41□□□□□ -0.58
CALD1-203ENST00000393118 DOT1LQ8TEK3 1739 aa11.41□□□□□ -0.58
CALD1-203ENST00000393118 CTNNA2P26232 953 aa11.41□□□□□ -0.58
CALD1-203ENST00000393118 GABPAQ06546 454 aa11.41□□□□□ -0.58
CALD1-203ENST00000393118 KCNA1Q09470 495 aa11.41□□□□□ -0.58
CALD1-203ENST00000393118 DMP1Q13316 513 aaPredicted RBP11.41□□□□□ -0.58
CALD1-203ENST00000393118 MEA1Q16626 185 aa11.41□□□□□ -0.58
CALD1-203ENST00000393118 FIGNQ5HY92 759 aa11.41□□□□□ -0.58
CALD1-203ENST00000393118 PIK3R5Q8WYR1 880 aa11.41□□□□□ -0.58
CALD1-203ENST00000393118 RMDN3Q96TC7 470 aa11.41□□□□□ -0.58
CALD1-203ENST00000393118 IMPG2Q9BZV3 1241 aa11.41□□□□□ -0.58
CALD1-203ENST00000393118 ZNF70Q9UC06 446 aaPredicted RBP11.41□□□□□ -0.58
CALD1-203ENST00000393118 AKAP3O75969 853 aa11.41□□□□□ -0.58
CALD1-203ENST00000393118 FGGP02679 453 aa11.41□□□□□ -0.58
CALD1-203ENST00000393118 PLCB3Q01970 1234 aa11.41□□□□□ -0.58
CALD1-203ENST00000393118 MAP2K1Q02750 393 aaPredicted RBP11.41□□□□□ -0.58
CALD1-203ENST00000393118 KCTD19Q17RG1 926 aaPredicted RBP11.41□□□□□ -0.58
CALD1-203ENST00000393118 EDRF1Q3B7T1 1238 aa11.41□□□□□ -0.58
CALD1-203ENST00000393118 PAPD7Q5XG87 772 aaKnown RBP11.41□□□□□ -0.58
CALD1-203ENST00000393118 ARFGAP2Q8N6H7 521 aa11.41□□□□□ -0.58
CALD1-203ENST00000393118 HDAC7Q8WUI4 952 aa11.41□□□□□ -0.58
CALD1-203ENST00000393118 KIFAP3Q92845 792 aa11.41□□□□□ -0.58
CALD1-203ENST00000393118 ROBO3Q96MS0 1386 aa11.41□□□□□ -0.58
CALD1-203ENST00000393118 MYH7P12883 1935 aa11.41□□□□□ -0.58
CALD1-203ENST00000393118 M0R2N6 131 aa11.4□□□□□ -0.58
CALD1-203ENST00000393118 PDE2AO00408 941 aaPredicted RBP11.4□□□□□ -0.58
CALD1-203ENST00000393118 CHUKO15111 745 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms